Back to Multiple platform build/check report for BioC 3.13 |
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This page was generated on 2021-10-15 15:06:10 -0400 (Fri, 15 Oct 2021).
To the developers/maintainers of the LymphoSeq package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/LymphoSeq.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
Package 1009/2041 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
LymphoSeq 1.20.0 (landing page) David Coffey
| nebbiolo1 | Linux (Ubuntu 20.04.2 LTS) / x86_64 | OK | OK | OK | |||||||||
tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | |||||||||
machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | |||||||||
Package: LymphoSeq |
Version: 1.20.0 |
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/LymphoSeq_1.20.0.tar.gz && rm -rf LymphoSeq.buildbin-libdir && mkdir LymphoSeq.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=LymphoSeq.buildbin-libdir LymphoSeq_1.20.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL LymphoSeq_1.20.0.zip && rm LymphoSeq_1.20.0.tar.gz LymphoSeq_1.20.0.zip |
StartedAt: 2021-10-14 09:37:15 -0400 (Thu, 14 Oct 2021) |
EndedAt: 2021-10-14 09:38:20 -0400 (Thu, 14 Oct 2021) |
EllapsedTime: 65.0 seconds |
RetCode: 0 |
Status: OK |
############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/LymphoSeq_1.20.0.tar.gz && rm -rf LymphoSeq.buildbin-libdir && mkdir LymphoSeq.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=LymphoSeq.buildbin-libdir LymphoSeq_1.20.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL LymphoSeq_1.20.0.zip && rm LymphoSeq_1.20.0.tar.gz LymphoSeq_1.20.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 100 710k 100 710k 0 0 1884k 0 --:--:-- --:--:-- --:--:-- 1890k install for i386 * installing *source* package 'LymphoSeq' ... ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'LymphoSeq' finding HTML links ... done alignSeq html bhattacharyyaCoefficient html bhattacharyyaMatrix html chordDiagramVDJ html clonalRelatedness html clonality html cloneTrack html commonSeqs html commonSeqsBar html commonSeqsPlot html commonSeqsVenn html differentialAbundance html exportFasta html geneFreq html lorenzCurve html mergeFiles html pairwisePlot html phyloTree html productive html productiveSeq html readImmunoSeq html removeSeq html searchPublished html searchSeq html seqMatrix html similarityMatrix html similarityScore html topFreq html topSeqs html topSeqsPlot html uniqueSeqs html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'LymphoSeq' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'LymphoSeq' as LymphoSeq_1.20.0.zip * DONE (LymphoSeq) * installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library' package 'LymphoSeq' successfully unpacked and MD5 sums checked