Back to Multiple platform build/check report for BioC 3.13 |
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This page was generated on 2021-10-15 15:06:15 -0400 (Fri, 15 Oct 2021).
To the developers/maintainers of the PAST package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/PAST.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
Package 1346/2041 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
PAST 1.8.0 (landing page) Thrash Adam
| nebbiolo1 | Linux (Ubuntu 20.04.2 LTS) / x86_64 | OK | OK | WARNINGS | |||||||||
tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | WARNINGS | OK | |||||||||
machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | WARNINGS | OK | |||||||||
Package: PAST |
Version: 1.8.0 |
Command: rm -rf PAST.buildbin-libdir && mkdir PAST.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=PAST.buildbin-libdir PAST_1.8.0.tar.gz |
StartedAt: 2021-10-15 10:52:44 -0400 (Fri, 15 Oct 2021) |
EndedAt: 2021-10-15 10:53:58 -0400 (Fri, 15 Oct 2021) |
EllapsedTime: 73.7 seconds |
RetCode: 0 |
Status: OK |
PackageFile: PAST_1.8.0.zip |
PackageFileSize: 1023 KiB |
############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf PAST.buildbin-libdir && mkdir PAST.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=PAST.buildbin-libdir PAST_1.8.0.tar.gz ### ############################################################################## ############################################################################## install for i386 * installing *source* package 'PAST' ... ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading Warning: replacing previous import 'S4Vectors::union' by 'dplyr::union' when loading 'PAST' Warning: replacing previous import 'S4Vectors::intersect' by 'dplyr::intersect' when loading 'PAST' Warning: replacing previous import 'S4Vectors::setdiff' by 'dplyr::setdiff' when loading 'PAST' Warning: replacing previous import 'S4Vectors::first' by 'dplyr::first' when loading 'PAST' Warning: replacing previous import 'S4Vectors::setequal' by 'dplyr::setequal' when loading 'PAST' Warning: replacing previous import 'S4Vectors::rename' by 'dplyr::rename' when loading 'PAST' Warning: replacing previous import 'S4Vectors::tail' by 'utils::tail' when loading 'PAST' Warning: replacing previous import 'S4Vectors::stack' by 'utils::stack' when loading 'PAST' Warning: replacing previous import 'S4Vectors::head' by 'utils::head' when loading 'PAST' Warning: replacing previous import 'S4Vectors::complete.cases' by 'stats::complete.cases' when loading 'PAST' Warning: replacing previous import 'S4Vectors::sd' by 'stats::sd' when loading 'PAST' ** help *** installing help indices converting help for package 'PAST' finding HTML links ... done assign_SNPs_to_genes html assign_chunk html determine_linkage html find_pathway_significance html find_representative_SNP html find_representative_SNP_gene_pairing html load_GWAS_data html load_LD html plot_pathways html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location Warning: replacing previous import 'S4Vectors::union' by 'dplyr::union' when loading 'PAST' Warning: replacing previous import 'S4Vectors::intersect' by 'dplyr::intersect' when loading 'PAST' Warning: replacing previous import 'S4Vectors::setdiff' by 'dplyr::setdiff' when loading 'PAST' Warning: replacing previous import 'S4Vectors::first' by 'dplyr::first' when loading 'PAST' Warning: replacing previous import 'S4Vectors::setequal' by 'dplyr::setequal' when loading 'PAST' Warning: replacing previous import 'S4Vectors::rename' by 'dplyr::rename' when loading 'PAST' Warning: replacing previous import 'S4Vectors::tail' by 'utils::tail' when loading 'PAST' Warning: replacing previous import 'S4Vectors::stack' by 'utils::stack' when loading 'PAST' Warning: replacing previous import 'S4Vectors::head' by 'utils::head' when loading 'PAST' Warning: replacing previous import 'S4Vectors::complete.cases' by 'stats::complete.cases' when loading 'PAST' Warning: replacing previous import 'S4Vectors::sd' by 'stats::sd' when loading 'PAST' ** testing if installed package can be loaded from final location Warning: replacing previous import 'S4Vectors::union' by 'dplyr::union' when loading 'PAST' Warning: replacing previous import 'S4Vectors::intersect' by 'dplyr::intersect' when loading 'PAST' Warning: replacing previous import 'S4Vectors::setdiff' by 'dplyr::setdiff' when loading 'PAST' Warning: replacing previous import 'S4Vectors::first' by 'dplyr::first' when loading 'PAST' Warning: replacing previous import 'S4Vectors::setequal' by 'dplyr::setequal' when loading 'PAST' Warning: replacing previous import 'S4Vectors::rename' by 'dplyr::rename' when loading 'PAST' Warning: replacing previous import 'S4Vectors::tail' by 'utils::tail' when loading 'PAST' Warning: replacing previous import 'S4Vectors::stack' by 'utils::stack' when loading 'PAST' Warning: replacing previous import 'S4Vectors::head' by 'utils::head' when loading 'PAST' Warning: replacing previous import 'S4Vectors::complete.cases' by 'stats::complete.cases' when loading 'PAST' Warning: replacing previous import 'S4Vectors::sd' by 'stats::sd' when loading 'PAST' ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'PAST' ... ** testing if installed package can be loaded Warning: replacing previous import 'S4Vectors::union' by 'dplyr::union' when loading 'PAST' Warning: replacing previous import 'S4Vectors::intersect' by 'dplyr::intersect' when loading 'PAST' Warning: replacing previous import 'S4Vectors::setdiff' by 'dplyr::setdiff' when loading 'PAST' Warning: replacing previous import 'S4Vectors::first' by 'dplyr::first' when loading 'PAST' Warning: replacing previous import 'S4Vectors::setequal' by 'dplyr::setequal' when loading 'PAST' Warning: replacing previous import 'S4Vectors::rename' by 'dplyr::rename' when loading 'PAST' Warning: replacing previous import 'S4Vectors::tail' by 'utils::tail' when loading 'PAST' Warning: replacing previous import 'S4Vectors::stack' by 'utils::stack' when loading 'PAST' Warning: replacing previous import 'S4Vectors::head' by 'utils::head' when loading 'PAST' Warning: replacing previous import 'S4Vectors::complete.cases' by 'stats::complete.cases' when loading 'PAST' Warning: replacing previous import 'S4Vectors::sd' by 'stats::sd' when loading 'PAST' * MD5 sums packaged installation of 'PAST' as PAST_1.8.0.zip * DONE (PAST)