This page was generated on 2020-04-15 12:07:04 -0400 (Wed, 15 Apr 2020).
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### Running command:
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### /home/biocbuild/bbs-3.10-bioc/R/bin/R CMD INSTALL networkBMA
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* installing to library ‘/home/biocbuild/bbs-3.10-bioc/R/library’
* installing *source* package ‘networkBMA’ ...
** using staged installation
** libs
g++ -std=gnu++11 -I"/home/biocbuild/bbs-3.10-bioc/R/include" -DNDEBUG -I./include -I"/home/biocbuild/bbs-3.10-bioc/R/library/Rcpp/include" -I"/home/biocbuild/bbs-3.10-bioc/R/library/RcppArmadillo/include" -I"/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include" -I"/home/biocbuild/bbs-3.10-bioc/R/library/BH/include" -I/usr/local/include -fpic -g -O2 -Wall -c MurmurHash3.cpp -o MurmurHash3.o
g++ -std=gnu++11 -I"/home/biocbuild/bbs-3.10-bioc/R/include" -DNDEBUG -I./include -I"/home/biocbuild/bbs-3.10-bioc/R/library/Rcpp/include" -I"/home/biocbuild/bbs-3.10-bioc/R/library/RcppArmadillo/include" -I"/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include" -I"/home/biocbuild/bbs-3.10-bioc/R/library/BH/include" -I/usr/local/include -fpic -g -O2 -Wall -c RcppExports.cpp -o RcppExports.o
In file included from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/Core:392:0,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from RcppExports.cpp:5:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:60:39: warning: ignoring attributes on template argument ‘__m128 {aka __vector(4) float}’ [-Wignored-attributes]
template<> struct is_arithmetic<__m128> { enum { value = true }; };
^
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:61:40: warning: ignoring attributes on template argument ‘__m128i {aka __vector(2) long long int}’ [-Wignored-attributes]
template<> struct is_arithmetic<__m128i> { enum { value = true }; };
^
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:62:40: warning: ignoring attributes on template argument ‘__m128d {aka __vector(2) double}’ [-Wignored-attributes]
template<> struct is_arithmetic<__m128d> { enum { value = true }; };
^
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:161:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f {aka __vector(4) float}’ [-Wignored-attributes]
template<> struct unpacket_traits<Packet4f> { typedef float type; enum {size=4, alignment=Aligned16}; typedef Packet4f half; };
^
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:162:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d {aka __vector(2) double}’ [-Wignored-attributes]
template<> struct unpacket_traits<Packet2d> { typedef double type; enum {size=2, alignment=Aligned16}; typedef Packet2d half; };
^
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:163:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4i {aka __vector(2) long long int}’ [-Wignored-attributes]
template<> struct unpacket_traits<Packet4i> { typedef int type; enum {size=4, alignment=Aligned16}; typedef Packet4i half; };
^
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:718:35: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f {aka __vector(4) float}’ [-Wignored-attributes]
struct palign_impl<Offset,Packet4f>
^
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:741:35: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4i {aka __vector(2) long long int}’ [-Wignored-attributes]
struct palign_impl<Offset,Packet4i>
^
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:764:35: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d {aka __vector(2) double}’ [-Wignored-attributes]
struct palign_impl<Offset,Packet2d>
^
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:778:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f {aka __vector(4) float}’ [-Wignored-attributes]
ptranspose(PacketBlock<Packet4f,4>& kernel) {
^
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:783:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d {aka __vector(2) double}’ [-Wignored-attributes]
ptranspose(PacketBlock<Packet2d,2>& kernel) {
^
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:790:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4i {aka __vector(2) long long int}’ [-Wignored-attributes]
ptranspose(PacketBlock<Packet4i,4>& kernel) {
^
In file included from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/Core:374:0,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from RcppExports.cpp:5:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:15:70: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f {aka __vector(4) float}’ [-Wignored-attributes]
template<> struct conj_helper<PACKET_REAL, PACKET_CPLX, false,false> { \
^
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:232:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f)
^
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:22:70: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f {aka __vector(4) float}’ [-Wignored-attributes]
template<> struct conj_helper<PACKET_CPLX, PACKET_REAL, false,false> { \
^
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:232:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f)
^
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:15:70: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d {aka __vector(2) double}’ [-Wignored-attributes]
template<> struct conj_helper<PACKET_REAL, PACKET_CPLX, false,false> { \
^
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:417:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d)
^
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:22:70: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d {aka __vector(2) double}’ [-Wignored-attributes]
template<> struct conj_helper<PACKET_CPLX, PACKET_REAL, false,false> { \
^
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:417:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d)
^
In file included from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/Core:367:0,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from RcppExports.cpp:5:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<float, 4>’:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits<Eigen::Matrix<float, 4, 1> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:224:7: required from ‘struct Eigen::internal::traits<Eigen::Quaternion<float> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:24:46: required from here
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type {aka __vector(4) float}’ [-Wignored-attributes]
bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type {aka __vector(4) float}’ [-Wignored-attributes]
bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type {aka __vector(4) float}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(4) float>::half {aka __vector(4) float}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:188:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type {aka __vector(4) float}’ [-Wignored-attributes]
typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
^~~~
In file included from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/Core:434:0,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from RcppExports.cpp:5:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<float, 4, 1>, 0>’:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<float, 4, 1>, 1>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<float, 4, 1>, 3>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Matrix<float, 4, 1> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Matrix<float, 4, 1> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<float, 4, 1> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix<float, 4, 1>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from ‘class Eigen::QuaternionBase<Eigen::Quaternion<float> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:232:7: required from ‘class Eigen::Quaternion<float>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:27:3: required from here
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type {aka __vector(4) float}’ [-Wignored-attributes]
>::type PacketReturnType;
^~~~~~~~~~~~~~~~
In file included from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/Core:367:0,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from RcppExports.cpp:5:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<double, 4>’:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits<Eigen::Matrix<double, 4, 1> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:224:7: required from ‘struct Eigen::internal::traits<Eigen::Quaternion<double> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:88:47: required from here
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:188:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
^~~~
In file included from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/Core:434:0,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from RcppExports.cpp:5:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, 4, 1>, 0>’:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, 4, 1>, 1>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, 4, 1>, 3>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Matrix<double, 4, 1> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Matrix<double, 4, 1> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<double, 4, 1> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix<double, 4, 1>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from ‘class Eigen::QuaternionBase<Eigen::Quaternion<double> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:232:7: required from ‘class Eigen::Quaternion<double>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:92:3: required from here
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
>::type PacketReturnType;
^~~~~~~~~~~~~~~~
In file included from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/SparseCore:37:0,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/Sparse:26,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/RcppEigenForward.h:31,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from RcppExports.cpp:5:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase<Eigen::SparseMatrix<double, 0, int> >’:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from ‘class Eigen::SparseCompressedBase<Eigen::SparseMatrix<double, 0, int> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:96:7: required from ‘class Eigen::SparseMatrix<double, 0, int>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/ConstrainedConjGrad.h:61:25: required from here
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
>::type PacketReturnType;
^~~~~~~~~~~~~~~~
In file included from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/Core:367:0,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from RcppExports.cpp:5:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<int, -1>’:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits<Eigen::Matrix<int, -1, 1> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<int, -1, 1> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix<int, -1, 1>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h:168:29: required from here
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<int>::type {aka __vector(2) long long int}’ [-Wignored-attributes]
bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<int>::type {aka __vector(2) long long int}’ [-Wignored-attributes]
bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<int>::type {aka __vector(2) long long int}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) long long int>::half {aka __vector(2) long long int}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:188:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<int>::type {aka __vector(2) long long int}’ [-Wignored-attributes]
typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
^~~~
In file included from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/Core:434:0,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from RcppExports.cpp:5:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<int, -1, 1>, 0>’:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<int, -1, 1>, 1>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<int, -1, 1>, 3>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Matrix<int, -1, 1> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Matrix<int, -1, 1> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<int, -1, 1> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix<int, -1, 1>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h:168:29: required from here
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<int>::type {aka __vector(2) long long int}’ [-Wignored-attributes]
>::type PacketReturnType;
^~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<Eigen::Matrix<int, -1, 1> >, 0>’:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<Eigen::Matrix<int, -1, 1> >, 1>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<Eigen::Matrix<int, -1, 1> >, 3>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Transpose<Eigen::Matrix<int, -1, 1> > >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Transpose<Eigen::Matrix<int, -1, 1> > >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:115:37: required from ‘class Eigen::TransposeImpl<Eigen::Matrix<int, -1, 1>, Eigen::Dense>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from ‘class Eigen::Transpose<Eigen::Matrix<int, -1, 1> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h:178:72: required from here
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<int>::type {aka __vector(2) long long int}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<int, -1, -1>, 0>’:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<int, -1, -1>, 1>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<int, -1, -1>, 3>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Matrix<int, -1, -1> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Matrix<int, -1, -1> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<int, -1, -1> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix<int, -1, -1>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h:179:36: required from here
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<int>::type {aka __vector(2) long long int}’ [-Wignored-attributes]
g++ -std=gnu++11 -I"/home/biocbuild/bbs-3.10-bioc/R/include" -DNDEBUG -I./include -I"/home/biocbuild/bbs-3.10-bioc/R/library/Rcpp/include" -I"/home/biocbuild/bbs-3.10-bioc/R/library/RcppArmadillo/include" -I"/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include" -I"/home/biocbuild/bbs-3.10-bioc/R/library/BH/include" -I/usr/local/include -fpic -g -O2 -Wall -c ScanBMA_full.cpp -o ScanBMA_full.o
In file included from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/Core:392:0,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from ScanBMA_full.cpp:6:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:60:39: warning: ignoring attributes on template argument ‘__m128 {aka __vector(4) float}’ [-Wignored-attributes]
template<> struct is_arithmetic<__m128> { enum { value = true }; };
^
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:61:40: warning: ignoring attributes on template argument ‘__m128i {aka __vector(2) long long int}’ [-Wignored-attributes]
template<> struct is_arithmetic<__m128i> { enum { value = true }; };
^
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:62:40: warning: ignoring attributes on template argument ‘__m128d {aka __vector(2) double}’ [-Wignored-attributes]
template<> struct is_arithmetic<__m128d> { enum { value = true }; };
^
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:161:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f {aka __vector(4) float}’ [-Wignored-attributes]
template<> struct unpacket_traits<Packet4f> { typedef float type; enum {size=4, alignment=Aligned16}; typedef Packet4f half; };
^
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:162:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d {aka __vector(2) double}’ [-Wignored-attributes]
template<> struct unpacket_traits<Packet2d> { typedef double type; enum {size=2, alignment=Aligned16}; typedef Packet2d half; };
^
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:163:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4i {aka __vector(2) long long int}’ [-Wignored-attributes]
template<> struct unpacket_traits<Packet4i> { typedef int type; enum {size=4, alignment=Aligned16}; typedef Packet4i half; };
^
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:718:35: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f {aka __vector(4) float}’ [-Wignored-attributes]
struct palign_impl<Offset,Packet4f>
^
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:741:35: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4i {aka __vector(2) long long int}’ [-Wignored-attributes]
struct palign_impl<Offset,Packet4i>
^
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:764:35: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d {aka __vector(2) double}’ [-Wignored-attributes]
struct palign_impl<Offset,Packet2d>
^
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:778:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f {aka __vector(4) float}’ [-Wignored-attributes]
ptranspose(PacketBlock<Packet4f,4>& kernel) {
^
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:783:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d {aka __vector(2) double}’ [-Wignored-attributes]
ptranspose(PacketBlock<Packet2d,2>& kernel) {
^
