Etienne A. Thevenot
| Snapshot Date: 2020-04-14 16:46:13 -0400 (Tue, 14 Apr 2020) |
| URL: https://git.bioconductor.org/packages/ropls |
| Branch: RELEASE_3_10 |
| Last Commit: 6ba4e6d |
| Last Changed Date: 2020-01-15 08:54:50 -0400 (Wed, 15 Jan 2020) |
| Back to Multiple platform build/check report for BioC 3.10 |
|
This page was generated on 2020-04-15 12:25:12 -0400 (Wed, 15 Apr 2020).
| Package 1470/1823 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| ropls 1.18.8 Etienne A. Thevenot
| malbec1 | Linux (Ubuntu 18.04.4 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | OK | OK | [ OK ] | OK | | ||||||
| merida1 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | |
| Package: ropls |
| Version: 1.18.8 |
| Command: C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD check --force-multiarch --install=check:ropls.install-out.txt --library=C:\Users\biocbuild\bbs-3.10-bioc\R\library --no-vignettes --timings ropls_1.18.8.tar.gz |
| StartedAt: 2020-04-15 06:15:55 -0400 (Wed, 15 Apr 2020) |
| EndedAt: 2020-04-15 06:17:49 -0400 (Wed, 15 Apr 2020) |
| EllapsedTime: 113.5 seconds |
| RetCode: 0 |
| Status: OK |
| CheckDir: ropls.Rcheck |
| Warnings: 0 |
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### Running command:
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### C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD check --force-multiarch --install=check:ropls.install-out.txt --library=C:\Users\biocbuild\bbs-3.10-bioc\R\library --no-vignettes --timings ropls_1.18.8.tar.gz
###
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* using log directory 'C:/Users/biocbuild/bbs-3.10-bioc/meat/ropls.Rcheck'
* using R version 3.6.3 (2020-02-29)
* using platform: x86_64-w64-mingw32 (64-bit)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'ropls/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'ropls' version '1.18.8'
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'ropls' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking 'build' directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* loading checks for arch 'i386'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* loading checks for arch 'x64'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... NOTE
Namespace in Imports field not imported from: 'MultiDataSet'
All declared Imports should be used.
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking files in 'vignettes' ... OK
* checking examples ...
** running examples for arch 'i386' ... OK
Examples with CPU or elapsed time > 5s
user system elapsed
getMset 5.87 0.42 6.3
opls 5.05 0.05 5.1
** running examples for arch 'x64' ... OK
Examples with CPU or elapsed time > 5s
user system elapsed
getMset 5.82 0.19 6.02
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in 'inst/doc' ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE
Status: 1 NOTE
See
'C:/Users/biocbuild/bbs-3.10-bioc/meat/ropls.Rcheck/00check.log'
for details.
ropls.Rcheck/00install.out
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###
### Running command:
###
### C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.10/bioc/src/contrib/ropls_1.18.8.tar.gz && rm -rf ropls.buildbin-libdir && mkdir ropls.buildbin-libdir && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=ropls.buildbin-libdir ropls_1.18.8.tar.gz && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL ropls_1.18.8.zip && rm ropls_1.18.8.tar.gz ropls_1.18.8.zip
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% Total % Received % Xferd Average Speed Time Time Time Current
Dload Upload Total Spent Left Speed
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100 1313k 100 1313k 0 0 16.3M 0 --:--:-- --:--:-- --:--:-- 17.3M
install for i386
* installing *source* package 'ropls' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
in method for 'opls' with signature 'x="MultiDataSet"': no definition for class "MultiDataSet"
** help
*** installing help indices
converting help for package 'ropls'
finding HTML links ... done
aminoacids html
cellulose html
checkW4M html
coef html
cornell html
fitted html
foods html
fromW4M html
getEset html
getLoadingMN html
getMset html
getPcaVarVn html
getScoreMN html
getSubsetVi html
getSummaryDF html
getVipVn html
getWeightMN html
linnerud html
lowarp html
mark html
opls-class html
opls html
oplsMultiDataSet-class html
plot html
predict html
print html
residuals html
ropls-package html
sacurine html
show html
tested html
toW4M html
view html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'ropls' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'ropls' as ropls_1.18.8.zip
* DONE (ropls)
* installing to library 'C:/Users/biocbuild/bbs-3.10-bioc/R/library'
package 'ropls' successfully unpacked and MD5 sums checked
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ropls.Rcheck/examples_i386/ropls-Ex.timings
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ropls.Rcheck/examples_x64/ropls-Ex.timings
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