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This page was generated on 2021-10-15 15:06:02 -0400 (Fri, 15 Oct 2021).
To the developers/maintainers of the DelayedArray package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/DelayedArray.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
Package 469/2041 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
DelayedArray 0.18.0 (landing page) Hervé Pagès
| nebbiolo1 | Linux (Ubuntu 20.04.2 LTS) / x86_64 | OK | OK | WARNINGS | |||||||||
tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | WARNINGS | OK | |||||||||
machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | WARNINGS | OK | |||||||||
Package: DelayedArray |
Version: 0.18.0 |
Command: rm -rf DelayedArray.buildbin-libdir && mkdir DelayedArray.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=DelayedArray.buildbin-libdir DelayedArray_0.18.0.tar.gz |
StartedAt: 2021-10-15 08:55:01 -0400 (Fri, 15 Oct 2021) |
EndedAt: 2021-10-15 08:56:30 -0400 (Fri, 15 Oct 2021) |
EllapsedTime: 88.5 seconds |
RetCode: 0 |
Status: OK |
PackageFile: DelayedArray_0.18.0.zip |
PackageFileSize: 2.638 MiB |
############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf DelayedArray.buildbin-libdir && mkdir DelayedArray.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=DelayedArray.buildbin-libdir DelayedArray_0.18.0.tar.gz ### ############################################################################## ############################################################################## install for i386 * installing *source* package 'DelayedArray' ... ** using staged installation ** libs "C:/rtools40/mingw32/bin/"gcc -I"C:/Users/BIOCBU~1/BBS-3~1.13-/R/include" -DNDEBUG -I'C:/Users/biocbuild/bbs-3.13-bioc/R/library/S4Vectors/include' -I"c:/extsoft/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c R_init_DelayedArray.c -o R_init_DelayedArray.o "C:/rtools40/mingw32/bin/"gcc -I"C:/Users/BIOCBU~1/BBS-3~1.13-/R/include" -DNDEBUG -I'C:/Users/biocbuild/bbs-3.13-bioc/R/library/S4Vectors/include' -I"c:/extsoft/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c S4Vectors_stubs.c -o S4Vectors_stubs.o "C:/rtools40/mingw32/bin/"gcc -I"C:/Users/BIOCBU~1/BBS-3~1.13-/R/include" -DNDEBUG -I'C:/Users/biocbuild/bbs-3.13-bioc/R/library/S4Vectors/include' -I"c:/extsoft/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c abind.c -o abind.o "C:/rtools40/mingw32/bin/"gcc -I"C:/Users/BIOCBU~1/BBS-3~1.13-/R/include" -DNDEBUG -I'C:/Users/biocbuild/bbs-3.13-bioc/R/library/S4Vectors/include' -I"c:/extsoft/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c array_selection.c -o array_selection.o "C:/rtools40/mingw32/bin/"gcc -I"C:/Users/BIOCBU~1/BBS-3~1.13-/R/include" -DNDEBUG -I'C:/Users/biocbuild/bbs-3.13-bioc/R/library/S4Vectors/include' -I"c:/extsoft/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c compress_atomic_vector.c -o compress_atomic_vector.o compress_atomic_vector.c: In function 'C_encode_atomic_vector': compress_atomic_vector.c:66:9: warning: 'ans' is used uninitialized in this function [-Wuninitialized] return ans; ^~~ compress_atomic_vector.c: In function 'C_decode_atomic_vector': compress_atomic_vector.c:73:9: warning: 'ans' is used uninitialized in this function [-Wuninitialized] return ans; ^~~ compress_atomic_vector.c: In function 'C_compress_atomic_vector': compress_atomic_vector.c:85:9: warning: 'ans' is used uninitialized in this function [-Wuninitialized] return ans; ^~~ compress_atomic_vector.c: In function 'C_decompress_atomic_vector': compress_atomic_vector.c:92:9: warning: 'ans' is used uninitialized in this function [-Wuninitialized] return ans; ^~~ "C:/rtools40/mingw32/bin/"gcc -I"C:/Users/BIOCBU~1/BBS-3~1.13-/R/include" -DNDEBUG -I'C:/Users/biocbuild/bbs-3.13-bioc/R/library/S4Vectors/include' -I"c:/extsoft/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c sparseMatrix_utils.c -o sparseMatrix_utils.o C:/rtools40/mingw32/bin/gcc -shared -s -static-libgcc -o DelayedArray.dll tmp.def R_init_DelayedArray.o S4Vectors_stubs.o abind.o array_selection.o compress_atomic_vector.o sparseMatrix_utils.o -Lc:/extsoft/lib/i386 -Lc:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.13-/R/bin/i386 -lR installing to C:/Users/biocbuild/bbs-3.13-bioc/meat/DelayedArray.buildbin-libdir/00LOCK-DelayedArray/00new/DelayedArray/libs/i386 ** R ** inst ** byte-compile and prepare package for lazy loading Creating a new generic function for 'rowsum' in package 'DelayedArray' Creating a new generic function for 'aperm' in package 'DelayedArray' Creating a new generic function for 'apply' in package 'DelayedArray' Creating a new generic function for 'sweep' in package 'DelayedArray' Creating a new generic function for 'scale' in package 'DelayedArray' Creating