Back to Multiple platform build/check report for BioC 3.13 |
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This page was generated on 2021-10-15 15:06:10 -0400 (Fri, 15 Oct 2021).
To the developers/maintainers of the MAST package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/MAST.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
Package 1041/2041 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
MAST 1.18.0 (landing page) Andrew McDavid
| nebbiolo1 | Linux (Ubuntu 20.04.2 LTS) / x86_64 | OK | OK | OK | |||||||||
tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | |||||||||
machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | |||||||||
Package: MAST |
Version: 1.18.0 |
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/MAST_1.18.0.tar.gz && rm -rf MAST.buildbin-libdir && mkdir MAST.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=MAST.buildbin-libdir MAST_1.18.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL MAST_1.18.0.zip && rm MAST_1.18.0.tar.gz MAST_1.18.0.zip |
StartedAt: 2021-10-14 08:58:14 -0400 (Thu, 14 Oct 2021) |
EndedAt: 2021-10-14 08:59:23 -0400 (Thu, 14 Oct 2021) |
EllapsedTime: 69.5 seconds |
RetCode: 0 |
Status: OK |
############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/MAST_1.18.0.tar.gz && rm -rf MAST.buildbin-libdir && mkdir MAST.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=MAST.buildbin-libdir MAST_1.18.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL MAST_1.18.0.zip && rm MAST_1.18.0.tar.gz MAST_1.18.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 60 3837k 60 2340k 0 0 2671k 0 0:00:01 --:--:-- 0:00:01 2671k 100 3837k 100 3837k 0 0 3023k 0 0:00:01 0:00:01 --:--:-- 3026k install for i386 * installing *source* package 'MAST' ... ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'MAST' finding HTML links ... done BayesGLMlike-class html CovFromBoots html Drop html FromFlatDF html FromMatrix html GLMlike-class html GSEATests-class html Hypothesis html LMERlike-class html LMlike-class html LRT html MAST-defunct html finding level-2 HTML links ... done MAST-package html SceToSingleCellAssay html ZlmFit-class html applyFlat html bootVcov1 html calcZ html colData-set-SingleCellAssay-DataFrame-method html collectResiduals html computeEtFromCt html convertMASTClassicToSingleCellAssay html defaultAssay html defaultPrior html dof html ebayes html expavg html filterLowExpressedGenes html fit html freq html getConcordance html getwellKey html gseaAfterBoot html hushWarning html impute html influence.bayesglm html invlogit html logFC html logmean html lrTest-ZlmFit-character-method html lrTest html maits-dataset html mast_filter html melt.SingleCellAssay html model.matrix-set html model.matrix html myBiplot html plot.thresholdSCRNACountMatrix html plotSCAConcordance html plotlrt html predict.ZlmFit html predicted_sig-dataset html primerAverage html print.summaryZlmFit html read.fluidigm html removeResponse html rstandard.bayesglm html se.coef html show html split-SingleCellAssay-character-method html stat_ell html subset-SingleCellAssay-method html summarize html summary-GSEATests-method html summary-ZlmFit-method html summary.thresholdSCRNACountMatrix html thresholdSCRNACountMatrix html vbeta-dataset html vbetaFA-dataset html waldTest-ZlmFit-matrix-method html waldTest html xform html zlm html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'MAST' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'MAST' as MAST_1.18.0.zip * DONE (MAST) * installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library' package 'MAST' successfully unpacked and MD5 sums checked