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:790:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4i {aka __vector(2) long long int}’ [-Wignored-attributes]
ptranspose(PacketBlock<Packet4i,4>& kernel) {
^
In file included from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/Core:374:0,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from ScanBMA_full.cpp:6:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:15:70: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f {aka __vector(4) float}’ [-Wignored-attributes]
template<> struct conj_helper<PACKET_REAL, PACKET_CPLX, false,false> { \
^
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:232:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f)
^
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:22:70: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f {aka __vector(4) float}’ [-Wignored-attributes]
template<> struct conj_helper<PACKET_CPLX, PACKET_REAL, false,false> { \
^
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:232:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f)
^
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:15:70: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d {aka __vector(2) double}’ [-Wignored-attributes]
template<> struct conj_helper<PACKET_REAL, PACKET_CPLX, false,false> { \
^
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:417:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d)
^
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:22:70: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d {aka __vector(2) double}’ [-Wignored-attributes]
template<> struct conj_helper<PACKET_CPLX, PACKET_REAL, false,false> { \
^
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:417:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d)
^
In file included from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/Core:367:0,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from ScanBMA_full.cpp:6:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<float, 4>’:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits<Eigen::Matrix<float, 4, 1> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:224:7: required from ‘struct Eigen::internal::traits<Eigen::Quaternion<float> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:24:46: required from here
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type {aka __vector(4) float}’ [-Wignored-attributes]
bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type {aka __vector(4) float}’ [-Wignored-attributes]
bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type {aka __vector(4) float}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(4) float>::half {aka __vector(4) float}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:188:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type {aka __vector(4) float}’ [-Wignored-attributes]
typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
^~~~
In file included from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/Core:434:0,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from ScanBMA_full.cpp:6:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<float, 4, 1>, 0>’:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<float, 4, 1>, 1>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<float, 4, 1>, 3>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Matrix<float, 4, 1> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Matrix<float, 4, 1> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<float, 4, 1> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix<float, 4, 1>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from ‘class Eigen::QuaternionBase<Eigen::Quaternion<float> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:232:7: required from ‘class Eigen::Quaternion<float>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:27:3: required from here
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type {aka __vector(4) float}’ [-Wignored-attributes]
>::type PacketReturnType;
^~~~~~~~~~~~~~~~
In file included from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/Core:367:0,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from ScanBMA_full.cpp:6:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<double, 4>’:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits<Eigen::Matrix<double, 4, 1> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:224:7: required from ‘struct Eigen::internal::traits<Eigen::Quaternion<double> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:88:47: required from here
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:188:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
^~~~
In file included from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/Core:434:0,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from ScanBMA_full.cpp:6:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, 4, 1>, 0>’:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, 4, 1>, 1>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, 4, 1>, 3>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Matrix<double, 4, 1> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Matrix<double, 4, 1> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<double, 4, 1> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix<double, 4, 1>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from ‘class Eigen::QuaternionBase<Eigen::Quaternion<double> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:232:7: required from ‘class Eigen::Quaternion<double>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:92:3: required from here
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
>::type PacketReturnType;
^~~~~~~~~~~~~~~~
In file included from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/SparseCore:37:0,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/Sparse:26,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/RcppEigenForward.h:31,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from ScanBMA_full.cpp:6:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase<Eigen::SparseMatrix<double, 0, int> >’:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from ‘class Eigen::SparseCompressedBase<Eigen::SparseMatrix<double, 0, int> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:96:7: required from ‘class Eigen::SparseMatrix<double, 0, int>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/ConstrainedConjGrad.h:61:25: required from here
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
>::type PacketReturnType;
^~~~~~~~~~~~~~~~
In file included from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/Core:367:0,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from ScanBMA_full.cpp:6:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<int, -1>’:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits<Eigen::Matrix<int, -1, 1> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<int, -1, 1> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix<int, -1, 1>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h:168:29: required from here
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<int>::type {aka __vector(2) long long int}’ [-Wignored-attributes]
bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<int>::type {aka __vector(2) long long int}’ [-Wignored-attributes]
bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<int>::type {aka __vector(2) long long int}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) long long int>::half {aka __vector(2) long long int}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:188:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<int>::type {aka __vector(2) long long int}’ [-Wignored-attributes]
typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
^~~~
In file included from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/Core:434:0,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from ScanBMA_full.cpp:6:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<int, -1, 1>, 0>’:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<int, -1, 1>, 1>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<int, -1, 1>, 3>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Matrix<int, -1, 1> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Matrix<int, -1, 1> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<int, -1, 1> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix<int, -1, 1>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h:168:29: required from here
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<int>::type {aka __vector(2) long long int}’ [-Wignored-attributes]
>::type PacketReturnType;
^~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<Eigen::Matrix<int, -1, 1> >, 0>’:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<Eigen::Matrix<int, -1, 1> >, 1>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<Eigen::Matrix<int, -1, 1> >, 3>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Transpose<Eigen::Matrix<int, -1, 1> > >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Transpose<Eigen::Matrix<int, -1, 1> > >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:115:37: required from ‘class Eigen::TransposeImpl<Eigen::Matrix<int, -1, 1>, Eigen::Dense>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from ‘class Eigen::Transpose<Eigen::Matrix<int, -1, 1> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h:178:72: required from here
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<int>::type {aka __vector(2) long long int}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<int, -1, -1>, 0>’:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<int, -1, -1>, 1>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<int, -1, -1>, 3>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Matrix<int, -1, -1> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Matrix<int, -1, -1> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<int, -1, -1> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix<int, -1, -1>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h:179:36: required from here
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<int>::type {aka __vector(2) long long int}’ [-Wignored-attributes]
In file included from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/Core:367:0,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from ScanBMA_full.cpp:6:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<double, -1>’:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits<Eigen::Matrix<double, -1, -1> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Map.h:18:8: required from ‘struct Eigen::internal::traits<Eigen::Map<Eigen::Matrix<double, -1, -1> > >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/ForwardDeclarations.h:32:54: required from ‘struct Eigen::internal::accessors_level<Eigen::Map<Eigen::Matrix<double, -1, -1> > >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/ForwardDeclarations.h:113:75: required from ‘class Eigen::Map<Eigen::Matrix<double, -1, -1> >’
ScanBMA_full.cpp:52:25: required from here
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:188:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
^~~~
In file included from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/Core:434:0,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from ScanBMA_full.cpp:6:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, -1, -1>, 0>’:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, -1, -1>, 1>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, -1, -1>, 3>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Matrix<double, -1, -1> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Matrix<double, -1, -1> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<double, -1, -1> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix<double, -1, -1>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Map.h:24:30: required from ‘struct Eigen::internal::traits<Eigen::Map<Eigen::Matrix<double, -1, -1> > >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/ForwardDeclarations.h:32:54: required from ‘struct Eigen::internal::accessors_level<Eigen::Map<Eigen::Matrix<double, -1, -1> > >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/ForwardDeclarations.h:113:75: required from ‘class Eigen::Map<Eigen::Matrix<double, -1, -1> >’
ScanBMA_full.cpp:52:25: required from here
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
>::type PacketReturnType;
^~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Map<Eigen::Matrix<double, -1, -1> >, 0>’:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Map<Eigen::Matrix<double, -1, -1> >, 1>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Map<Eigen::Matrix<double, -1, -1> >, 3>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Map<Eigen::Matrix<double, -1, -1> > >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Map<Eigen::Matrix<double, -1, -1> > >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Map<Eigen::Matrix<double, -1, -1> >, 0>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:219:34: required from ‘class Eigen::MapBase<Eigen::Map<Eigen::Matrix<double, -1, -1> >, 1>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Map.h:94:79: required from ‘class Eigen::Map<Eigen::Matrix<double, -1, -1> >’
ScanBMA_full.cpp:52:25: required from here
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, -1, 1>, 0>’:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, -1, 1>, 1>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, -1, 1>, 3>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Matrix<double, -1, 1> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Matrix<double, -1, 1> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<double, -1, 1> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix<double, -1, 1>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Map.h:24:30: required from ‘struct Eigen::internal::traits<Eigen::Map<Eigen::Matrix<double, -1, 1> > >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/ForwardDeclarations.h:32:54: required from ‘struct Eigen::internal::accessors_level<Eigen::Map<Eigen::Matrix<double, -1, 1> > >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/ForwardDeclarations.h:113:75: required from ‘class Eigen::Map<Eigen::Matrix<double, -1, 1> >’
ScanBMA_full.cpp:53:26: required from here
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0>’:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Map<Eigen::Matrix<double, -1, 1> >, 1>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Map<Eigen::Matrix<double, -1, 1> >, 3>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Map<Eigen::Matrix<double, -1, 1> > >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Map<Eigen::Matrix<double, -1, 1> > >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:219:34: required from ‘class Eigen::MapBase<Eigen::Map<Eigen::Matrix<double, -1, 1> >, 1>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Map.h:94:79: required from ‘class Eigen::Map<Eigen::Matrix<double, -1, 1> >’
ScanBMA_full.cpp:53:26: required from here
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, 0>’:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, 2>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > > >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > > >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:115:37: required from ‘class Eigen::TransposeImpl<const Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Dense>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from ‘class Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >’
ScanBMA_full.cpp:56:97: required from here
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0>, 0>’:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from ‘class Eigen::internal::dense_product_base<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0, 7>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from ‘class Eigen::ProductImpl<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0, Eigen::Dense>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0>’
ScanBMA_full.cpp:57:50: required from here
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >, 0>’:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> > >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> > >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Solve.h:86:7: required from ‘class Eigen::SolveImpl<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0>, Eigen::Dense>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Solve.h:62:7: required from ‘class Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >’
ScanBMA_full.cpp:57:51: required from here
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, 1>, 0>, 0>’:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, 1>, 0> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, 1>, 0> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from ‘class Eigen::internal::dense_product_base<Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, 1>, 0, 7>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from ‘class Eigen::ProductImpl<Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, 1>, 0, Eigen::Dense>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, 1>, 0>’
ScanBMA_full.cpp:58:29: required from here
