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This page was generated on 2021-10-15 15:06:03 -0400 (Fri, 15 Oct 2021).

INSTALL results for DMCHMM on tokay2

To the developers/maintainers of the DMCHMM package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/DMCHMM.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
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raw results

Package 515/2041HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
DMCHMM 1.14.0  (landing page)
Farhad Shokoohi
Snapshot Date: 2021-10-14 04:50:12 -0400 (Thu, 14 Oct 2021)
git_url: https://git.bioconductor.org/packages/DMCHMM
git_branch: RELEASE_3_13
git_last_commit: d913bcf
git_last_commit_date: 2021-05-19 12:29:50 -0400 (Wed, 19 May 2021)
nebbiolo1Linux (Ubuntu 20.04.2 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: DMCHMM
Version: 1.14.0
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/DMCHMM_1.14.0.tar.gz && rm -rf DMCHMM.buildbin-libdir && mkdir DMCHMM.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=DMCHMM.buildbin-libdir DMCHMM_1.14.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL DMCHMM_1.14.0.zip && rm DMCHMM_1.14.0.tar.gz DMCHMM_1.14.0.zip
StartedAt: 2021-10-14 10:13:49 -0400 (Thu, 14 Oct 2021)
EndedAt: 2021-10-14 10:14:50 -0400 (Thu, 14 Oct 2021)
EllapsedTime: 61.3 seconds
RetCode: 0
Status:   OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/DMCHMM_1.14.0.tar.gz && rm -rf DMCHMM.buildbin-libdir && mkdir DMCHMM.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=DMCHMM.buildbin-libdir DMCHMM_1.14.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL DMCHMM_1.14.0.zip && rm DMCHMM_1.14.0.tar.gz DMCHMM_1.14.0.zip
###
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  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100  755k  100  755k    0     0  1554k      0 --:--:-- --:--:-- --:--:-- 1558k

install for i386

* installing *source* package 'DMCHMM' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
Warning: replacing previous import 'IRanges::windows' by 'grDevices::windows' when loading 'DMCHMM'
** help
*** installing help indices
  converting help for package 'DMCHMM'
    finding HTML links ... done
    BSDMCs-class                            html  
    BSData-class                            html  
    finding level-2 HTML links ... done

    DMCHMM-package                          html  
    cBSDMCs-method                          html  
    cBSData-method                          html  
    combine-method                          html  
    data                                    html  
    findDMCs-method                         html  
    manhattanDMCs-method                    html  
    methHMEM-method                         html  
    methHMMCMC-method                       html  
    methLevels-method                       html  
    methReads-method                        html  
    methStates-method                       html  
    methVars-method                         html  
    params                                  html  
    qqDMCs-method                           html  
    readBismark-method                      html  
    totalReads-method                       html  
    writeBED-method                         html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Warning: replacing previous import 'IRanges::windows' by 'grDevices::windows' when loading 'DMCHMM'
** testing if installed package can be loaded from final location
Warning: replacing previous import 'IRanges::windows' by 'grDevices::windows' when loading 'DMCHMM'
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'DMCHMM' ...
** testing if installed package can be loaded
Warning: replacing previous import 'IRanges::windows' by 'grDevices::windows' when loading 'DMCHMM'
* MD5 sums
packaged installation of 'DMCHMM' as DMCHMM_1.14.0.zip
* DONE (DMCHMM)
* installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library'
package 'DMCHMM' successfully unpacked and MD5 sums checked