a generic function for 'dnorm' from package 'stats' in package 'DelayedArray' Creating a generic function for 'pnorm' from package 'stats' in package 'DelayedArray' Creating a generic function for 'qnorm' from package 'stats' in package 'DelayedArray' Creating a generic function for 'dbinom' from package 'stats' in package 'DelayedArray' Creating a generic function for 'pbinom' from package 'stats' in package 'DelayedArray' Creating a generic function for 'qbinom' from package 'stats' in package 'DelayedArray' Creating a generic function for 'dpois' from package 'stats' in package 'DelayedArray' Creating a generic function for 'ppois' from package 'stats' in package 'DelayedArray' Creating a generic function for 'qpois' from package 'stats' in package 'DelayedArray' Creating a generic function for 'dlogis' from package 'stats' in package 'DelayedArray' Creating a generic function for 'plogis' from package 'stats' in package 'DelayedArray' Creating a generic function for 'qlogis' from package 'stats' in package 'DelayedArray' ** help *** installing help indices converting help for package 'DelayedArray' finding HTML links ... done Array-class html ArrayGrid-class html AutoBlock-global-settings html AutoGrid html ConstantArray-class html DelayedAbind-class html DelayedAperm-class html DelayedArray-class html DelayedArray-stats html DelayedArray-utils html DelayedMatrix-stats html DelayedMatrix-utils html DelayedNaryIsoOp-class html DelayedOp-class html DelayedSetDimnames-class html DelayedSubassign-class html DelayedSubset-class html DelayedUnaryIsoOpStack-class html DelayedUnaryIsoOpWithArgs-class html RleArray-class html RleArraySeed-class html SparseArraySeed-class html SparseArraySeed-utils html array_selection html bind-arrays html blockApply html chunkGrid html extract_array html makeCappedVolumeBox html mapToGrid html read_block html realize html showtree html simplify html sparseMatrix-utils html write_block html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'DelayedArray' ... ** libs "C:/rtools40/mingw64/bin/"gcc -I"C:/Users/BIOCBU~1/BBS-3~1.13-/R/include" -DNDEBUG -I'C:/Users/biocbuild/bbs-3.13-bioc/R/library/S4Vectors/include' -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c R_init_DelayedArray.c -o R_init_DelayedArray.o "C:/rtools40/mingw64/bin/"gcc -I"C:/Users/BIOCBU~1/BBS-3~1.13-/R/include" -DNDEBUG -I'C:/Users/biocbuild/bbs-3.13-bioc/R/library/S4Vectors/include' -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c S4Vectors_stubs.c -o S4Vectors_stubs.o "C:/rtools40/mingw64/bin/"gcc -I"C:/Users/BIOCBU~1/BBS-3~1.13-/R/include" -DNDEBUG -I'C:/Users/biocbuild/bbs-3.13-bioc/R/library/S4Vectors/include' -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c abind.c -o abind.o "C:/rtools40/mingw64/bin/"gcc -I"C:/Users/BIOCBU~1/BBS-3~1.13-/R/include" -DNDEBUG -I'C:/Users/biocbuild/bbs-3.13-bioc/R/library/S4Vectors/include' -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c array_selection.c -o array_selection.o "C:/rtools40/mingw64/bin/"gcc -I"C:/Users/BIOCBU~1/BBS-3~1.13-/R/include" -DNDEBUG -I'C:/Users/biocbuild/bbs-3.13-bioc/R/library/S4Vectors/include' -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c compress_atomic_vector.c -o compress_atomic_vector.o compress_atomic_vector.c: In function 'C_encode_atomic_vector': compress_atomic_vector.c:66:9: warning: 'ans' is used uninitialized in this function [-Wuninitialized] return ans; ^~~ compress_atomic_vector.c: In function 'C_decode_atomic_vector': compress_atomic_vector.c:73:9: warning: 'ans' is used uninitialized in this function [-Wuninitialized] return ans; ^~~ compress_atomic_vector.c: In function 'C_compress_atomic_vector': compress_atomic_vector.c:85:9: warning: 'ans' is used uninitialized in this function [-Wuninitialized] return ans; ^~~ compress_atomic_vector.c: In function 'C_decompress_atomic_vector': compress_atomic_vector.c:92:9: warning: 'ans' is used uninitialized in this function [-Wuninitialized] return ans; ^~~ "C:/rtools40/mingw64/bin/"gcc -I"C:/Users/BIOCBU~1/BBS-3~1.13-/R/include" -DNDEBUG -I'C:/Users/biocbuild/bbs-3.13-bioc/R/library/S4Vectors/include' -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c sparseMatrix_utils.c -o sparseMatrix_utils.o C:/rtools40/mingw64/bin/gcc -shared -s -static-libgcc -o DelayedArray.dll tmp.def R_init_DelayedArray.o S4Vectors_stubs.o abind.o array_selection.o compress_atomic_vector.o sparseMatrix_utils.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.13-/R/bin/x64 -lR installing to C:/Users/biocbuild/bbs-3.13-bioc/meat/DelayedArray.buildbin-libdir/DelayedArray/libs/x64 ** testing if installed package can be loaded * MD5 sums packaged installation of 'DelayedArray' as DelayedArray_0.18.0.zip * DONE (DelayedArray)