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This page was generated on 2021-10-15 15:06:03 -0400 (Fri, 15 Oct 2021).
To the developers/maintainers of the EBcoexpress package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/EBcoexpress.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
Package 548/2041 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
EBcoexpress 1.36.0 (landing page) John A. Dawson
| nebbiolo1 | Linux (Ubuntu 20.04.2 LTS) / x86_64 | OK | OK | WARNINGS | |||||||||
tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | WARNINGS | OK | |||||||||
machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | |||||||||
Package: EBcoexpress |
Version: 1.36.0 |
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/EBcoexpress_1.36.0.tar.gz && rm -rf EBcoexpress.buildbin-libdir && mkdir EBcoexpress.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=EBcoexpress.buildbin-libdir EBcoexpress_1.36.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL EBcoexpress_1.36.0.zip && rm EBcoexpress_1.36.0.tar.gz EBcoexpress_1.36.0.zip |
StartedAt: 2021-10-14 08:34:42 -0400 (Thu, 14 Oct 2021) |
EndedAt: 2021-10-14 08:35:08 -0400 (Thu, 14 Oct 2021) |
EllapsedTime: 25.7 seconds |
RetCode: 0 |
Status: OK |
############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/EBcoexpress_1.36.0.tar.gz && rm -rf EBcoexpress.buildbin-libdir && mkdir EBcoexpress.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=EBcoexpress.buildbin-libdir EBcoexpress_1.36.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL EBcoexpress_1.36.0.zip && rm EBcoexpress_1.36.0.tar.gz EBcoexpress_1.36.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 100 82726 100 82726 0 0 513k 0 --:--:-- --:--:-- --:--:-- 517k install for i386 * installing *source* package 'EBcoexpress' ... ** using staged installation ** libs "C:/rtools40/mingw32/bin/"gcc -I"C:/Users/BIOCBU~1/BBS-3~1.13-/R/include" -DNDEBUG -I"c:/extsoft/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c EBcoexpress.c -o EBcoexpress.o EBcoexpress.c: In function 'bwmcCworker': EBcoexpress.c:74:15: warning: suggest parentheses around comparison in operand of '|' [-Wparentheses] if(temp < -1 | temp > 1) ~~~~~^~~~ C:/rtools40/mingw32/bin/gcc -shared -s -static-libgcc -o EBcoexpress.dll tmp.def EBcoexpress.o -Lc:/extsoft/lib/i386 -Lc:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.13-/R/bin/i386 -lR installing to C:/Users/biocbuild/bbs-3.13-bioc/meat/EBcoexpress.buildbin-libdir/00LOCK-EBcoexpress/00new/EBcoexpress/libs/i386 ** R ** data ** demo ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'EBcoexpress' finding HTML links ... done ebCoexpressMeta html ebCoexpressSeries html fiftyGenes html initializeHP html makeMyD html priorDiagnostic html rankMyGenes html showNetwork html showPair html utilities html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'EBcoexpress' ... ** libs "C:/rtools40/mingw64/bin/"gcc -I"C:/Users/BIOCBU~1/BBS-3~1.13-/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c EBcoexpress.c -o EBcoexpress.o EBcoexpress.c: In function 'bwmcCworker': EBcoexpress.c:74:15: warning: suggest parentheses around comparison in operand of '|' [-Wparentheses] if(temp < -1 | temp > 1) ~~~~~^~~~ C:/rtools40/mingw64/bin/gcc -shared -s -static-libgcc -o EBcoexpress.dll tmp.def EBcoexpress.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.13-/R/bin/x64 -lR installing to C:/Users/biocbuild/bbs-3.13-bioc/meat/EBcoexpress.buildbin-libdir/EBcoexpress/libs/x64 ** testing if installed package can be loaded * MD5 sums packaged installation of 'EBcoexpress' as EBcoexpress_1.36.0.zip * DONE (EBcoexpress) * installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library' package 'EBcoexpress' successfully unpacked and MD5 sums checked