Back to Multiple platform build/check report for BioC 3.13 |
|
This page was generated on 2021-10-15 15:06:02 -0400 (Fri, 15 Oct 2021).
To the developers/maintainers of the DEGseq package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/DEGseq.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
Package 468/2041 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
DEGseq 1.46.0 (landing page) Likun Wang
| nebbiolo1 | Linux (Ubuntu 20.04.2 LTS) / x86_64 | OK | OK | OK | |||||||||
tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | |||||||||
machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | |||||||||
Package: DEGseq |
Version: 1.46.0 |
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/DEGseq_1.46.0.tar.gz && rm -rf DEGseq.buildbin-libdir && mkdir DEGseq.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=DEGseq.buildbin-libdir DEGseq_1.46.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL DEGseq_1.46.0.zip && rm DEGseq_1.46.0.tar.gz DEGseq_1.46.0.zip |
StartedAt: 2021-10-14 08:21:30 -0400 (Thu, 14 Oct 2021) |
EndedAt: 2021-10-14 08:22:22 -0400 (Thu, 14 Oct 2021) |
EllapsedTime: 52.1 seconds |
RetCode: 0 |
Status: OK |
############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/DEGseq_1.46.0.tar.gz && rm -rf DEGseq.buildbin-libdir && mkdir DEGseq.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=DEGseq.buildbin-libdir DEGseq_1.46.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL DEGseq_1.46.0.zip && rm DEGseq_1.46.0.tar.gz DEGseq_1.46.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 8 1604k 8 133k 0 0 186k 0 0:00:08 --:--:-- 0:00:08 186k 100 1604k 100 1604k 0 0 989k 0 0:00:01 0:00:01 --:--:-- 989k install for i386 * installing *source* package 'DEGseq' ... ** using staged installation ** libs "C:/rtools40/mingw32/bin/"g++ -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.13-/R/include" -DNDEBUG -I"c:/extsoft/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c getGeneExp.cpp -o getGeneExp.o C:/rtools40/mingw32/bin/g++ -std=gnu++11 -shared -s -static-libgcc -o DEGseq.dll tmp.def getGeneExp.o -Lc:/extsoft/lib/i386 -Lc:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.13-/R/bin/i386 -lR installing to C:/Users/biocbuild/bbs-3.13-bioc/meat/DEGseq.buildbin-libdir/00LOCK-DEGseq/00new/DEGseq/libs/i386 ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'DEGseq' finding HTML links ... done DEGexp html DEGexp2 html DEGseq html GeneExpExample1000 html GeneExpExample5000 html getGeneExp html kidneyChr21.bed html kidneyChr21Bowtie html liverChr21.bed html liverChr21Bowtie html readGeneExp html refFlatChr21 html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'DEGseq' ... ** libs "C:/rtools40/mingw64/bin/"g++ -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.13-/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c getGeneExp.cpp -o getGeneExp.o C:/rtools40/mingw64/bin/g++ -std=gnu++11 -shared -s -static-libgcc -o DEGseq.dll tmp.def getGeneExp.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.13-/R/bin/x64 -lR installing to C:/Users/biocbuild/bbs-3.13-bioc/meat/DEGseq.buildbin-libdir/DEGseq/libs/x64 ** testing if installed package can be loaded * MD5 sums packaged installation of 'DEGseq' as DEGseq_1.46.0.zip * DONE (DEGseq) * installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library' package 'DEGseq' successfully unpacked and MD5 sums checked