Zachary Skidmore
| Snapshot Date: 2021-10-14 04:50:12 -0400 (Thu, 14 Oct 2021) |
| git_url: https://git.bioconductor.org/packages/GenVisR |
| git_branch: RELEASE_3_13 |
| git_last_commit: 3b6abcf |
| git_last_commit_date: 2021-05-19 12:17:38 -0400 (Wed, 19 May 2021) |
| Back to Multiple platform build/check report for BioC 3.13 |
|
This page was generated on 2021-10-15 15:06:06 -0400 (Fri, 15 Oct 2021).
|
To the developers/maintainers of the GenVisR package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/GenVisR.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 753/2041 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| GenVisR 1.24.0 (landing page) Zachary Skidmore
| nebbiolo1 | Linux (Ubuntu 20.04.2 LTS) / x86_64 | OK | OK | ERROR | |||||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | | ||||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: GenVisR |
| Version: 1.24.0 |
| Command: C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/GenVisR_1.24.0.tar.gz && rm -rf GenVisR.buildbin-libdir && mkdir GenVisR.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=GenVisR.buildbin-libdir GenVisR_1.24.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL GenVisR_1.24.0.zip && rm GenVisR_1.24.0.tar.gz GenVisR_1.24.0.zip |
| StartedAt: 2021-10-14 10:41:26 -0400 (Thu, 14 Oct 2021) |
| EndedAt: 2021-10-14 10:43:07 -0400 (Thu, 14 Oct 2021) |
| EllapsedTime: 101.1 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/GenVisR_1.24.0.tar.gz && rm -rf GenVisR.buildbin-libdir && mkdir GenVisR.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=GenVisR.buildbin-libdir GenVisR_1.24.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL GenVisR_1.24.0.zip && rm GenVisR_1.24.0.tar.gz GenVisR_1.24.0.zip
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34 2098k 34 718k 0 0 1912k 0 0:00:01 --:--:-- 0:00:01 1910k
100 2098k 100 2098k 0 0 3093k 0 --:--:-- --:--:-- --:--:-- 3095k
install for i386
* installing *source* package 'GenVisR' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'GenVisR'
finding HTML links ... done
Clinical-class html
GMS-class html
GMS_Virtual-class html
GMS_v4-class html
GenVisR html
HCC1395_Germline html
HCC1395_N html
HCC1395_T html
Lolliplot-class html
LucCNseg html
MutSpectra-class html
MutationAnnotationFormat-class html
MutationAnnotationFormat_Virtual-class
html
MutationAnnotationFormat_v1.0-class html
MutationAnnotationFormat_v2.0-class html
MutationAnnotationFormat_v2.1-class html
MutationAnnotationFormat_v2.2-class html
MutationAnnotationFormat_v2.3-class html
MutationAnnotationFormat_v2.4-class html
PIK3CA html
Rainfall-class html
SNPloci html
TvTi html
VEP-class html
VEP_Virtual-class html
VEP_v88-class html
Waterfall-class html
brcaMAF html
cnFreq html
cnSpec html
cnView html
compIdent html
covBars html
cytoGeno html
drawPlot-methods html
genCov html
geneViz html
getData-methods html
getDescription-methods html
getGrob-methods html
getHeader-methods html
getMeta-methods html
getMutation-methods html
getPath-methods html
getPosition-methods html
getSample-methods html
getVersion-methods html
hg19chr html
ideoView html
lohSpec html
lohView html
lolliplot html
REDIRECT:topic Previous alias or file overwritten by alias: C:/Users/biocbuild/bbs-3.13-bioc/meat/GenVisR.buildbin-libdir/00LOCK-GenVisR/00new/GenVisR/help/lolliplot.html
lolliplot_AA2sidechain html
lolliplot_buildMain html
waterfall html
REDIRECT:topic Previous alias or file overwritten by alias: C:/Users/biocbuild/bbs-3.13-bioc/meat/GenVisR.buildbin-libdir/00LOCK-GenVisR/00new/GenVisR/help/waterfall.html
writeData-methods html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'GenVisR' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'GenVisR' as GenVisR_1.24.0.zip
* DONE (GenVisR)
* installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library'
package 'GenVisR' successfully unpacked and MD5 sums checked