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Map<Eigen::Matrix<double, -1, 1> >, const Eigen::Matrix<double, -1, 1> >, 0>’:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Map<Eigen::Matrix<double, -1, 1> >, const Eigen::Matrix<double, -1, 1> > >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Map<Eigen::Matrix<double, -1, 1> >, const Eigen::Matrix<double, -1, 1> > >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Map<Eigen::Matrix<double, -1, 1> >, const Eigen::Matrix<double, -1, 1>, Eigen::Dense>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Map<Eigen::Matrix<double, -1, 1> >, const Eigen::Matrix<double, -1, 1> >’
ScanBMA_full.cpp:59:28: required from here
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
ScanBMA_full.cpp: In function ‘const List ScanBMA_BIC(Rcpp::NumericVector, Rcpp::NumericMatrix, Rcpp::NumericVector, double)’:
ScanBMA_full.cpp:137:45: warning: ‘const arma::mtOp<unsigned int, T1, arma::op_sort_index> arma::sort_index(const arma::Base<typename T1::elem_type, T1>&, arma::uword) [with T1 = arma::Mat<double>; typename T1::elem_type = double; arma::uword = unsigned int]’ is deprecated [-Wdeprecated-declarations]
arma::uvec pord = sort_index(priorProbs, 1);
^
In file included from /home/biocbuild/bbs-3.10-bioc/R/library/RcppArmadillo/include/armadillo:466:0,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppArmadillo/include/RcppArmadilloForward.h:49,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppArmadillo/include/RcppArmadillo.h:31,
from ScanBMA_full.cpp:5:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppArmadillo/include/armadillo_bits/fn_sort_index.hpp:43:1: note: declared here
sort_index
^~~~~~~~~~
ScanBMA_full.cpp: In function ‘const List BMA_Diff_BIC(Rcpp::NumericVector, Rcpp::NumericMatrix, Rcpp::NumericVector, Rcpp::IntegerVector, bool, bool, Rcpp::IntegerVector, Rcpp::IntegerVector, double, double)’:
ScanBMA_full.cpp:328:43: warning: ‘const arma::mtOp<unsigned int, T1, arma::op_sort_index> arma::sort_index(const arma::Base<typename T1::elem_type, T1>&, arma::uword) [with T1 = arma::Mat<double>; typename T1::elem_type = double; arma::uword = unsigned int]’ is deprecated [-Wdeprecated-declarations]
arma::uvec pord = sort_index(priorProbs, 1);
^
In file included from /home/biocbuild/bbs-3.10-bioc/R/library/RcppArmadillo/include/armadillo:466:0,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppArmadillo/include/RcppArmadilloForward.h:49,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppArmadillo/include/RcppArmadillo.h:31,
from ScanBMA_full.cpp:5:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppArmadillo/include/armadillo_bits/fn_sort_index.hpp:43:1: note: declared here
sort_index
^~~~~~~~~~
ScanBMA_full.cpp: In function ‘const List ScanBMA_g(Rcpp::NumericVector, Rcpp::NumericMatrix, Rcpp::NumericVector, double, double)’:
ScanBMA_full.cpp:421:45: warning: ‘const arma::mtOp<unsigned int, T1, arma::op_sort_index> arma::sort_index(const arma::Base<typename T1::elem_type, T1>&, arma::uword) [with T1 = arma::Mat<double>; typename T1::elem_type = double; arma::uword = unsigned int]’ is deprecated [-Wdeprecated-declarations]
arma::uvec pord = sort_index(priorProbs, 1);
^
In file included from /home/biocbuild/bbs-3.10-bioc/R/library/RcppArmadillo/include/armadillo:466:0,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppArmadillo/include/RcppArmadilloForward.h:49,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppArmadillo/include/RcppArmadillo.h:31,
from ScanBMA_full.cpp:5:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppArmadillo/include/armadillo_bits/fn_sort_index.hpp:43:1: note: declared here
sort_index
^~~~~~~~~~
ScanBMA_full.cpp: In function ‘const List BMA_Diff_g(Rcpp::NumericVector, Rcpp::NumericMatrix, Rcpp::NumericVector, double, Rcpp::IntegerVector, bool, bool, Rcpp::IntegerVector, Rcpp::IntegerVector, double, double)’:
ScanBMA_full.cpp:614:43: warning: ‘const arma::mtOp<unsigned int, T1, arma::op_sort_index> arma::sort_index(const arma::Base<typename T1::elem_type, T1>&, arma::uword) [with T1 = arma::Mat<double>; typename T1::elem_type = double; arma::uword = unsigned int]’ is deprecated [-Wdeprecated-declarations]
arma::uvec pord = sort_index(priorProbs, 1);
^
In file included from /home/biocbuild/bbs-3.10-bioc/R/library/RcppArmadillo/include/armadillo:466:0,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppArmadillo/include/RcppArmadilloForward.h:49,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppArmadillo/include/RcppArmadillo.h:31,
from ScanBMA_full.cpp:5:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppArmadillo/include/armadillo_bits/fn_sort_index.hpp:43:1: note: declared here
sort_index
^~~~~~~~~~
In file included from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/Core:434:0,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from ScanBMA_full.cpp:6:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, -1, -1> >, 0>’:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, -1, -1> > >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, -1, -1> > >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from ‘class Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, -1, -1> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:327:30: required from ‘Derived& Eigen::DenseBase<Derived>::setConstant(const Scalar&) [with Derived = Eigen::Matrix<double, -1, -1>; Eigen::DenseBase<Derived>::Scalar = double]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:501:21: required from ‘Derived& Eigen::DenseBase<Derived>::setZero() [with Derived = Eigen::Matrix<double, -1, -1>]’
ScanBMA_full.cpp:56:49: required from here
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
>::type PacketReturnType;
^~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, 0>’:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, 1>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, 3>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from ‘class Eigen::internal::BlockImpl_dense<Eigen::Matrix<double, -1, -1>, -1, 1, true, true>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: required from ‘class Eigen::BlockImpl<Eigen::Matrix<double, -1, -1>, -1, 1, true, Eigen::Dense>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from ‘class Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:441:39: required from ‘Eigen::LLT<MatrixType, _UpLo>& Eigen::LLT<MatrixType, UpLo>::compute(const Eigen::EigenBase<OtherDerived>&) [with InputType = Eigen::SelfAdjointView<Eigen::Matrix<double, -1, -1>, 1>; _MatrixType = Eigen::Matrix<double, -1, -1>; int _UpLo = 1]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:115:14: required from ‘Eigen::LLT<MatrixType, UpLo>::LLT(Eigen::EigenBase<OtherDerived>&) [with InputType = Eigen::SelfAdjointView<Eigen::Matrix<double, -1, -1>, 1>; _MatrixType = Eigen::Matrix<double, -1, -1>; int _UpLo = 1]’
ScanBMA_full.cpp:56:99: required from here
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, -1, 1, false>, 0>’:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, -1, 1, false>, 1>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, -1, 1, false>, 3>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, -1, 1, false> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, -1, 1, false> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, -1, 1, false>, 0>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:219:34: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: required from ‘class Eigen::BlockImpl<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, -1, 1, false, Eigen::Dense>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from ‘class Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, -1, 1, false>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/VectorBlock.h:56:47: required from ‘class Eigen::VectorBlock<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, -1>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:441:65: required from ‘Eigen::LLT<MatrixType, _UpLo>& Eigen::LLT<MatrixType, UpLo>::compute(const Eigen::EigenBase<OtherDerived>&) [with InputType = Eigen::SelfAdjointView<Eigen::Matrix<double, -1, -1>, 1>; _MatrixType = Eigen::Matrix<double, -1, -1>; int _UpLo = 1]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:115:14: required from ‘Eigen::LLT<MatrixType, UpLo>::LLT(Eigen::EigenBase<OtherDerived>&) [with InputType = Eigen::SelfAdjointView<Eigen::Matrix<double, -1, -1>, 1>; _MatrixType = Eigen::Matrix<double, -1, -1>; int _UpLo = 1]’
ScanBMA_full.cpp:56:99: required from here
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, 0>’:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, 1>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, 3>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from ‘class Eigen::internal::BlockImpl_dense<Eigen::Matrix<double, -1, -1>, 1, -1, false, true>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: required from ‘class Eigen::BlockImpl<Eigen::Matrix<double, -1, -1>, 1, -1, false, Eigen::Dense>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from ‘class Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:441:97: required from ‘Eigen::LLT<MatrixType, _UpLo>& Eigen::LLT<MatrixType, UpLo>::compute(const Eigen::EigenBase<OtherDerived>&) [with InputType = Eigen::SelfAdjointView<Eigen::Matrix<double, -1, -1>, 1>; _MatrixType = Eigen::Matrix<double, -1, -1>; int _UpLo = 1]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:115:14: required from ‘Eigen::LLT<MatrixType, UpLo>::LLT(Eigen::EigenBase<OtherDerived>&) [with InputType = Eigen::SelfAdjointView<Eigen::Matrix<double, -1, -1>, 1>; _MatrixType = Eigen::Matrix<double, -1, -1>; int _UpLo = 1]’
ScanBMA_full.cpp:56:99: required from here
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, 1, -1, false>, 0>’:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, 1, -1, false>, 1>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, 1, -1, false>, 3>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, 1, -1, false> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, 1, -1, false> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, 1, -1, false>, 0>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:219:34: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: required from ‘class Eigen::BlockImpl<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, 1, -1, false, Eigen::Dense>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from ‘class Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, 1, -1, false>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/VectorBlock.h:56:47: required from ‘class Eigen::VectorBlock<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, -1>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:441:116: required from ‘Eigen::LLT<MatrixType, _UpLo>& Eigen::LLT<MatrixType, UpLo>::compute(const Eigen::EigenBase<OtherDerived>&) [with InputType = Eigen::SelfAdjointView<Eigen::Matrix<double, -1, -1>, 1>; _MatrixType = Eigen::Matrix<double, -1, -1>; int _UpLo = 1]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:115:14: required from ‘Eigen::LLT<MatrixType, UpLo>::LLT(Eigen::EigenBase<OtherDerived>&) [with InputType = Eigen::SelfAdjointView<Eigen::Matrix<double, -1, -1>, 1>; _MatrixType = Eigen::Matrix<double, -1, -1>; int _UpLo = 1]’
ScanBMA_full.cpp:56:99: required from here
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_conj_product_op<double, double>, const Eigen::Matrix<double, -1, 1>, const Eigen::Matrix<double, -1, 1> >, 0>’:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_conj_product_op<double, double>, const Eigen::Matrix<double, -1, 1>, const Eigen::Matrix<double, -1, 1> > >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_conj_product_op<double, double>, const Eigen::Matrix<double, -1, 1>, const Eigen::Matrix<double, -1, 1> > >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_conj_product_op<double, double>, const Eigen::Matrix<double, -1, 1>, const Eigen::Matrix<double, -1, 1>, Eigen::Dense>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_conj_product_op<double, double>, const Eigen::Matrix<double, -1, 1>, const Eigen::Matrix<double, -1, 1> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:37:48: required from ‘static Eigen::internal::dot_nocheck<T, U, NeedToTranspose>::ResScalar Eigen::internal::dot_nocheck<T, U, NeedToTranspose>::run(const Eigen::MatrixBase<Derived>&, const Eigen::MatrixBase<U>&) [with T = Eigen::Matrix<double, -1, 1>; U = Eigen::Matrix<double, -1, 1>; bool NeedToTranspose = false; Eigen::internal::dot_nocheck<T, U, NeedToTranspose>::ResScalar = double]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:84:58: required from ‘typename Eigen::ScalarBinaryOpTraits<typename Eigen::internal::traits<T>::Scalar, typename Eigen::internal::traits<OtherDerived>::Scalar>::ReturnType Eigen::MatrixBase<Derived>::dot(const Eigen::MatrixBase<OtherDerived>&) const [with OtherDerived = Eigen::Matrix<double, -1, 1>; Derived = Eigen::Matrix<double, -1, 1>; typename Eigen::ScalarBinaryOpTraits<typename Eigen::internal::traits<T>::Scalar, typename Eigen::internal::traits<OtherDerived>::Scalar>::ReturnType = double]’
ScanBMA_full.cpp:60:35: required from here
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
In file included from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/Core:491:0,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from ScanBMA_full.cpp:6:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h: In instantiation of ‘class Eigen::internal::gebp_traits<double, double, false, false>’:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrixTriangular.h:69:75: required from ‘static void Eigen::internal::general_matrix_matrix_triangular_product<Index, LhsScalar, LhsStorageOrder, ConjugateLhs, RhsScalar, RhsStorageOrder, ConjugateRhs, 0, UpLo, Version>::run(Index, Index, const LhsScalar*, Index, const RhsScalar*, Index, Eigen::internal::general_matrix_matrix_triangular_product<Index, LhsScalar, LhsStorageOrder, ConjugateLhs, RhsScalar, RhsStorageOrder, ConjugateRhs, 0, UpLo, Version>::ResScalar*, Index, const ResScalar&, Eigen::internal::level3_blocking<LhsScalar, RhsScalar>&) [with Index = long int; LhsScalar = double; int LhsStorageOrder = 1; bool ConjugateLhs = false; RhsScalar = double; int RhsStorageOrder = 0; bool ConjugateRhs = false; int UpLo = 1; int Version = 0; Eigen::internal::general_matrix_matrix_triangular_product<Index, LhsScalar, LhsStorageOrder, ConjugateLhs, RhsScalar, RhsStorageOrder, ConjugateRhs, 0, UpLo, Version>::ResScalar = double]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/SelfadjointProduct.h:113:12: required from ‘static void Eigen::selfadjoint_product_selector<MatrixType, OtherType, UpLo, false>::run(MatrixType&, const OtherType&, const typename MatrixType::Scalar&) [with MatrixType = Eigen::Matrix<double, -1, -1>; OtherType = Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >; int UpLo = 1; typename MatrixType::Scalar = double]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/SelfadjointProduct.h:126:62: required from ‘Eigen::SelfAdjointView<MatrixType, UpLo>& Eigen::SelfAdjointView<MatrixType, Mode>::rankUpdate(const Eigen::MatrixBase<OtherDerived>&, const Scalar&) [with DerivedU = Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >; _MatrixType = Eigen::Matrix<double, -1, -1>; unsigned int UpLo = 1; Eigen::SelfAdjointView<MatrixType, Mode>::Scalar = double]’
ScanBMA_full.cpp:56:98: required from here
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:390:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
typedef typename conditional<Vectorizable,_LhsPacket,LhsScalar>::type LhsPacket;
^~~~~~~~~
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:391:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
typedef typename conditional<Vectorizable,_RhsPacket,RhsScalar>::type RhsPacket;
^~~~~~~~~
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:392:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
typedef typename conditional<Vectorizable,_ResPacket,ResScalar>::type ResPacket;
^~~~~~~~~
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h: In instantiation of ‘void Eigen::internal::gemm_pack_rhs<Scalar, Index, DataMapper, nr, 0, Conjugate, PanelMode>::operator()(Scalar*, const DataMapper&, Index, Index, Index, Index) [with Scalar = double; Index = long int; DataMapper = Eigen::internal::const_blas_data_mapper<double, long int, 0>; int nr = 4; bool Conjugate = false; bool PanelMode = false]’:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrixTriangular.h:97:15: required from ‘static void Eigen::internal::general_matrix_matrix_triangular_product<Index, LhsScalar, LhsStorageOrder, ConjugateLhs, RhsScalar, RhsStorageOrder, ConjugateRhs, 0, UpLo, Version>::run(Index, Index, const LhsScalar*, Index, const RhsScalar*, Index, Eigen::internal::general_matrix_matrix_triangular_product<Index, LhsScalar, LhsStorageOrder, ConjugateLhs, RhsScalar, RhsStorageOrder, ConjugateRhs, 0, UpLo, Version>::ResScalar*, Index, const ResScalar&, Eigen::internal::level3_blocking<LhsScalar, RhsScalar>&) [with Index = long int; LhsScalar = double; int LhsStorageOrder = 1; bool ConjugateLhs = false; RhsScalar = double; int RhsStorageOrder = 0; bool ConjugateRhs = false; int UpLo = 1; int Version = 0; Eigen::internal::general_matrix_matrix_triangular_product<Index, LhsScalar, LhsStorageOrder, ConjugateLhs, RhsScalar, RhsStorageOrder, ConjugateRhs, 0, UpLo, Version>::ResScalar = double]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/SelfadjointProduct.h:113:12: required from ‘static void Eigen::selfadjoint_product_selector<MatrixType, OtherType, UpLo, false>::run(MatrixType&, const OtherType&, const typename MatrixType::Scalar&) [with MatrixType = Eigen::Matrix<double, -1, -1>; OtherType = Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >; int UpLo = 1; typename MatrixType::Scalar = double]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/SelfadjointProduct.h:126:62: required from ‘Eigen::SelfAdjointView<MatrixType, UpLo>& Eigen::SelfAdjointView<MatrixType, Mode>::rankUpdate(const Eigen::MatrixBase<OtherDerived>&, const Scalar&) [with DerivedU = Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >; _MatrixType = Eigen::Matrix<double, -1, -1>; unsigned int UpLo = 1; Eigen::SelfAdjointView<MatrixType, Mode>::Scalar = double]’
