| Back to Multiple platform build/check report for BioC 3.13 |
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This page was generated on 2021-10-15 15:06:06 -0400 (Fri, 15 Oct 2021).
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To the developers/maintainers of the GeomxTools package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/GeomxTools.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 756/2041 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| GeomxTools 1.0.0 (landing page) Nicole Ortogero
| nebbiolo1 | Linux (Ubuntu 20.04.2 LTS) / x86_64 | OK | OK | OK |  | ||||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | | ||||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: GeomxTools |
| Version: 1.0.0 |
| Command: C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/GeomxTools_1.0.0.tar.gz && rm -rf GeomxTools.buildbin-libdir && mkdir GeomxTools.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=GeomxTools.buildbin-libdir GeomxTools_1.0.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL GeomxTools_1.0.0.zip && rm GeomxTools_1.0.0.tar.gz GeomxTools_1.0.0.zip |
| StartedAt: 2021-10-14 10:02:42 -0400 (Thu, 14 Oct 2021) |
| EndedAt: 2021-10-14 10:06:19 -0400 (Thu, 14 Oct 2021) |
| EllapsedTime: 216.4 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/GeomxTools_1.0.0.tar.gz && rm -rf GeomxTools.buildbin-libdir && mkdir GeomxTools.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=GeomxTools.buildbin-libdir GeomxTools_1.0.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL GeomxTools_1.0.0.zip && rm GeomxTools_1.0.0.tar.gz GeomxTools_1.0.0.zip
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0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
19 3220k 19 619k 0 0 1273k 0 0:00:02 --:--:-- 0:00:02 1272k
92 3220k 92 2991k 0 0 2016k 0 0:00:01 0:00:01 --:--:-- 2017k
100 3220k 100 3220k 0 0 2067k 0 0:00:01 0:00:01 --:--:-- 2067k
install for i386
* installing *source* package 'GeomxTools' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'GeomxTools'
finding HTML links ... done
NanoStringGeomxSet-class html
finding level-2 HTML links ... done
readDccFile html
readNanoStringGeomxSet html
readPKCFile html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'GeomxTools' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'GeomxTools' as GeomxTools_1.0.0.zip
* DONE (GeomxTools)
* installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library'
package 'GeomxTools' successfully unpacked and MD5 sums checked