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This page was generated on 2021-10-15 15:06:03 -0400 (Fri, 15 Oct 2021).

INSTALL results for EBcoexpress on tokay2

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raw results

Package 548/2041HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
EBcoexpress 1.36.0  (landing page)
John A. Dawson
Snapshot Date: 2021-10-14 04:50:12 -0400 (Thu, 14 Oct 2021)
git_url: https://git.bioconductor.org/packages/EBcoexpress
git_branch: RELEASE_3_13
git_last_commit: 3d7103b
git_last_commit_date: 2021-05-19 11:52:14 -0400 (Wed, 19 May 2021)
nebbiolo1Linux (Ubuntu 20.04.2 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: EBcoexpress
Version: 1.36.0
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/EBcoexpress_1.36.0.tar.gz && rm -rf EBcoexpress.buildbin-libdir && mkdir EBcoexpress.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=EBcoexpress.buildbin-libdir EBcoexpress_1.36.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL EBcoexpress_1.36.0.zip && rm EBcoexpress_1.36.0.tar.gz EBcoexpress_1.36.0.zip
StartedAt: 2021-10-14 08:34:42 -0400 (Thu, 14 Oct 2021)
EndedAt: 2021-10-14 08:35:08 -0400 (Thu, 14 Oct 2021)
EllapsedTime: 25.7 seconds
RetCode: 0
Status:   OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/EBcoexpress_1.36.0.tar.gz && rm -rf EBcoexpress.buildbin-libdir && mkdir EBcoexpress.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=EBcoexpress.buildbin-libdir EBcoexpress_1.36.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL EBcoexpress_1.36.0.zip && rm EBcoexpress_1.36.0.tar.gz EBcoexpress_1.36.0.zip
###
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  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
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  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100 82726  100 82726    0     0   513k      0 --:--:-- --:--:-- --:--:--  517k

install for i386

* installing *source* package 'EBcoexpress' ...
** using staged installation
** libs
"C:/rtools40/mingw32/bin/"gcc  -I"C:/Users/BIOCBU~1/BBS-3~1.13-/R/include" -DNDEBUG     -I"c:/extsoft/include"     -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign  -c EBcoexpress.c -o EBcoexpress.o
EBcoexpress.c: In function 'bwmcCworker':
EBcoexpress.c:74:15: warning: suggest parentheses around comparison in operand of '|' [-Wparentheses]
       if(temp < -1 | temp > 1)
          ~~~~~^~~~
C:/rtools40/mingw32/bin/gcc -shared -s -static-libgcc -o EBcoexpress.dll tmp.def EBcoexpress.o -Lc:/extsoft/lib/i386 -Lc:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.13-/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.13-bioc/meat/EBcoexpress.buildbin-libdir/00LOCK-EBcoexpress/00new/EBcoexpress/libs/i386
** R
** data
** demo
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'EBcoexpress'
    finding HTML links ... done
    ebCoexpressMeta                         html  
    ebCoexpressSeries                       html  
    fiftyGenes                              html  
    initializeHP                            html  
    makeMyD                                 html  
    priorDiagnostic                         html  
    rankMyGenes                             html  
    showNetwork                             html  
    showPair                                html  
    utilities                               html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'EBcoexpress' ...
** libs
"C:/rtools40/mingw64/bin/"gcc  -I"C:/Users/BIOCBU~1/BBS-3~1.13-/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign  -c EBcoexpress.c -o EBcoexpress.o
EBcoexpress.c: In function 'bwmcCworker':
EBcoexpress.c:74:15: warning: suggest parentheses around comparison in operand of '|' [-Wparentheses]
       if(temp < -1 | temp > 1)
          ~~~~~^~~~
C:/rtools40/mingw64/bin/gcc -shared -s -static-libgcc -o EBcoexpress.dll tmp.def EBcoexpress.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.13-/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.13-bioc/meat/EBcoexpress.buildbin-libdir/EBcoexpress/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'EBcoexpress' as EBcoexpress_1.36.0.zip
* DONE (EBcoexpress)
* installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library'
package 'EBcoexpress' successfully unpacked and MD5 sums checked