ScanBMA_full.cpp:56:98: required from here
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1980:62: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
PacketBlock<Packet,(PacketSize%4)==0?4:PacketSize> kernel;
^~~~~~
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h: In instantiation of ‘void Eigen::internal::gemm_pack_lhs<Scalar, Index, DataMapper, Pack1, Pack2, 1, Conjugate, PanelMode>::operator()(Scalar*, const DataMapper&, Index, Index, Index, Index) [with Scalar = double; Index = long int; DataMapper = Eigen::internal::const_blas_data_mapper<double, long int, 1>; int Pack1 = 4; int Pack2 = 2; bool Conjugate = false; bool PanelMode = false]’:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrixTriangular.h:103:17: required from ‘static void Eigen::internal::general_matrix_matrix_triangular_product<Index, LhsScalar, LhsStorageOrder, ConjugateLhs, RhsScalar, RhsStorageOrder, ConjugateRhs, 0, UpLo, Version>::run(Index, Index, const LhsScalar*, Index, const RhsScalar*, Index, Eigen::internal::general_matrix_matrix_triangular_product<Index, LhsScalar, LhsStorageOrder, ConjugateLhs, RhsScalar, RhsStorageOrder, ConjugateRhs, 0, UpLo, Version>::ResScalar*, Index, const ResScalar&, Eigen::internal::level3_blocking<LhsScalar, RhsScalar>&) [with Index = long int; LhsScalar = double; int LhsStorageOrder = 1; bool ConjugateLhs = false; RhsScalar = double; int RhsStorageOrder = 0; bool ConjugateRhs = false; int UpLo = 1; int Version = 0; Eigen::internal::general_matrix_matrix_triangular_product<Index, LhsScalar, LhsStorageOrder, ConjugateLhs, RhsScalar, RhsStorageOrder, ConjugateRhs, 0, UpLo, Version>::ResScalar = double]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/SelfadjointProduct.h:113:12: required from ‘static void Eigen::selfadjoint_product_selector<MatrixType, OtherType, UpLo, false>::run(MatrixType&, const OtherType&, const typename MatrixType::Scalar&) [with MatrixType = Eigen::Matrix<double, -1, -1>; OtherType = Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >; int UpLo = 1; typename MatrixType::Scalar = double]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/SelfadjointProduct.h:126:62: required from ‘Eigen::SelfAdjointView<MatrixType, UpLo>& Eigen::SelfAdjointView<MatrixType, Mode>::rankUpdate(const Eigen::MatrixBase<OtherDerived>&, const Scalar&) [with DerivedU = Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >; _MatrixType = Eigen::Matrix<double, -1, -1>; unsigned int UpLo = 1; Eigen::SelfAdjointView<MatrixType, Mode>::Scalar = double]’
ScanBMA_full.cpp:56:98: required from here
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1846:33: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
PacketBlock<Packet> kernel;
^~~~~~
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1846:33: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h: In instantiation of ‘void Eigen::internal::gebp_kernel<LhsScalar, RhsScalar, Index, DataMapper, mr, nr, ConjugateLhs, ConjugateRhs>::operator()(const DataMapper&, const LhsScalar*, const RhsScalar*, Index, Index, Index, Eigen::internal::gebp_kernel<LhsScalar, RhsScalar, Index, DataMapper, mr, nr, ConjugateLhs, ConjugateRhs>::ResScalar, Index, Index, Index, Index) [with LhsScalar = double; RhsScalar = double; Index = long int; DataMapper = Eigen::internal::blas_data_mapper<double, long int, 0, 0>; int mr = 4; int nr = 4; bool ConjugateLhs = false; bool ConjugateRhs = false; Eigen::internal::gebp_kernel<LhsScalar, RhsScalar, Index, DataMapper, mr, nr, ConjugateLhs, ConjugateRhs>::ResScalar = double]’:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrixTriangular.h:110:15: required from ‘static void Eigen::internal::general_matrix_matrix_triangular_product<Index, LhsScalar, LhsStorageOrder, ConjugateLhs, RhsScalar, RhsStorageOrder, ConjugateRhs, 0, UpLo, Version>::run(Index, Index, const LhsScalar*, Index, const RhsScalar*, Index, Eigen::internal::general_matrix_matrix_triangular_product<Index, LhsScalar, LhsStorageOrder, ConjugateLhs, RhsScalar, RhsStorageOrder, ConjugateRhs, 0, UpLo, Version>::ResScalar*, Index, const ResScalar&, Eigen::internal::level3_blocking<LhsScalar, RhsScalar>&) [with Index = long int; LhsScalar = double; int LhsStorageOrder = 1; bool ConjugateLhs = false; RhsScalar = double; int RhsStorageOrder = 0; bool ConjugateRhs = false; int UpLo = 1; int Version = 0; Eigen::internal::general_matrix_matrix_triangular_product<Index, LhsScalar, LhsStorageOrder, ConjugateLhs, RhsScalar, RhsStorageOrder, ConjugateRhs, 0, UpLo, Version>::ResScalar = double]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/SelfadjointProduct.h:113:12: required from ‘static void Eigen::selfadjoint_product_selector<MatrixType, OtherType, UpLo, false>::run(MatrixType&, const OtherType&, const typename MatrixType::Scalar&) [with MatrixType = Eigen::Matrix<double, -1, -1>; OtherType = Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >; int UpLo = 1; typename MatrixType::Scalar = double]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/SelfadjointProduct.h:126:62: required from ‘Eigen::SelfAdjointView<MatrixType, UpLo>& Eigen::SelfAdjointView<MatrixType, Mode>::rankUpdate(const Eigen::MatrixBase<OtherDerived>&, const Scalar&) [with DerivedU = Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >; _MatrixType = Eigen::Matrix<double, -1, -1>; unsigned int UpLo = 1; Eigen::SelfAdjointView<MatrixType, Mode>::Scalar = double]’
ScanBMA_full.cpp:56:98: required from here
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1536:21: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half {aka __vector(2) double}’ [-Wignored-attributes]
const int SResPacketHalfSize = unpacket_traits<typename unpacket_traits<SResPacket>::half>::size;
^~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1591:135: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half {aka __vector(2) double}’ [-Wignored-attributes]
typedef typename conditional<SwappedTraits::LhsProgress>=8,typename unpacket_traits<SResPacket>::half,SResPacket>::type SResPacketHalf;
^~~~~~~~~~~~~~
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1592:135: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half {aka __vector(2) double}’ [-Wignored-attributes]
typedef typename conditional<SwappedTraits::LhsProgress>=8,typename unpacket_traits<SLhsPacket>::half,SLhsPacket>::type SLhsPacketHalf;
^~~~~~~~~~~~~~
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1593:135: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half {aka __vector(2) double}’ [-Wignored-attributes]
typedef typename conditional<SwappedTraits::LhsProgress>=8,typename unpacket_traits<SLhsPacket>::half,SRhsPacket>::type SRhsPacketHalf;
^~~~~~~~~~~~~~
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1594:135: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half {aka __vector(2) double}’ [-Wignored-attributes]
typedef typename conditional<SwappedTraits::LhsProgress>=8,typename unpacket_traits<SAccPacket>::half,SAccPacket>::type SAccPacketHalf;
^~~~~~~~~~~~~~
In file included from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/Core:367:0,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from ScanBMA_full.cpp:6:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<double, 16>’:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits<Eigen::Matrix<double, 4, 4> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<double, 4, 4> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix<double, 4, 4>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrixTriangular.h:151:52: required from ‘void Eigen::internal::tribb_kernel<LhsScalar, RhsScalar, Index, mr, nr, ConjLhs, ConjRhs, UpLo>::operator()(Eigen::internal::tribb_kernel<LhsScalar, RhsScalar, Index, mr, nr, ConjLhs, ConjRhs, UpLo>::ResScalar*, Index, const LhsScalar*, const RhsScalar*, Index, Index, const ResScalar&) [with LhsScalar = double; RhsScalar = double; Index = long int; int mr = 4; int nr = 4; bool ConjLhs = false; bool ConjRhs = false; int UpLo = 1; Eigen::internal::tribb_kernel<LhsScalar, RhsScalar, Index, mr, nr, ConjLhs, ConjRhs, UpLo>::ResScalar = double]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrixTriangular.h:114:13: required from ‘static void Eigen::internal::general_matrix_matrix_triangular_product<Index, LhsScalar, LhsStorageOrder, ConjugateLhs, RhsScalar, RhsStorageOrder, ConjugateRhs, 0, UpLo, Version>::run(Index, Index, const LhsScalar*, Index, const RhsScalar*, Index, Eigen::internal::general_matrix_matrix_triangular_product<Index, LhsScalar, LhsStorageOrder, ConjugateLhs, RhsScalar, RhsStorageOrder, ConjugateRhs, 0, UpLo, Version>::ResScalar*, Index, const ResScalar&, Eigen::internal::level3_blocking<LhsScalar, RhsScalar>&) [with Index = long int; LhsScalar = double; int LhsStorageOrder = 1; bool ConjugateLhs = false; RhsScalar = double; int RhsStorageOrder = 0; bool ConjugateRhs = false; int UpLo = 1; int Version = 0; Eigen::internal::general_matrix_matrix_triangular_product<Index, LhsScalar, LhsStorageOrder, ConjugateLhs, RhsScalar, RhsStorageOrder, ConjugateRhs, 0, UpLo, Version>::ResScalar = double]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/SelfadjointProduct.h:113:12: required from ‘static void Eigen::selfadjoint_product_selector<MatrixType, OtherType, UpLo, false>::run(MatrixType&, const OtherType&, const typename MatrixType::Scalar&) [with MatrixType = Eigen::Matrix<double, -1, -1>; OtherType = Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >; int UpLo = 1; typename MatrixType::Scalar = double]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/SelfadjointProduct.h:126:62: required from ‘Eigen::SelfAdjointView<MatrixType, UpLo>& Eigen::SelfAdjointView<MatrixType, Mode>::rankUpdate(const Eigen::MatrixBase<OtherDerived>&, const Scalar&) [with DerivedU = Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >; _MatrixType = Eigen::Matrix<double, -1, -1>; unsigned int UpLo = 1; Eigen::SelfAdjointView<MatrixType, Mode>::Scalar = double]’
ScanBMA_full.cpp:56:98: required from here
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:170:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:188:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
^~~~
In file included from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/Core:434:0,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from ScanBMA_full.cpp:6:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, 4, 4>, 0>’:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, 4, 4>, 1>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, 4, 4>, 3>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Matrix<double, 4, 4> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Matrix<double, 4, 4> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<double, 4, 4> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix<double, 4, 4>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrixTriangular.h:151:52: required from ‘void Eigen::internal::tribb_kernel<LhsScalar, RhsScalar, Index, mr, nr, ConjLhs, ConjRhs, UpLo>::operator()(Eigen::internal::tribb_kernel<LhsScalar, RhsScalar, Index, mr, nr, ConjLhs, ConjRhs, UpLo>::ResScalar*, Index, const LhsScalar*, const RhsScalar*, Index, Index, const ResScalar&) [with LhsScalar = double; RhsScalar = double; Index = long int; int mr = 4; int nr = 4; bool ConjLhs = false; bool ConjRhs = false; int UpLo = 1; Eigen::internal::tribb_kernel<LhsScalar, RhsScalar, Index, mr, nr, ConjLhs, ConjRhs, UpLo>::ResScalar = double]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrixTriangular.h:114:13: required from ‘static void Eigen::internal::general_matrix_matrix_triangular_product<Index, LhsScalar, LhsStorageOrder, ConjugateLhs, RhsScalar, RhsStorageOrder, ConjugateRhs, 0, UpLo, Version>::run(Index, Index, const LhsScalar*, Index, const RhsScalar*, Index, Eigen::internal::general_matrix_matrix_triangular_product<Index, LhsScalar, LhsStorageOrder, ConjugateLhs, RhsScalar, RhsStorageOrder, ConjugateRhs, 0, UpLo, Version>::ResScalar*, Index, const ResScalar&, Eigen::internal::level3_blocking<LhsScalar, RhsScalar>&) [with Index = long int; LhsScalar = double; int LhsStorageOrder = 1; bool ConjugateLhs = false; RhsScalar = double; int RhsStorageOrder = 0; bool ConjugateRhs = false; int UpLo = 1; int Version = 0; Eigen::internal::general_matrix_matrix_triangular_product<Index, LhsScalar, LhsStorageOrder, ConjugateLhs, RhsScalar, RhsStorageOrder, ConjugateRhs, 0, UpLo, Version>::ResScalar = double]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/SelfadjointProduct.h:113:12: required from ‘static void Eigen::selfadjoint_product_selector<MatrixType, OtherType, UpLo, false>::run(MatrixType&, const OtherType&, const typename MatrixType::Scalar&) [with MatrixType = Eigen::Matrix<double, -1, -1>; OtherType = Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >; int UpLo = 1; typename MatrixType::Scalar = double]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/SelfadjointProduct.h:126:62: required from ‘Eigen::SelfAdjointView<MatrixType, UpLo>& Eigen::SelfAdjointView<MatrixType, Mode>::rankUpdate(const Eigen::MatrixBase<OtherDerived>&, const Scalar&) [with DerivedU = Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >; _MatrixType = Eigen::Matrix<double, -1, -1>; unsigned int UpLo = 1; Eigen::SelfAdjointView<MatrixType, Mode>::Scalar = double]’
ScanBMA_full.cpp:56:98: required from here
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
>::type PacketReturnType;
^~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs_op<double>, const Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, -1, 1, false> >, 0>’:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs_op<double>, const Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, -1, 1, false> > >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs_op<double>, const Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, -1, 1, false> > >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from ‘class Eigen::CwiseUnaryOpImpl<Eigen::internal::scalar_abs_op<double>, const Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, -1, 1, false>, Eigen::Dense>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from ‘class Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs_op<double>, const Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, -1, 1, false> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:221:25: required from ‘static typename Eigen::NumTraits<typename Eigen::internal::traits<T>::Scalar>::Real Eigen::internal::lpNorm_selector<Derived, 1>::run(const Eigen::MatrixBase<Derived>&) [with Derived = Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, -1, 1, false>; typename Eigen::NumTraits<typename Eigen::internal::traits<T>::Scalar>::Real = double]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:269:52: required from ‘typename Eigen::NumTraits<typename Eigen::internal::traits<T>::Scalar>::Real Eigen::MatrixBase<Derived>::lpNorm() const [with int p = 1; Derived = Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, -1, 1, false>; typename Eigen::NumTraits<typename Eigen::internal::traits<T>::Scalar>::Real = double]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:441:77: required from ‘Eigen::LLT<MatrixType, _UpLo>& Eigen::LLT<MatrixType, UpLo>::compute(const Eigen::EigenBase<OtherDerived>&) [with InputType = Eigen::SelfAdjointView<Eigen::Matrix<double, -1, -1>, 1>; _MatrixType = Eigen::Matrix<double, -1, -1>; int _UpLo = 1]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:115:14: required from ‘Eigen::LLT<MatrixType, UpLo>::LLT(Eigen::EigenBase<OtherDerived>&) [with InputType = Eigen::SelfAdjointView<Eigen::Matrix<double, -1, -1>, 1>; _MatrixType = Eigen::Matrix<double, -1, -1>; int _UpLo = 1]’
ScanBMA_full.cpp:56:99: required from here
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs_op<double>, const Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, 1, -1, false> >, 0>’:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs_op<double>, const Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, 1, -1, false> > >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs_op<double>, const Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, 1, -1, false> > >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from ‘class Eigen::CwiseUnaryOpImpl<Eigen::internal::scalar_abs_op<double>, const Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, 1, -1, false>, Eigen::Dense>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from ‘class Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs_op<double>, const Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, 1, -1, false> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:221:25: required from ‘static typename Eigen::NumTraits<typename Eigen::internal::traits<T>::Scalar>::Real Eigen::internal::lpNorm_selector<Derived, 1>::run(const Eigen::MatrixBase<Derived>&) [with Derived = Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, 1, -1, false>; typename Eigen::NumTraits<typename Eigen::internal::traits<T>::Scalar>::Real = double]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:269:52: required from ‘typename Eigen::NumTraits<typename Eigen::internal::traits<T>::Scalar>::Real Eigen::MatrixBase<Derived>::lpNorm() const [with int p = 1; Derived = Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, 1, -1, false>; typename Eigen::NumTraits<typename Eigen::internal::traits<T>::Scalar>::Real = double]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:441:77: required from ‘Eigen::LLT<MatrixType, _UpLo>& Eigen::LLT<MatrixType, UpLo>::compute(const Eigen::EigenBase<OtherDerived>&) [with InputType = Eigen::SelfAdjointView<Eigen::Matrix<double, -1, -1>, 1>; _MatrixType = Eigen::Matrix<double, -1, -1>; int _UpLo = 1]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:115:14: required from ‘Eigen::LLT<MatrixType, UpLo>::LLT(Eigen::EigenBase<OtherDerived>&) [with InputType = Eigen::SelfAdjointView<Eigen::Matrix<double, -1, -1>, 1>; _MatrixType = Eigen::Matrix<double, -1, -1>; int _UpLo = 1]’
