| Back to Multiple platform build/check report for BioC 3.13 |
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This page was generated on 2021-10-15 15:06:09 -0400 (Fri, 15 Oct 2021).
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To the developers/maintainers of the ISAnalytics package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/ISAnalytics.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 944/2041 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| ISAnalytics 1.2.1 (landing page) Andrea Calabria
| nebbiolo1 | Linux (Ubuntu 20.04.2 LTS) / x86_64 | OK | OK | OK |  | ||||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | ERROR | OK | |||||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: ISAnalytics |
| Version: 1.2.1 |
| Command: C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/ISAnalytics_1.2.1.tar.gz && rm -rf ISAnalytics.buildbin-libdir && mkdir ISAnalytics.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=ISAnalytics.buildbin-libdir ISAnalytics_1.2.1.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL ISAnalytics_1.2.1.zip && rm ISAnalytics_1.2.1.tar.gz ISAnalytics_1.2.1.zip |
| StartedAt: 2021-10-14 09:56:06 -0400 (Thu, 14 Oct 2021) |
| EndedAt: 2021-10-14 09:57:08 -0400 (Thu, 14 Oct 2021) |
| EllapsedTime: 62.5 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/ISAnalytics_1.2.1.tar.gz && rm -rf ISAnalytics.buildbin-libdir && mkdir ISAnalytics.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=ISAnalytics.buildbin-libdir ISAnalytics_1.2.1.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL ISAnalytics_1.2.1.zip && rm ISAnalytics_1.2.1.tar.gz ISAnalytics_1.2.1.zip
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install for i386
* installing *source* package 'ISAnalytics' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'ISAnalytics'
finding HTML links ... done
CIS_grubbs html
CIS_volcano_plot html
HSC_population_plot html
HSC_population_size_estimate html
ISAnalytics html
aggregate_metadata html
aggregate_values_by_key html
annotation_IS_vars html
as_sparse_matrix html
association_file_columns html
available_outlier_tests html
blood_lineages_default html
clinical_relevant_suspicious_genes html
comparison_matrix html
compute_abundance html
compute_near_integrations html
cumulative_count_union html
date_columns_coll html
date_formats html
default_iss_file_prefixes html
default_meta_agg html
default_stats html
generate_Vispa2_launch_AF html
generate_blank_association_file html
import_Vispa2_stats html
import_association_file html
import_parallel_Vispa2Matrices_auto html
import_parallel_Vispa2Matrices_interactive
html
import_single_Vispa2Matrix html
known_clinical_oncogenes html
mandatory_IS_vars html
matching_options html
outlier_filter html
outliers_by_pool_fragments html
quantification_types html
realign_after_collisions html
reduced_AF_columns html
remove_collisions html
sample_statistics html
separate_quant_matrices html
threshold_filter html
top_integrations html
unzip_file_system html
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'ISAnalytics' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'ISAnalytics' as ISAnalytics_1.2.1.zip
* DONE (ISAnalytics)
* installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library'
package 'ISAnalytics' successfully unpacked and MD5 sums checked