Xiangyu Luo
| Snapshot Date: 2021-10-14 04:50:12 -0400 (Thu, 14 Oct 2021) |
| git_url: https://git.bioconductor.org/packages/BUScorrect |
| git_branch: RELEASE_3_13 |
| git_last_commit: 023b2d8 |
| git_last_commit_date: 2021-05-19 12:37:23 -0400 (Wed, 19 May 2021) |
| Back to Multiple platform build/check report for BioC 3.13 |
|
This page was generated on 2021-10-15 15:05:59 -0400 (Fri, 15 Oct 2021).
|
To the developers/maintainers of the BUScorrect package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/BUScorrect.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 226/2041 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| BUScorrect 1.10.0 (landing page) Xiangyu Luo
| nebbiolo1 | Linux (Ubuntu 20.04.2 LTS) / x86_64 | OK | OK | OK | | ||||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | | ||||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: BUScorrect |
| Version: 1.10.0 |
| Command: C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/BUScorrect_1.10.0.tar.gz && rm -rf BUScorrect.buildbin-libdir && mkdir BUScorrect.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=BUScorrect.buildbin-libdir BUScorrect_1.10.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL BUScorrect_1.10.0.zip && rm BUScorrect_1.10.0.tar.gz BUScorrect_1.10.0.zip |
| StartedAt: 2021-10-14 08:45:31 -0400 (Thu, 14 Oct 2021) |
| EndedAt: 2021-10-14 08:46:19 -0400 (Thu, 14 Oct 2021) |
| EllapsedTime: 48.8 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/BUScorrect_1.10.0.tar.gz && rm -rf BUScorrect.buildbin-libdir && mkdir BUScorrect.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=BUScorrect.buildbin-libdir BUScorrect_1.10.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL BUScorrect_1.10.0.zip && rm BUScorrect_1.10.0.tar.gz BUScorrect_1.10.0.zip
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% Total % Received % Xferd Average Speed Time Time Time Current
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0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
41 3249k 41 1348k 0 0 1582k 0 0:00:02 --:--:-- 0:00:02 1582k
100 3249k 100 3249k 0 0 2134k 0 0:00:01 0:00:01 --:--:-- 2136k
install for i386
* installing *source* package 'BUScorrect' ...
** using staged installation
** libs
"C:/rtools40/mingw32/bin/"gcc -I"C:/Users/BIOCBU~1/BBS-3~1.13-/R/include" -DNDEBUG -I"c:/extsoft/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c BUS_Cfunctions.c -o BUS_Cfunctions.o
C:/rtools40/mingw32/bin/gcc -shared -s -static-libgcc -o BUScorrect.dll tmp.def BUS_Cfunctions.o -Lc:/extsoft/lib/i386 -Lc:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.13-/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.13-bioc/meat/BUScorrect.buildbin-libdir/00LOCK-BUScorrect/00new/BUScorrect/libs/i386
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'BUScorrect'
finding HTML links ... done
BIC_BUS html
BUScorrect-package html
BUSexample_data html
BUSgibbs html
IG_index html
Subtypes html
adjusted_values html
baseline_expression_values html
calculate_EPSR_gamma html
calculate_EPSR_mu html
calculate_EPSR_sigma_sq html
estimate_IG_indicators html
location_batch_effects html
postprob_DE html
postprob_DE_thr_fun html
print.BUSfits html
scale_batch_effects html
subtype_effects html
summary.BUSfits html
visualize_data html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'BUScorrect' ...
** libs
"C:/rtools40/mingw64/bin/"gcc -I"C:/Users/BIOCBU~1/BBS-3~1.13-/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c BUS_Cfunctions.c -o BUS_Cfunctions.o
C:/rtools40/mingw64/bin/gcc -shared -s -static-libgcc -o BUScorrect.dll tmp.def BUS_Cfunctions.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.13-/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.13-bioc/meat/BUScorrect.buildbin-libdir/BUScorrect/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'BUScorrect' as BUScorrect_1.10.0.zip
* DONE (BUScorrect)
* installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library'
package 'BUScorrect' successfully unpacked and MD5 sums checked