ScanBMA_full.cpp:56:99: required from here
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>, 0>’:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>, 1>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>, 3>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>, 0>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:219:34: [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from ‘class Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:351:41: required from ‘static Eigen::Index Eigen::internal::llt_inplace<Scalar, 1>::blocked(MatrixType&) [with MatrixType = Eigen::Matrix<double, -1, -1>; Scalar = double; Eigen::Index = long int]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:401:68: required from ‘static bool Eigen::internal::LLT_Traits<MatrixType, 1>::inplace_decomposition(MatrixType&) [with MatrixType = Eigen::Matrix<double, -1, -1>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:449:42: required from ‘Eigen::LLT<MatrixType, _UpLo>& Eigen::LLT<MatrixType, UpLo>::compute(const Eigen::EigenBase<OtherDerived>&) [with InputType = Eigen::SelfAdjointView<Eigen::Matrix<double, -1, -1>, 1>; _MatrixType = Eigen::Matrix<double, -1, -1>; int _UpLo = 1]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:115:14: required from ‘Eigen::LLT<MatrixType, UpLo>::LLT(Eigen::EigenBase<OtherDerived>&) [with InputType = Eigen::SelfAdjointView<Eigen::Matrix<double, -1, -1>, 1>; _MatrixType = Eigen::Matrix<double, -1, -1>; int _UpLo = 1]’
ScanBMA_full.cpp:56:99: required from here
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false> >, 0>’:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false> >, 2>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Transpose<const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false> > >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Transpose<const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false> > >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:115:37: required from ‘class Eigen::TransposeImpl<const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>, Eigen::Dense>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from ‘class Eigen::Transpose<const Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:357:39: required from ‘static Eigen::Index Eigen::internal::llt_inplace<Scalar, 1>::blocked(MatrixType&) [with MatrixType = Eigen::Matrix<double, -1, -1>; Scalar = double; Eigen::Index = long int]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:401:68: required from ‘static bool Eigen::internal::LLT_Traits<MatrixType, 1>::inplace_decomposition(MatrixType&) [with MatrixType = Eigen::Matrix<double, -1, -1>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:449:42: required from ‘Eigen::LLT<MatrixType, _UpLo>& Eigen::LLT<MatrixType, UpLo>::compute(const Eigen::EigenBase<OtherDerived>&) [with InputType = Eigen::SelfAdjointView<Eigen::Matrix<double, -1, -1>, 1>; _MatrixType = Eigen::Matrix<double, -1, -1>; int _UpLo = 1]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:115:14: required from ‘Eigen::LLT<MatrixType, UpLo>::LLT(Eigen::EigenBase<OtherDerived>&) [with InputType = Eigen::SelfAdjointView<Eigen::Matrix<double, -1, -1>, 1>; _MatrixType = Eigen::Matrix<double, -1, -1>; int _UpLo = 1]’
ScanBMA_full.cpp:56:99: required from here
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase<Derived>&) [with Derived = Eigen::Map<Eigen::Matrix<double, -1, 1> >; Eigen::Index = long int]’:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:225:63: required from ‘static Eigen::internal::redux_impl<Func, Derived, 3, 0>::Scalar Eigen::internal::redux_impl<Func, Derived, 3, 0>::run(const Derived&, const Func&) [with Func = Eigen::internal::scalar_sum_op<double, double>; Derived = Eigen::internal::redux_evaluator<Eigen::Map<Eigen::Matrix<double, -1, 1> > >; Eigen::internal::redux_impl<Func, Derived, 3, 0>::Scalar = double]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op<double, double>; Derived = Eigen::Map<Eigen::Matrix<double, -1, 1> >; typename Eigen::internal::traits<T>::Scalar = double]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:453:73: required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::sum() const [with Derived = Eigen::Map<Eigen::Matrix<double, -1, 1> >; typename Eigen::internal::traits<T>::Scalar = double]’
ScanBMA_full.cpp:61:27: required from here
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:650:34: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
return internal::first_aligned<int(unpacket_traits<DefaultPacketType>::alignment),Derived>(m);
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, false>, 0>’:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, false>, 1>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, false>, 3>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, false> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, false> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, false>, 0>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:219:34: [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:316:35: required from ‘static Eigen::Index Eigen::internal::llt_inplace<Scalar, 1>::unblocked(MatrixType&) [with MatrixType = Eigen::Matrix<double, -1, -1>; Scalar = double; Eigen::Index = long int]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:337:23: required from ‘static Eigen::Index Eigen::internal::llt_inplace<Scalar, 1>::blocked(MatrixType&) [with MatrixType = Eigen::Matrix<double, -1, -1>; Scalar = double; Eigen::Index = long int]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:401:68: required from ‘static bool Eigen::internal::LLT_Traits<MatrixType, 1>::inplace_decomposition(MatrixType&) [with MatrixType = Eigen::Matrix<double, -1, -1>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:449:42: required from ‘Eigen::LLT<MatrixType, _UpLo>& Eigen::LLT<MatrixType, UpLo>::compute(const Eigen::EigenBase<OtherDerived>&) [with InputType = Eigen::SelfAdjointView<Eigen::Matrix<double, -1, -1>, 1>; _MatrixType = Eigen::Matrix<double, -1, -1>; int _UpLo = 1]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:115:14: required from ‘Eigen::LLT<MatrixType, UpLo>::LLT(Eigen::EigenBase<OtherDerived>&) [with InputType = Eigen::SelfAdjointView<Eigen::Matrix<double, -1, -1>, 1>; _MatrixType = Eigen::Matrix<double, -1, -1>; int _UpLo = 1]’
ScanBMA_full.cpp:56:99: required from here
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
>::type PacketReturnType;
^~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false> >, 0>’:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false> >, 2>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Transpose<const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false> > >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Transpose<const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false> > >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:115:37: required from ‘class Eigen::TransposeImpl<const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, Eigen::Dense>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from ‘class Eigen::Transpose<const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:325:45: required from ‘static Eigen::Index Eigen::internal::llt_inplace<Scalar, 1>::unblocked(MatrixType&) [with MatrixType = Eigen::Matrix<double, -1, -1>; Scalar = double; Eigen::Index = long int]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:337:23: required from ‘static Eigen::Index Eigen::internal::llt_inplace<Scalar, 1>::blocked(MatrixType&) [with MatrixType = Eigen::Matrix<double, -1, -1>; Scalar = double; Eigen::Index = long int]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:401:68: required from ‘static bool Eigen::internal::LLT_Traits<MatrixType, 1>::inplace_decomposition(MatrixType&) [with MatrixType = Eigen::Matrix<double, -1, -1>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:449:42: required from ‘Eigen::LLT<MatrixType, _UpLo>& Eigen::LLT<MatrixType, UpLo>::compute(const Eigen::EigenBase<OtherDerived>&) [with InputType = Eigen::SelfAdjointView<Eigen::Matrix<double, -1, -1>, 1>; _MatrixType = Eigen::Matrix<double, -1, -1>; int _UpLo = 1]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:115:14: required from ‘Eigen::LLT<MatrixType, UpLo>::LLT(Eigen::EigenBase<OtherDerived>&) [with InputType = Eigen::SelfAdjointView<Eigen::Matrix<double, -1, -1>, 1>; _MatrixType = Eigen::Matrix<double, -1, -1>; int _UpLo = 1]’
ScanBMA_full.cpp:56:99: required from here
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Product<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>, Eigen::Transpose<const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false> >, 0>, 0>’:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Product<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>, Eigen::Transpose<const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false> >, 0> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Product<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>, Eigen::Transpose<const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false> >, 0> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from ‘class Eigen::internal::dense_product_base<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>, Eigen::Transpose<const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false> >, 0, 7>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from ‘class Eigen::ProductImpl<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>, Eigen::Transpose<const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false> >, 0, Eigen::Dense>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>, Eigen::Transpose<const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false> >, 0>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:325:45: required from ‘static Eigen::Index Eigen::internal::llt_inplace<Scalar, 1>::unblocked(MatrixType&) [with MatrixType = Eigen::Matrix<double, -1, -1>; Scalar = double; Eigen::Index = long int]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:337:23: required from ‘static Eigen::Index Eigen::internal::llt_inplace<Scalar, 1>::blocked(MatrixType&) [with MatrixType = Eigen::Matrix<double, -1, -1>; Scalar = double; Eigen::Index = long int]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:401:68: required from ‘static bool Eigen::internal::LLT_Traits<MatrixType, 1>::inplace_decomposition(MatrixType&) [with MatrixType = Eigen::Matrix<double, -1, -1>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:449:42: required from ‘Eigen::LLT<MatrixType, _UpLo>& Eigen::LLT<MatrixType, UpLo>::compute(const Eigen::EigenBase<OtherDerived>&) [with InputType = Eigen::SelfAdjointView<Eigen::Matrix<double, -1, -1>, 1>; _MatrixType = Eigen::Matrix<double, -1, -1>; int _UpLo = 1]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:115:14: required from ‘Eigen::LLT<MatrixType, UpLo>::LLT(Eigen::EigenBase<OtherDerived>&) [with InputType = Eigen::SelfAdjointView<Eigen::Matrix<double, -1, -1>, 1>; _MatrixType = Eigen::Matrix<double, -1, -1>; int _UpLo = 1]’
ScanBMA_full.cpp:56:99: required from here
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>, -1, 1, false>, 0>’:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>, -1, 1, false>, 1>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>, -1, 1, false>, 3>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>, -1, 1, false> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>, -1, 1, false> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>, -1, 1, false>, 0>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:219:34: [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:316:35: required from ‘static Eigen::Index Eigen::internal::llt_inplace<Scalar, 1>::unblocked(MatrixType&) [with MatrixType = Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>; Scalar = double; Eigen::Index = long int]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:356:24: required from ‘static Eigen::Index Eigen::internal::llt_inplace<Scalar, 1>::blocked(MatrixType&) [with MatrixType = Eigen::Matrix<double, -1, -1>; Scalar = double; Eigen::Index = long int]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:401:68: required from ‘static bool Eigen::internal::LLT_Traits<MatrixType, 1>::inplace_decomposition(MatrixType&) [with MatrixType = Eigen::Matrix<double, -1, -1>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:449:42: required from ‘Eigen::LLT<MatrixType, _UpLo>& Eigen::LLT<MatrixType, UpLo>::compute(const Eigen::EigenBase<OtherDerived>&) [with InputType = Eigen::SelfAdjointView<Eigen::Matrix<double, -1, -1>, 1>; _MatrixType = Eigen::Matrix<double, -1, -1>; int _UpLo = 1]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:115:14: required from ‘Eigen::LLT<MatrixType, UpLo>::LLT(Eigen::EigenBase<OtherDerived>&) [with InputType = Eigen::SelfAdjointView<Eigen::Matrix<double, -1, -1>, 1>; _MatrixType = Eigen::Matrix<double, -1, -1>; int _UpLo = 1]’
ScanBMA_full.cpp:56:99: required from here
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>, 1, -1, false>, 0>’:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>, 1, -1, false>, 1>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>, 1, -1, false>, 3>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>, 1, -1, false> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>, 1, -1, false> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>, 1, -1, false>, 0>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:219:34: [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:317:35: required from ‘static Eigen::Index Eigen::internal::llt_inplace<Scalar, 1>::unblocked(MatrixType&) [with MatrixType = Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>; Scalar = double; Eigen::Index = long int]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:356:24: required from ‘static Eigen::Index Eigen::internal::llt_inplace<Scalar, 1>::blocked(MatrixType&) [with MatrixType = Eigen::Matrix<double, -1, -1>; Scalar = double; Eigen::Index = long int]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:401:68: required from ‘static bool Eigen::internal::LLT_Traits<MatrixType, 1>::inplace_decomposition(MatrixType&) [with MatrixType = Eigen::Matrix<double, -1, -1>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:449:42: required from ‘Eigen::LLT<MatrixType, _UpLo>& Eigen::LLT<MatrixType, UpLo>::compute(const Eigen::EigenBase<OtherDerived>&) [with InputType = Eigen::SelfAdjointView<Eigen::Matrix<double, -1, -1>, 1>; _MatrixType = Eigen::Matrix<double, -1, -1>; int _UpLo = 1]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:115:14: required from ‘Eigen::LLT<MatrixType, UpLo>::LLT(Eigen::EigenBase<OtherDerived>&) [with InputType = Eigen::SelfAdjointView<Eigen::Matrix<double, -1, -1>, 1>; _MatrixType = Eigen::Matrix<double, -1, -1>; int _UpLo = 1]’
ScanBMA_full.cpp:56:99: required from here
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>, -1, -1, false>, 0>’:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>, -1, -1, false>, 1>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>, -1, -1, false>, 3>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>, -1, -1, false> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>, -1, -1, false> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>, -1, -1, false>, 0>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:219:34: [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:318:41: required from ‘static Eigen::Index Eigen::internal::llt_inplace<Scalar, 1>::unblocked(MatrixType&) [with MatrixType = Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>; Scalar = double; Eigen::Index = long int]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:356:24: required from ‘static Eigen::Index Eigen::internal::llt_inplace<Scalar, 1>::blocked(MatrixType&) [with MatrixType = Eigen::Matrix<double, -1, -1>; Scalar = double; Eigen::Index = long int]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:401:68: required from ‘static bool Eigen::internal::LLT_Traits<MatrixType, 1>::inplace_decomposition(MatrixType&) [with MatrixType = Eigen::Matrix<double, -1, -1>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:449:42: required from ‘Eigen::LLT<MatrixType, _UpLo>& Eigen::LLT<MatrixType, UpLo>::compute(const Eigen::EigenBase<OtherDerived>&) [with InputType = Eigen::SelfAdjointView<Eigen::Matrix<double, -1, -1>, 1>; _MatrixType = Eigen::Matrix<double, -1, -1>; int _UpLo = 1]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:115:14: required from ‘Eigen::LLT<MatrixType, UpLo>::LLT(Eigen::EigenBase<OtherDerived>&) [with InputType = Eigen::SelfAdjointView<Eigen::Matrix<double, -1, -1>, 1>; _MatrixType = Eigen::Matrix<double, -1, -1>; int _UpLo = 1]’
