Back to Multiple platform build/check report for BioC 3.13 |
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This page was generated on 2021-10-15 15:05:59 -0400 (Fri, 15 Oct 2021).
To the developers/maintainers of the CATALYST package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/CATALYST.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
Package 244/2041 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
CATALYST 1.16.2 (landing page) Helena L. Crowell
| nebbiolo1 | Linux (Ubuntu 20.04.2 LTS) / x86_64 | OK | OK | OK | |||||||||
tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | |||||||||
machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | |||||||||
Package: CATALYST |
Version: 1.16.2 |
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/CATALYST_1.16.2.tar.gz && rm -rf CATALYST.buildbin-libdir && mkdir CATALYST.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=CATALYST.buildbin-libdir CATALYST_1.16.2.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL CATALYST_1.16.2.zip && rm CATALYST_1.16.2.tar.gz CATALYST_1.16.2.zip |
StartedAt: 2021-10-14 11:25:39 -0400 (Thu, 14 Oct 2021) |
EndedAt: 2021-10-14 11:26:41 -0400 (Thu, 14 Oct 2021) |
EllapsedTime: 61.7 seconds |
RetCode: 0 |
Status: OK |
############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/CATALYST_1.16.2.tar.gz && rm -rf CATALYST.buildbin-libdir && mkdir CATALYST.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=CATALYST.buildbin-libdir CATALYST_1.16.2.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL CATALYST_1.16.2.zip && rm CATALYST_1.16.2.tar.gz CATALYST_1.16.2.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 68 3593k 68 2453k 0 0 2731k 0 0:00:01 --:--:-- 0:00:01 2731k 100 3593k 100 3593k 0 0 3038k 0 0:00:01 0:00:01 --:--:-- 3042k install for i386 * installing *source* package 'CATALYST' ... ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'CATALYST' finding HTML links ... done SCE-accessors html finding level-2 HTML links ... done adaptSpillmat html applyCutoffs html assignPrelim html clrDR html cluster html compCytof html computeSpillmat html data html estCutoffs html extractClusters html filterSCE html guessPanel html mergeClusters html normCytof html pbMDS html plotAbundances html plotClusterExprs html plotClusterHeatmap html plotCodes html plotCounts html plotDR html plotDiffHeatmap html plotEvents html plotExprHeatmap html plotExprs html plotFreqHeatmap html plotMahal html plotMultiHeatmap html plotNRS html plotPbExprs html plotScatter html plotSpillmat html plotYields html prepData html runDR html sce2fcs html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'CATALYST' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'CATALYST' as CATALYST_1.16.2.zip * DONE (CATALYST) * installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library' package 'CATALYST' successfully unpacked and MD5 sums checked