| Back to Multiple platform build/check report for BioC 3.13 |
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This page was generated on 2021-10-15 15:06:01 -0400 (Fri, 15 Oct 2021).
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To the developers/maintainers of the CoRegFlux package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/CoRegFlux.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 391/2041 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
Pauline Trébulle and Mohamed Elati
| nebbiolo1 | Linux (Ubuntu 20.04.2 LTS) / x86_64 | OK | OK | ERROR | |||||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | ERROR | OK | |||||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | ERROR | OK | |||||||||
| Package: CoRegFlux |
| Version: 1.8.0 |
| Command: C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/CoRegFlux_1.8.0.tar.gz && rm -rf CoRegFlux.buildbin-libdir && mkdir CoRegFlux.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=CoRegFlux.buildbin-libdir CoRegFlux_1.8.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL CoRegFlux_1.8.0.zip && rm CoRegFlux_1.8.0.tar.gz CoRegFlux_1.8.0.zip |
| StartedAt: 2021-10-14 08:17:55 -0400 (Thu, 14 Oct 2021) |
| EndedAt: 2021-10-14 08:18:56 -0400 (Thu, 14 Oct 2021) |
| EllapsedTime: 60.2 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/CoRegFlux_1.8.0.tar.gz && rm -rf CoRegFlux.buildbin-libdir && mkdir CoRegFlux.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=CoRegFlux.buildbin-libdir CoRegFlux_1.8.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL CoRegFlux_1.8.0.zip && rm CoRegFlux_1.8.0.tar.gz CoRegFlux_1.8.0.zip
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0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
16 4573k 16 748k 0 0 1975k 0 0:00:02 --:--:-- 0:00:02 1975k
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100 4573k 100 4573k 0 0 3217k 0 0:00:01 0:00:01 --:--:-- 3218k
install for i386
* installing *source* package 'CoRegFlux' ...
** using staged installation
** R
** data
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'CoRegFlux'
finding HTML links ... done
FBA_step html
ODCurveToFluxCurves html
ODCurveToMetabolicGeneCurves html
ODToFluxBounds html
ODcurveToMetCurve html
ODtoflux html
PredictedGeneState html
SC_EXP_DATA html
SC_GRN_1 html
SC_Test_data html
SC_experiment_influence html
Simulation html
Simulation_Step html
adjust_constraints_to_observed_rates html
aliases_SC html
build_exchange_met html
continuous_gpr html
convert_metabolites_to_model_names html
coregflux_static html
euler_step_biomass html
euler_step_metabolites html
get_biomass_flux_position html
get_fba_fluxes_from_observations html
get_fva_intervals_from_observations html
get_linear_model html
get_metabolites_exchange_fluxes html
gpr_expression html
iMM904 html
perturbation_function html
predict_linear_model_influence html
train_continuous_model html
update_fluxes_constraints_GRegulation html
update_fluxes_constraints_geneKOOV html
update_fluxes_constraints_influence html
update_fluxes_state html
update_system_state html
update_uptake_fluxes_constraints_metabolites
html
visFluxCurves html
visMetabolicGeneCurves html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Warning: Package 'CoRegFlux' is deprecated and will be removed from Bioconductor
version 3.14
** testing if installed package can be loaded from final location
Warning: Package 'CoRegFlux' is deprecated and will be removed from Bioconductor
version 3.14
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'CoRegFlux' ...
** testing if installed package can be loaded
Warning: Package 'CoRegFlux' is deprecated and will be removed from Bioconductor
version 3.14
* MD5 sums
packaged installation of 'CoRegFlux' as CoRegFlux_1.8.0.zip
* DONE (CoRegFlux)
* installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library'
package 'CoRegFlux' successfully unpacked and MD5 sums checked