ScanBMA_full.cpp:56:99: required from here
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<const Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>, 1, -1, false> >, 0>’:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<const Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>, 1, -1, false> >, 2>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Transpose<const Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>, 1, -1, false> > >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Transpose<const Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>, 1, -1, false> > >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:115:37: required from ‘class Eigen::TransposeImpl<const Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>, 1, -1, false>, Eigen::Dense>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from ‘class Eigen::Transpose<const Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>, 1, -1, false> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:325:45: required from ‘static Eigen::Index Eigen::internal::llt_inplace<Scalar, 1>::unblocked(MatrixType&) [with MatrixType = Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>; Scalar = double; Eigen::Index = long int]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:356:24: required from ‘static Eigen::Index Eigen::internal::llt_inplace<Scalar, 1>::blocked(MatrixType&) [with MatrixType = Eigen::Matrix<double, -1, -1>; Scalar = double; Eigen::Index = long int]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:401:68: required from ‘static bool Eigen::internal::LLT_Traits<MatrixType, 1>::inplace_decomposition(MatrixType&) [with MatrixType = Eigen::Matrix<double, -1, -1>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:449:42: required from ‘Eigen::LLT<MatrixType, _UpLo>& Eigen::LLT<MatrixType, UpLo>::compute(const Eigen::EigenBase<OtherDerived>&) [with InputType = Eigen::SelfAdjointView<Eigen::Matrix<double, -1, -1>, 1>; _MatrixType = Eigen::Matrix<double, -1, -1>; int _UpLo = 1]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:115:14: required from ‘Eigen::LLT<MatrixType, UpLo>::LLT(Eigen::EigenBase<OtherDerived>&) [with InputType = Eigen::SelfAdjointView<Eigen::Matrix<double, -1, -1>, 1>; _MatrixType = Eigen::Matrix<double, -1, -1>; int _UpLo = 1]’
ScanBMA_full.cpp:56:99: required from here
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Product<Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>, -1, -1, false>, Eigen::Transpose<const Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>, 1, -1, false> >, 0>, 0>’:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Product<Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>, -1, -1, false>, Eigen::Transpose<const Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>, 1, -1, false> >, 0> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Product<Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>, -1, -1, false>, Eigen::Transpose<const Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>, 1, -1, false> >, 0> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from ‘class Eigen::internal::dense_product_base<Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>, -1, -1, false>, Eigen::Transpose<const Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>, 1, -1, false> >, 0, 7>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from ‘class Eigen::ProductImpl<Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>, -1, -1, false>, Eigen::Transpose<const Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>, 1, -1, false> >, 0, Eigen::Dense>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product<Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>, -1, -1, false>, Eigen::Transpose<const Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>, 1, -1, false> >, 0>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:325:45: required from ‘static Eigen::Index Eigen::internal::llt_inplace<Scalar, 1>::unblocked(MatrixType&) [with MatrixType = Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>; Scalar = double; Eigen::Index = long int]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:356:24: required from ‘static Eigen::Index Eigen::internal::llt_inplace<Scalar, 1>::blocked(MatrixType&) [with MatrixType = Eigen::Matrix<double, -1, -1>; Scalar = double; Eigen::Index = long int]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:401:68: required from ‘static bool Eigen::internal::LLT_Traits<MatrixType, 1>::inplace_decomposition(MatrixType&) [with MatrixType = Eigen::Matrix<double, -1, -1>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:449:42: required from ‘Eigen::LLT<MatrixType, _UpLo>& Eigen::LLT<MatrixType, UpLo>::compute(const Eigen::EigenBase<OtherDerived>&) [with InputType = Eigen::SelfAdjointView<Eigen::Matrix<double, -1, -1>, 1>; _MatrixType = Eigen::Matrix<double, -1, -1>; int _UpLo = 1]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:115:14: required from ‘Eigen::LLT<MatrixType, UpLo>::LLT(Eigen::EigenBase<OtherDerived>&) [with InputType = Eigen::SelfAdjointView<Eigen::Matrix<double, -1, -1>, 1>; _MatrixType = Eigen::Matrix<double, -1, -1>; int _UpLo = 1]’
ScanBMA_full.cpp:56:99: required from here
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, 4, 4> >, 0>’:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, 4, 4> > >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, 4, 4> > >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from ‘class Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, 4, 4> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:327:30: required from ‘Derived& Eigen::DenseBase<Derived>::setConstant(const Scalar&) [with Derived = Eigen::Matrix<double, 4, 4>; Eigen::DenseBase<Derived>::Scalar = double]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:501:21: required from ‘Derived& Eigen::DenseBase<Derived>::setZero() [with Derived = Eigen::Matrix<double, 4, 4>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrixTriangular.h:167:9: required from ‘void Eigen::internal::tribb_kernel<LhsScalar, RhsScalar, Index, mr, nr, ConjLhs, ConjRhs, UpLo>::operator()(Eigen::internal::tribb_kernel<LhsScalar, RhsScalar, Index, mr, nr, ConjLhs, ConjRhs, UpLo>::ResScalar*, Index, const LhsScalar*, const RhsScalar*, Index, Index, const ResScalar&) [with LhsScalar = double; RhsScalar = double; Index = long int; int mr = 4; int nr = 4; bool ConjLhs = false; bool ConjRhs = false; int UpLo = 1; Eigen::internal::tribb_kernel<LhsScalar, RhsScalar, Index, mr, nr, ConjLhs, ConjRhs, UpLo>::ResScalar = double]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrixTriangular.h:114:13: required from ‘static void Eigen::internal::general_matrix_matrix_triangular_product<Index, LhsScalar, LhsStorageOrder, ConjugateLhs, RhsScalar, RhsStorageOrder, ConjugateRhs, 0, UpLo, Version>::run(Index, Index, const LhsScalar*, Index, const RhsScalar*, Index, Eigen::internal::general_matrix_matrix_triangular_product<Index, LhsScalar, LhsStorageOrder, ConjugateLhs, RhsScalar, RhsStorageOrder, ConjugateRhs, 0, UpLo, Version>::ResScalar*, Index, const ResScalar&, Eigen::internal::level3_blocking<LhsScalar, RhsScalar>&) [with Index = long int; LhsScalar = double; int LhsStorageOrder = 1; bool ConjugateLhs = false; RhsScalar = double; int RhsStorageOrder = 0; bool ConjugateRhs = false; int UpLo = 1; int Version = 0; Eigen::internal::general_matrix_matrix_triangular_product<Index, LhsScalar, LhsStorageOrder, ConjugateLhs, RhsScalar, RhsStorageOrder, ConjugateRhs, 0, UpLo, Version>::ResScalar = double]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/SelfadjointProduct.h:113:12: required from ‘static void Eigen::selfadjoint_product_selector<MatrixType, OtherType, UpLo, false>::run(MatrixType&, const OtherType&, const typename MatrixType::Scalar&) [with MatrixType = Eigen::Matrix<double, -1, -1>; OtherType = Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >; int UpLo = 1; typename MatrixType::Scalar = double]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/SelfadjointProduct.h:126:62: required from ‘Eigen::SelfAdjointView<MatrixType, UpLo>& Eigen::SelfAdjointView<MatrixType, Mode>::rankUpdate(const Eigen::MatrixBase<OtherDerived>&, const Scalar&) [with DerivedU = Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >; _MatrixType = Eigen::Matrix<double, -1, -1>; unsigned int UpLo = 1; Eigen::SelfAdjointView<MatrixType, Mode>::Scalar = double]’
ScanBMA_full.cpp:56:98: required from here
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
In file included from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/Core:440:0,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from ScanBMA_full.cpp:6:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true> >’:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:960:8: required from ‘struct Eigen::internal::evaluator<Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, -1, 1, false> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8: required from ‘struct Eigen::internal::evaluator<const Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, -1, 1, false> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:522:55: required from ‘struct Eigen::internal::unary_evaluator<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs_op<double>, const Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, -1, 1, false> >, Eigen::internal::IndexBased, double>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8: required from ‘struct Eigen::internal::evaluator<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs_op<double>, const Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, -1, 1, false> > >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:349:39: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:453:73: required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::sum() const [with Derived = Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs_op<double>, const Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, -1, 1, false> >; typename Eigen::internal::traits<T>::Scalar = double]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:221:29: required from ‘static typename Eigen::NumTraits<typename Eigen::internal::traits<T>::Scalar>::Real Eigen::internal::lpNorm_selector<Derived, 1>::run(const Eigen::MatrixBase<Derived>&) [with Derived = Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, -1, 1, false>; typename Eigen::NumTraits<typename Eigen::internal::traits<T>::Scalar>::Real = double]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:269:52: required from ‘typename Eigen::NumTraits<typename Eigen::internal::traits<T>::Scalar>::Real Eigen::MatrixBase<Derived>::lpNorm() const [with int p = 1; Derived = Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, -1, 1, false>; typename Eigen::NumTraits<typename Eigen::internal::traits<T>::Scalar>::Real = double]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:441:77: required from ‘Eigen::LLT<MatrixType, _UpLo>& Eigen::LLT<MatrixType, UpLo>::compute(const Eigen::EigenBase<OtherDerived>&) [with InputType = Eigen::SelfAdjointView<Eigen::Matrix<double, -1, -1>, 1>; _MatrixType = Eigen::Matrix<double, -1, -1>; int _UpLo = 1]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:115:14: required from ‘Eigen::LLT<MatrixType, UpLo>::LLT(Eigen::EigenBase<OtherDerived>&) [with InputType = Eigen::SelfAdjointView<Eigen::Matrix<double, -1, -1>, 1>; _MatrixType = Eigen::Matrix<double, -1, -1>; int _UpLo = 1]’
ScanBMA_full.cpp:56:99: required from here
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:960:8: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
enum {
^
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator<Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, -1, 1, false> >’:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8: required from ‘struct Eigen::internal::evaluator<const Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, -1, 1, false> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:522:55: required from ‘struct Eigen::internal::unary_evaluator<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs_op<double>, const Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, -1, 1, false> >, Eigen::internal::IndexBased, double>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8: required from ‘struct Eigen::internal::evaluator<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs_op<double>, const Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, -1, 1, false> > >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:349:39: required from ‘class Eigen::internal::redux_evaluator<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs_op<double>, const Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, -1, 1, false> > >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:416:17: required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op<double, double>; Derived = Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs_op<double>, const Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, -1, 1, false> >; typename Eigen::internal::traits<T>::Scalar = double]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:453:73: required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::sum() const [with Derived = Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs_op<double>, const Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, -1, 1, false> >; typename Eigen::internal::traits<T>::Scalar = double]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:221:29: required from ‘static typename Eigen::NumTraits<typename Eigen::internal::traits<T>::Scalar>::Real Eigen::internal::lpNorm_selector<Derived, 1>::run(const Eigen::MatrixBase<Derived>&) [with Derived = Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, -1, 1, false>; typename Eigen::NumTraits<typename Eigen::internal::traits<T>::Scalar>::Real = double]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:269:52: required from ‘typename Eigen::NumTraits<typename Eigen::internal::traits<T>::Scalar>::Real Eigen::MatrixBase<Derived>::lpNorm() const [with int p = 1; Derived = Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, -1, 1, false>; typename Eigen::NumTraits<typename Eigen::internal::traits<T>::Scalar>::Real = double]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:441:77: required from ‘Eigen::LLT<MatrixType, _UpLo>& Eigen::LLT<MatrixType, UpLo>::compute(const Eigen::EigenBase<OtherDerived>&) [with InputType = Eigen::SelfAdjointView<Eigen::Matrix<double, -1, -1>, 1>; _MatrixType = Eigen::Matrix<double, -1, -1>; int _UpLo = 1]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:115:14: required from ‘Eigen::LLT<MatrixType, UpLo>::LLT(Eigen::EigenBase<OtherDerived>&) [with InputType = Eigen::SelfAdjointView<Eigen::Matrix<double, -1, -1>, 1>; _MatrixType = Eigen::Matrix<double, -1, -1>; int _UpLo = 1]’
ScanBMA_full.cpp:56:99: required from here
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:960:8: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false> >’:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:960:8: required from ‘struct Eigen::internal::evaluator<Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, 1, -1, false> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8: required from ‘struct Eigen::internal::evaluator<const Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, 1, -1, false> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:522:55: required from ‘struct Eigen::internal::unary_evaluator<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs_op<double>, const Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, 1, -1, false> >, Eigen::internal::IndexBased, double>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8: required from ‘struct Eigen::internal::evaluator<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs_op<double>, const Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, 1, -1, false> > >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:349:39: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:453:73: required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::sum() const [with Derived = Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs_op<double>, const Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, 1, -1, false> >; typename Eigen::internal::traits<T>::Scalar = double]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:221:29: required from ‘static typename Eigen::NumTraits<typename Eigen::internal::traits<T>::Scalar>::Real Eigen::internal::lpNorm_selector<Derived, 1>::run(const Eigen::MatrixBase<Derived>&) [with Derived = Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, 1, -1, false>; typename Eigen::NumTraits<typename Eigen::internal::traits<T>::Scalar>::Real = double]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:269:52: required from ‘typename Eigen::NumTraits<typename Eigen::internal::traits<T>::Scalar>::Real Eigen::MatrixBase<Derived>::lpNorm() const [with int p = 1; Derived = Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, 1, -1, false>; typename Eigen::NumTraits<typename Eigen::internal::traits<T>::Scalar>::Real = double]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:441:77: required from ‘Eigen::LLT<MatrixType, _UpLo>& Eigen::LLT<MatrixType, UpLo>::compute(const Eigen::EigenBase<OtherDerived>&) [with InputType = Eigen::SelfAdjointView<Eigen::Matrix<double, -1, -1>, 1>; _MatrixType = Eigen::Matrix<double, -1, -1>; int _UpLo = 1]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:115:14: required from ‘Eigen::LLT<MatrixType, UpLo>::LLT(Eigen::EigenBase<OtherDerived>&) [with InputType = Eigen::SelfAdjointView<Eigen::Matrix<double, -1, -1>, 1>; _MatrixType = Eigen::Matrix<double, -1, -1>; int _UpLo = 1]’
