Back to Multiple platform build/check report for BioC 3.13 |
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This page was generated on 2021-10-15 15:06:07 -0400 (Fri, 15 Oct 2021).
To the developers/maintainers of the HEM package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/HEM.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
Package 851/2041 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
HEM 1.64.0 (landing page) HyungJun Cho
| nebbiolo1 | Linux (Ubuntu 20.04.2 LTS) / x86_64 | OK | OK | OK | |||||||||
tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | |||||||||
machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | |||||||||
Package: HEM |
Version: 1.64.0 |
Command: rm -rf HEM.buildbin-libdir && mkdir HEM.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=HEM.buildbin-libdir HEM_1.64.0.tar.gz |
StartedAt: 2021-10-15 09:46:52 -0400 (Fri, 15 Oct 2021) |
EndedAt: 2021-10-15 09:48:25 -0400 (Fri, 15 Oct 2021) |
EllapsedTime: 92.5 seconds |
RetCode: 0 |
Status: OK |
PackageFile: HEM_1.64.0.zip |
PackageFileSize: 685.4 KiB |
############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf HEM.buildbin-libdir && mkdir HEM.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=HEM.buildbin-libdir HEM_1.64.0.tar.gz ### ############################################################################## ############################################################################## install for i386 * installing *source* package 'HEM' ... ** using staged installation ** libs "C:/rtools40/mingw32/bin/"gcc -I"C:/Users/BIOCBU~1/BBS-3~1.13-/R/include" -DNDEBUG -I"c:/extsoft/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c hem.c -o hem.o hem.c: In function 'onelayerhem': hem.c:1390:12: warning: variable 'k' set but not used [-Wunused-but-set-variable] int i, j, k, m, n; ^ hem.c: In function 'chk_prt': hem.c:1593:16: warning: variable 'l' set but not used [-Wunused-but-set-variable] int i, j, k, l; ^ C:/rtools40/mingw32/bin/gcc -shared -s -static-libgcc -o HEM.dll tmp.def hem.o -Lc:/extsoft/lib/i386 -Lc:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.13-/R/bin/i386 -lR installing to C:/Users/biocbuild/bbs-3.13-bioc/meat/HEM.buildbin-libdir/00LOCK-HEM/00new/HEM/libs/i386 ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'HEM' finding HTML links ... done am.tran html am.tran.half html base.ASE.Olig html base.PSE.Olig html base.error.Olig html base.error.Olig.quanOnly html boot.base.ASE.Olig html boot.base.PSE.Olig html boot.base.error.Olig html fixbound.predict.smooth.spline html hem html hem.eb.prior html hem.fdr html hem.null.no html hem.null.one html hem.null.two html hem.preproc html mubcp html nonpar.error.Olig html nonpar.no.error.Olig html nonpar.rep.error.Olig html par.error.Olig html par.no.error.Olig html par.rep.error.Olig html pbrain html permut html quant.norm html quant.normal html quant.normal2 html quant.normalize html remove.sig.genes html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'HEM' ... ** libs "C:/rtools40/mingw64/bin/"gcc -I"C:/Users/BIOCBU~1/BBS-3~1.13-/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c hem.c -o hem.o hem.c: In function 'onelayerhem': hem.c:1390:12: warning: variable 'k' set but not used [-Wunused-but-set-variable] int i, j, k, m, n; ^ hem.c: In function 'chk_prt': hem.c:1593:16: warning: variable 'l' set but not used [-Wunused-but-set-variable] int i, j, k, l; ^ C:/rtools40/mingw64/bin/gcc -shared -s -static-libgcc -o HEM.dll tmp.def hem.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.13-/R/bin/x64 -lR installing to C:/Users/biocbuild/bbs-3.13-bioc/meat/HEM.buildbin-libdir/HEM/libs/x64 ** testing if installed package can be loaded * MD5 sums packaged installation of 'HEM' as HEM_1.64.0.zip * DONE (HEM)