Back to Multiple platform build/check report for BioC 3.13 |
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This page was generated on 2021-10-15 15:06:03 -0400 (Fri, 15 Oct 2021).
To the developers/maintainers of the ELMER package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/ELMER.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
Package 565/2041 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
ELMER 2.16.0 (landing page) Tiago Chedraoui Silva
| nebbiolo1 | Linux (Ubuntu 20.04.2 LTS) / x86_64 | OK | OK | OK | |||||||||
tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | |||||||||
machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | |||||||||
Package: ELMER |
Version: 2.16.0 |
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/ELMER_2.16.0.tar.gz && rm -rf ELMER.buildbin-libdir && mkdir ELMER.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=ELMER.buildbin-libdir ELMER_2.16.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL ELMER_2.16.0.zip && rm ELMER_2.16.0.tar.gz ELMER_2.16.0.zip |
StartedAt: 2021-10-14 11:04:28 -0400 (Thu, 14 Oct 2021) |
EndedAt: 2021-10-14 11:07:54 -0400 (Thu, 14 Oct 2021) |
EllapsedTime: 205.9 seconds |
RetCode: 0 |
Status: OK |
############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/ELMER_2.16.0.tar.gz && rm -rf ELMER.buildbin-libdir && mkdir ELMER.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=ELMER.buildbin-libdir ELMER_2.16.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL ELMER_2.16.0.zip && rm ELMER_2.16.0.tar.gz ELMER_2.16.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 40 2933k 40 1190k 0 0 1771k 0 0:00:01 --:--:-- 0:00:01 1771k 100 2933k 100 2933k 0 0 2307k 0 0:00:01 0:00:01 --:--:-- 2308k install for i386 * installing *source* package 'ELMER' ... ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'ELMER' finding HTML links ... done ELMER html Get.Pvalue.p html GetNearGenes html Stat.diff.meth html Stat.nonpara html Stat.nonpara.permu html TCGA.pipe html TF.rank.plot html TFsurvival.plot html addDistNearestTSS html addMutCol html calcDistNearestTSS html calculateEnrichement html createBigWigDNAmetArray html createIGVtrack html createMAE html createMotifRelevantTfs html createSummaryDocument html createTSVTemplates html findMotifRegion html get.TFs html get.diff.meth html get.enriched.motif html get.feature.probe html get.pair html get.permu html get.tab html get.tabs html get450K html getClinic html getExp html getExpSamples html getGeneID html getMet html getMetSamples html getRNAseq html getRandomPairs html getRegionNearGenes html getSymbol html getTCGA html getTF html getTFBindingSites html getTFtargets html getTSS html heatmapGene html heatmapPairs html lm_eqn html metBoxPlot html motif.enrichment.plot html preAssociationProbeFiltering html promoterMeth html render_report html scatter html scatter.plot html schematic.plot html summarizeTF html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'ELMER' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'ELMER' as ELMER_2.16.0.zip * DONE (ELMER) * installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library' package 'ELMER' successfully unpacked and MD5 sums checked