ScanBMA_full.cpp:56:99: required from here
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:960:8: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator<Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, 1, -1, false> >’:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8: required from ‘struct Eigen::internal::evaluator<const Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, 1, -1, false> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:522:55: required from ‘struct Eigen::internal::unary_evaluator<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs_op<double>, const Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, 1, -1, false> >, Eigen::internal::IndexBased, double>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8: required from ‘struct Eigen::internal::evaluator<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs_op<double>, const Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, 1, -1, false> > >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:349:39: required from ‘class Eigen::internal::redux_evaluator<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs_op<double>, const Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, 1, -1, false> > >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:416:17: required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op<double, double>; Derived = Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs_op<double>, const Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, 1, -1, false> >; typename Eigen::internal::traits<T>::Scalar = double]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:453:73: required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::sum() const [with Derived = Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs_op<double>, const Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, 1, -1, false> >; typename Eigen::internal::traits<T>::Scalar = double]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:221:29: required from ‘static typename Eigen::NumTraits<typename Eigen::internal::traits<T>::Scalar>::Real Eigen::internal::lpNorm_selector<Derived, 1>::run(const Eigen::MatrixBase<Derived>&) [with Derived = Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, 1, -1, false>; typename Eigen::NumTraits<typename Eigen::internal::traits<T>::Scalar>::Real = double]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:269:52: required from ‘typename Eigen::NumTraits<typename Eigen::internal::traits<T>::Scalar>::Real Eigen::MatrixBase<Derived>::lpNorm() const [with int p = 1; Derived = Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, 1, -1, false>; typename Eigen::NumTraits<typename Eigen::internal::traits<T>::Scalar>::Real = double]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:441:77: required from ‘Eigen::LLT<MatrixType, _UpLo>& Eigen::LLT<MatrixType, UpLo>::compute(const Eigen::EigenBase<OtherDerived>&) [with InputType = Eigen::SelfAdjointView<Eigen::Matrix<double, -1, -1>, 1>; _MatrixType = Eigen::Matrix<double, -1, -1>; int _UpLo = 1]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:115:14: required from ‘Eigen::LLT<MatrixType, UpLo>::LLT(Eigen::EigenBase<OtherDerived>&) [with InputType = Eigen::SelfAdjointView<Eigen::Matrix<double, -1, -1>, 1>; _MatrixType = Eigen::Matrix<double, -1, -1>; int _UpLo = 1]’
ScanBMA_full.cpp:56:99: required from here
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:960:8: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
In file included from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/Core:434:0,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from ScanBMA_full.cpp:6:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false> >, 0>’:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false> > >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false> > >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from ‘class Eigen::CwiseUnaryOpImpl<Eigen::internal::scalar_abs2_op<double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>, Eigen::Dense>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from ‘class Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<double>, const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:98:43: required from ‘typename Eigen::NumTraits<typename Eigen::internal::traits<T>::Scalar>::Real Eigen::MatrixBase<Derived>::squaredNorm() const [with Derived = Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false>; typename Eigen::NumTraits<typename Eigen::internal::traits<T>::Scalar>::Real = double]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:321:18: required from ‘static Eigen::Index Eigen::internal::llt_inplace<Scalar, 1>::unblocked(MatrixType&) [with MatrixType = Eigen::Matrix<double, -1, -1>; Scalar = double; Eigen::Index = long int]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:337:23: required from ‘static Eigen::Index Eigen::internal::llt_inplace<Scalar, 1>::blocked(MatrixType&) [with MatrixType = Eigen::Matrix<double, -1, -1>; Scalar = double; Eigen::Index = long int]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:401:68: required from ‘static bool Eigen::internal::LLT_Traits<MatrixType, 1>::inplace_decomposition(MatrixType&) [with MatrixType = Eigen::Matrix<double, -1, -1>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:449:42: required from ‘Eigen::LLT<MatrixType, _UpLo>& Eigen::LLT<MatrixType, UpLo>::compute(const Eigen::EigenBase<OtherDerived>&) [with InputType = Eigen::SelfAdjointView<Eigen::Matrix<double, -1, -1>, 1>; _MatrixType = Eigen::Matrix<double, -1, -1>; int _UpLo = 1]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:115:14: required from ‘Eigen::LLT<MatrixType, UpLo>::LLT(Eigen::EigenBase<OtherDerived>&) [with InputType = Eigen::SelfAdjointView<Eigen::Matrix<double, -1, -1>, 1>; _MatrixType = Eigen::Matrix<double, -1, -1>; int _UpLo = 1]’
ScanBMA_full.cpp:56:99: required from here
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
>::type PacketReturnType;
^~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, -1, 1> >, 0>’:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, -1, 1> > >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, -1, 1> > >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from ‘class Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, -1, 1> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/SelfCwiseBinaryOp.h:41:67: required from ‘Derived& Eigen::DenseBase<Derived>::operator/=(const Scalar&) [with Derived = Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, false>; Eigen::DenseBase<Derived>::Scalar = double]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:326:21: required from ‘static Eigen::Index Eigen::internal::llt_inplace<Scalar, 1>::unblocked(MatrixType&) [with MatrixType = Eigen::Matrix<double, -1, -1>; Scalar = double; Eigen::Index = long int]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:337:23: required from ‘static Eigen::Index Eigen::internal::llt_inplace<Scalar, 1>::blocked(MatrixType&) [with MatrixType = Eigen::Matrix<double, -1, -1>; Scalar = double; Eigen::Index = long int]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:401:68: required from ‘static bool Eigen::internal::LLT_Traits<MatrixType, 1>::inplace_decomposition(MatrixType&) [with MatrixType = Eigen::Matrix<double, -1, -1>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:449:42: required from ‘Eigen::LLT<MatrixType, _UpLo>& Eigen::LLT<MatrixType, UpLo>::compute(const Eigen::EigenBase<OtherDerived>&) [with InputType = Eigen::SelfAdjointView<Eigen::Matrix<double, -1, -1>, 1>; _MatrixType = Eigen::Matrix<double, -1, -1>; int _UpLo = 1]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:115:14: required from ‘Eigen::LLT<MatrixType, UpLo>::LLT(Eigen::EigenBase<OtherDerived>&) [with InputType = Eigen::SelfAdjointView<Eigen::Matrix<double, -1, -1>, 1>; _MatrixType = Eigen::Matrix<double, -1, -1>; int _UpLo = 1]’
ScanBMA_full.cpp:56:99: required from here
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<double>, const Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>, 1, -1, false> >, 0>’:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<double>, const Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>, 1, -1, false> > >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<double>, const Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>, 1, -1, false> > >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from ‘class Eigen::CwiseUnaryOpImpl<Eigen::internal::scalar_abs2_op<double>, const Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>, 1, -1, false>, Eigen::Dense>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from ‘class Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<double>, const Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>, 1, -1, false> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:98:43: required from ‘typename Eigen::NumTraits<typename Eigen::internal::traits<T>::Scalar>::Real Eigen::MatrixBase<Derived>::squaredNorm() const [with Derived = Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>, 1, -1, false>; typename Eigen::NumTraits<typename Eigen::internal::traits<T>::Scalar>::Real = double]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:321:18: required from ‘static Eigen::Index Eigen::internal::llt_inplace<Scalar, 1>::unblocked(MatrixType&) [with MatrixType = Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>; Scalar = double; Eigen::Index = long int]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:356:24: required from ‘static Eigen::Index Eigen::internal::llt_inplace<Scalar, 1>::blocked(MatrixType&) [with MatrixType = Eigen::Matrix<double, -1, -1>; Scalar = double; Eigen::Index = long int]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:401:68: required from ‘static bool Eigen::internal::LLT_Traits<MatrixType, 1>::inplace_decomposition(MatrixType&) [with MatrixType = Eigen::Matrix<double, -1, -1>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:449:42: required from ‘Eigen::LLT<MatrixType, _UpLo>& Eigen::LLT<MatrixType, UpLo>::compute(const Eigen::EigenBase<OtherDerived>&) [with InputType = Eigen::SelfAdjointView<Eigen::Matrix<double, -1, -1>, 1>; _MatrixType = Eigen::Matrix<double, -1, -1>; int _UpLo = 1]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:115:14: required from ‘Eigen::LLT<MatrixType, UpLo>::LLT(Eigen::EigenBase<OtherDerived>&) [with InputType = Eigen::SelfAdjointView<Eigen::Matrix<double, -1, -1>, 1>; _MatrixType = Eigen::Matrix<double, -1, -1>; int _UpLo = 1]’
ScanBMA_full.cpp:56:99: required from here
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase<Derived>&) [with Derived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_conj_product_op<double, double>, const Eigen::Matrix<double, -1, 1>, const Eigen::Matrix<double, -1, 1> >; Eigen::Index = long int]’:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:225:63: required from ‘static Eigen::internal::redux_impl<Func, Derived, 3, 0>::Scalar Eigen::internal::redux_impl<Func, Derived, 3, 0>::run(const Derived&, const Func&) [with Func = Eigen::internal::scalar_sum_op<double, double>; Derived = Eigen::internal::redux_evaluator<Eigen::CwiseBinaryOp<Eigen::internal::scalar_conj_product_op<double, double>, const Eigen::Matrix<double, -1, 1>, const Eigen::Matrix<double, -1, 1> > >; Eigen::internal::redux_impl<Func, Derived, 3, 0>::Scalar = double]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op<double, double>; Derived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_conj_product_op<double, double>, const Eigen::Matrix<double, -1, 1>, const Eigen::Matrix<double, -1, 1> >; typename Eigen::internal::traits<T>::Scalar = double]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:453:73: required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::sum() const [with Derived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_conj_product_op<double, double>, const Eigen::Matrix<double, -1, 1>, const Eigen::Matrix<double, -1, 1> >; typename Eigen::internal::traits<T>::Scalar = double]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:37:52: required from ‘static Eigen::internal::dot_nocheck<T, U, NeedToTranspose>::ResScalar Eigen::internal::dot_nocheck<T, U, NeedToTranspose>::run(const Eigen::MatrixBase<Derived>&, const Eigen::MatrixBase<U>&) [with T = Eigen::Matrix<double, -1, 1>; U = Eigen::Matrix<double, -1, 1>; bool NeedToTranspose = false; Eigen::internal::dot_nocheck<T, U, NeedToTranspose>::ResScalar = double]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:84:58: required from ‘typename Eigen::ScalarBinaryOpTraits<typename Eigen::internal::traits<T>::Scalar, typename Eigen::internal::traits<OtherDerived>::Scalar>::ReturnType Eigen::MatrixBase<Derived>::dot(const Eigen::MatrixBase<OtherDerived>&) const [with OtherDerived = Eigen::Matrix<double, -1, 1>; Derived = Eigen::Matrix<double, -1, 1>; typename Eigen::ScalarBinaryOpTraits<typename Eigen::internal::traits<T>::Scalar, typename Eigen::internal::traits<OtherDerived>::Scalar>::ReturnType = double]’
ScanBMA_full.cpp:60:35: required from here
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:650:34: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
return internal::first_aligned<int(unpacket_traits<DefaultPacketType>::alignment),Derived>(m);
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 0>’:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >, 2>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> > >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Transpose<const Eigen::Matrix<double, -1, -1> > >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:115:37: required from ‘class Eigen::TransposeImpl<const Eigen::Matrix<double, -1, -1>, Eigen::Dense>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from ‘class Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/TriangularMatrix.h:174:44: [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Solve.h:147:5: required from ‘static void Eigen::internal::Assignment<DstXprType, Eigen::Solve<DecType, RhsType>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op<Scalar, Scalar>&) [with DstXprType = Eigen::Matrix<double, -1, 1>; DecType = Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>; RhsType = Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0>; Scalar = double; Eigen::internal::Assignment<DstXprType, Eigen::Solve<DecType, RhsType>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense>::SrcXprType = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, 1>; Src = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >; Func = Eigen::internal::assign_op<double, double>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >; Derived = Eigen::Matrix<double, -1, 1>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:816:7: required from ‘void Eigen::PlainObjectBase<Derived>::_init1(const Eigen::DenseBase<ElseDerived>&) [with T = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >; OtherDerived = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >; Derived = Eigen::Matrix<double, -1, 1>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:294:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’
ScanBMA_full.cpp:57:52: required from here
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
>::type PacketReturnType;
^~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase<Derived>&) [with Derived = Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs_op<double>, const Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, -1, 1, false> >; Eigen::Index = long int]’:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:225:63: required from ‘static Eigen::internal::redux_impl<Func, Derived, 3, 0>::Scalar Eigen::internal::redux_impl<Func, Derived, 3, 0>::run(const Derived&, const Func&) [with Func = Eigen::internal::scalar_sum_op<double, double>; Derived = Eigen::internal::redux_evaluator<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs_op<double>, const Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, -1, 1, false> > >; Eigen::internal::redux_impl<Func, Derived, 3, 0>::Scalar = double]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op<double, double>; Derived = Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs_op<double>, const Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, -1, 1, false> >; typename Eigen::internal::traits<T>::Scalar = double]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:453:73: required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::sum() const [with Derived = Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs_op<double>, const Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, -1, 1, false> >; typename Eigen::internal::traits<T>::Scalar = double]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:221:29: required from ‘static typename Eigen::NumTraits<typename Eigen::internal::traits<T>::Scalar>::Real Eigen::internal::lpNorm_selector<Derived, 1>::run(const Eigen::MatrixBase<Derived>&) [with Derived = Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, -1, 1, false>; typename Eigen::NumTraits<typename Eigen::internal::traits<T>::Scalar>::Real = double]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:269:52: required from ‘typename Eigen::NumTraits<typename Eigen::internal::traits<T>::Scalar>::Real Eigen::MatrixBase<Derived>::lpNorm() const [with int p = 1; Derived = Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, true>, -1, 1, false>; typename Eigen::NumTraits<typename Eigen::internal::traits<T>::Scalar>::Real = double]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:441:77: required from ‘Eigen::LLT<MatrixType, _UpLo>& Eigen::LLT<MatrixType, UpLo>::compute(const Eigen::EigenBase<OtherDerived>&) [with InputType = Eigen::SelfAdjointView<Eigen::Matrix<double, -1, -1>, 1>; _MatrixType = Eigen::Matrix<double, -1, -1>; int _UpLo = 1]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:115:14: required from ‘Eigen::LLT<MatrixType, UpLo>::LLT(Eigen::EigenBase<OtherDerived>&) [with InputType = Eigen::SelfAdjointView<Eigen::Matrix<double, -1, -1>, 1>; _MatrixType = Eigen::Matrix<double, -1, -1>; int _UpLo = 1]’
ScanBMA_full.cpp:56:99: required from here
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:650:34: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
return internal::first_aligned<int(unpacket_traits<DefaultPacketType>::alignment),Derived>(m);
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/Core:440:0,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from ScanBMA_full.cpp:6:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false> >’:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:352:102: required from ‘struct Eigen::internal::plain_object_eval<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>, Eigen::Dense>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:369:45: required from ‘struct Eigen::internal::generic_product_impl<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>, Eigen::Transpose<const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false> >, Eigen::DenseShape, Eigen::DenseShape, 7>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:178:42: required from ‘static void Eigen::internal::Assignment<DstXprType, Eigen::Product<Lhs, Rhs, Options>, Eigen::internal::sub_assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == DefaultProduct) || (Options == AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::sub_assign_op<Scalar, Scalar>&) [with DstXprType = Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, false>; Lhs = Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>; Rhs = Eigen::Transpose<const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false> >; int Options = 0; Scalar = double; Eigen::internal::Assignment<DstXprType, Eigen::Product<Lhs, Rhs, Options>, Eigen::internal::sub_assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == DefaultProduct) || (Options == AliasFreeProduct))>::type>::SrcXprType = Eigen::Product<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>, Eigen::Transpose<const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false> >, 0>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, false>; Src = Eigen::Product<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>, Eigen::Transpose<const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false> >, 0>; Func = Eigen::internal::sub_assign_op<double, double>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/NoAlias.h:58:31: required from ‘ExpressionType& Eigen::NoAlias<ExpressionType, StorageBase>::operator-=(const StorageBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>, Eigen::Transpose<const Eigen::Block<Eigen::Matrix<double, -1, -1>, 1, -1, false> >, 0>; ExpressionType = Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, false>; StorageBase = Eigen::MatrixBase]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:325:38: required from ‘static Eigen::Index Eigen::internal::llt_inplace<Scalar, 1>::unblocked(MatrixType&) [with MatrixType = Eigen::Matrix<double, -1, -1>; Scalar = double; Eigen::Index = long int]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:337:23: required from ‘static Eigen::Index Eigen::internal::llt_inplace<Scalar, 1>::blocked(MatrixType&) [with MatrixType = Eigen::Matrix<double, -1, -1>; Scalar = double; Eigen::Index = long int]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:401:68: required from ‘static bool Eigen::internal::LLT_Traits<MatrixType, 1>::inplace_decomposition(MatrixType&) [with MatrixType = Eigen::Matrix<double, -1, -1>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:449:42: required from ‘Eigen::LLT<MatrixType, _UpLo>& Eigen::LLT<MatrixType, UpLo>::compute(const Eigen::EigenBase<OtherDerived>&) [with InputType = Eigen::SelfAdjointView<Eigen::Matrix<double, -1, -1>, 1>; _MatrixType = Eigen::Matrix<double, -1, -1>; int _UpLo = 1]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:115:14: required from ‘Eigen::LLT<MatrixType, UpLo>::LLT(Eigen::EigenBase<OtherDerived>&) [with InputType = Eigen::SelfAdjointView<Eigen::Matrix<double, -1, -1>, 1>; _MatrixType = Eigen::Matrix<double, -1, -1>; int _UpLo = 1]’
ScanBMA_full.cpp:56:99: required from here
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:960:8: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
enum {
^
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator<Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>, 1, -1, false> >’:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8: required from ‘struct Eigen::internal::evaluator<const Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>, 1, -1, false> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:522:55: required from ‘struct Eigen::internal::unary_evaluator<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<double>, const Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>, 1, -1, false> >, Eigen::internal::IndexBased, double>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8: required from ‘struct Eigen::internal::evaluator<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<double>, const Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>, 1, -1, false> > >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:349:39: required from ‘class Eigen::internal::redux_evaluator<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<double>, const Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>, 1, -1, false> > >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:416:17: required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op<double, double>; Derived = Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<double>, const Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>, 1, -1, false> >; typename Eigen::internal::traits<T>::Scalar = double]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:453:73: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:321:18: required from ‘static Eigen::Index Eigen::internal::llt_inplace<Scalar, 1>::unblocked(MatrixType&) [with MatrixType = Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>; Scalar = double; Eigen::Index = long int]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:356:24: required from ‘static Eigen::Index Eigen::internal::llt_inplace<Scalar, 1>::blocked(MatrixType&) [with MatrixType = Eigen::Matrix<double, -1, -1>; Scalar = double; Eigen::Index = long int]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:401:68: required from ‘static bool Eigen::internal::LLT_Traits<MatrixType, 1>::inplace_decomposition(MatrixType&) [with MatrixType = Eigen::Matrix<double, -1, -1>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:449:42: required from ‘Eigen::LLT<MatrixType, _UpLo>& Eigen::LLT<MatrixType, UpLo>::compute(const Eigen::EigenBase<OtherDerived>&) [with InputType = Eigen::SelfAdjointView<Eigen::Matrix<double, -1, -1>, 1>; _MatrixType = Eigen::Matrix<double, -1, -1>; int _UpLo = 1]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:115:14: required from ‘Eigen::LLT<MatrixType, UpLo>::LLT(Eigen::EigenBase<OtherDerived>&) [with InputType = Eigen::SelfAdjointView<Eigen::Matrix<double, -1, -1>, 1>; _MatrixType = Eigen::Matrix<double, -1, -1>; int _UpLo = 1]’
ScanBMA_full.cpp:56:99: required from here
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:960:8: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator<Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>, -1, -1, false> >’:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:352:102: required from ‘struct Eigen::internal::plain_object_eval<Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>, -1, -1, false>, Eigen::Dense>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:369:45: required from ‘struct Eigen::internal::generic_product_impl<Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>, -1, -1, false>, Eigen::Transpose<const Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>, 1, -1, false> >, Eigen::DenseShape, Eigen::DenseShape, 7>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:178:42: required from ‘static void Eigen::internal::Assignment<DstXprType, Eigen::Product<Lhs, Rhs, Options>, Eigen::internal::sub_assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == DefaultProduct) || (Options == AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::sub_assign_op<Scalar, Scalar>&) [with DstXprType = Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>, -1, 1, false>; Lhs = Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>, -1, -1, false>; Rhs = Eigen::Transpose<const Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>, 1, -1, false> >; int Options = 0; Scalar = double; Eigen::internal::Assignment<DstXprType, Eigen::Product<Lhs, Rhs, Options>, Eigen::internal::sub_assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == DefaultProduct) || (Options == AliasFreeProduct))>::type>::SrcXprType = Eigen::Product<Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>, -1, -1, false>, Eigen::Transpose<const Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>, 1, -1, false> >, 0>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>, -1, 1, false>; Src = Eigen::Product<Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>, -1, -1, false>, Eigen::Transpose<const Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>, 1, -1, false> >, 0>; Func = Eigen::internal::sub_assign_op<double, double>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/NoAlias.h:58:31: required from ‘ExpressionType& Eigen::NoAlias<ExpressionType, StorageBase>::operator-=(const StorageBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>, -1, -1, false>, Eigen::Transpose<const Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>, 1, -1, false> >, 0>; ExpressionType = Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>, -1, 1, false>; StorageBase = Eigen::MatrixBase]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:325:38: required from ‘static Eigen::Index Eigen::internal::llt_inplace<Scalar, 1>::unblocked(MatrixType&) [with MatrixType = Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>; Scalar = double; Eigen::Index = long int]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:356:24: required from ‘static Eigen::Index Eigen::internal::llt_inplace<Scalar, 1>::blocked(MatrixType&) [with MatrixType = Eigen::Matrix<double, -1, -1>; Scalar = double; Eigen::Index = long int]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:401:68: required from ‘static bool Eigen::internal::LLT_Traits<MatrixType, 1>::inplace_decomposition(MatrixType&) [with MatrixType = Eigen::Matrix<double, -1, -1>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:449:42: required from ‘Eigen::LLT<MatrixType, _UpLo>& Eigen::LLT<MatrixType, UpLo>::compute(const Eigen::EigenBase<OtherDerived>&) [with InputType = Eigen::SelfAdjointView<Eigen::Matrix<double, -1, -1>, 1>; _MatrixType = Eigen::Matrix<double, -1, -1>; int _UpLo = 1]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:115:14: required from ‘Eigen::LLT<MatrixType, UpLo>::LLT(Eigen::EigenBase<OtherDerived>&) [with InputType = Eigen::SelfAdjointView<Eigen::Matrix<double, -1, -1>, 1>; _MatrixType = Eigen::Matrix<double, -1, -1>; int _UpLo = 1]’
ScanBMA_full.cpp:56:99: required from here
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:960:8: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
In file included from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/Core:494:0,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from ScanBMA_full.cpp:6:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h: In instantiation of ‘struct Eigen::internal::general_matrix_vector_product<long int, double, Eigen::internal::const_blas_data_mapper<double, long int, 0>, 0, false, double, Eigen::internal::const_blas_data_mapper<double, long int, 1>, false, 0>’:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/GeneralProduct.h:244:134: required from ‘static void Eigen::internal::gemv_dense_selector<2, 0, true>::run(const Lhs&, const Rhs&, Dest&, const typename Dest::Scalar&) [with Lhs = Eigen::Map<Eigen::Matrix<double, -1, -1> >; Rhs = Eigen::Matrix<double, -1, 1>; Dest = Eigen::Matrix<double, -1, 1>; typename Dest::Scalar = double]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:383:34: required from ‘static void Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::DenseShape, Eigen::DenseShape, 7>::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Matrix<double, -1, 1>; Lhs = Eigen::Map<Eigen::Matrix<double, -1, -1> >; Rhs = Eigen::Matrix<double, -1, 1>; Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::DenseShape, Eigen::DenseShape, 7>::Scalar = double]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:361:27: required from ‘static void Eigen::internal::generic_product_impl_base<Lhs, Rhs, Derived>::scaleAndAddTo(Dst&, const Lhs&, const Rhs&, const Scalar&) [with Dst = Eigen::Matrix<double, -1, 1>; Lhs = Eigen::Map<Eigen::Matrix<double, -1, -1> >; Rhs = Eigen::Matrix<double, -1, 1>; Derived = Eigen::internal::generic_product_impl<Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, 1>, Eigen::DenseShape, Eigen::DenseShape, 7>; Eigen::internal::generic_product_impl_base<Lhs, Rhs, Derived>::Scalar = double]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:349:33: required from ‘static void Eigen::internal::generic_product_impl_base<Lhs, Rhs, Derived>::evalTo(Dst&, const Lhs&, const Rhs&) [with Dst = Eigen::Matrix<double, -1, 1>; Lhs = Eigen::Map<Eigen::Matrix<double, -1, -1> >; Rhs = Eigen::Matrix<double, -1, 1>; Derived = Eigen::internal::generic_product_impl<Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, 1>, Eigen::DenseShape, Eigen::DenseShape, 7>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: required from ‘static void Eigen::internal::Assignment<DstXprType, Eigen::Product<Lhs, Rhs, Options>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == DefaultProduct) || (Options == AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op<Scalar, Scalar>&) [with DstXprType = Eigen::Matrix<double, -1, 1>; Lhs = Eigen::Map<Eigen::Matrix<double, -1, -1> >; Rhs = Eigen::Matrix<double, -1, 1>; int Options = 0; Scalar = double; Eigen::internal::Assignment<DstXprType, Eigen::Product<Lhs, Rhs, Options>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == DefaultProduct) || (Options == AliasFreeProduct))>::type>::SrcXprType = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, 1>, 0>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, 1>; Src = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, 1>, 0>; Func = Eigen::internal::assign_op<double, double>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, 1>, 0>; Derived = Eigen::Matrix<double, -1, 1>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:816:7: required from ‘void Eigen::PlainObjectBase<Derived>::_init1(const Eigen::DenseBase<ElseDerived>&) [with T = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, 1>, 0>; OtherDerived = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, 1>, 0>; Derived = Eigen::Matrix<double, -1, 1>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:294:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, 1>, 0>; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’
ScanBMA_full.cpp:58:36: required from here
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:75:71: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
typedef typename conditional<Vectorizable,_LhsPacket,LhsScalar>::type LhsPacket;
^~~~~~~~~
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:76:71: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
typedef typename conditional<Vectorizable,_RhsPacket,RhsScalar>::type RhsPacket;
^~~~~~~~~
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:77:71: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
typedef typename conditional<Vectorizable,_ResPacket,ResScalar>::type ResPacket;
^~~~~~~~~
In file included from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/Core:434:0,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from ScanBMA_full.cpp:6:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Map<Eigen::Matrix<double, -1, 1>, 2, Eigen::Stride<0, 0> >, 0>’:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Map<Eigen::Matrix<double, -1, 1>, 2, Eigen::Stride<0, 0> >, 1>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Map<Eigen::Matrix<double, -1, 1>, 2, Eigen::Stride<0, 0> >, 3>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Map<Eigen::Matrix<double, -1, 1>, 2, Eigen::Stride<0, 0> > >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Map<Eigen::Matrix<double, -1, 1>, 2, Eigen::Stride<0, 0> > >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Map<Eigen::Matrix<double, -1, 1>, 2, Eigen::Stride<0, 0> >, 0>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:219:34: [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: required from ‘static void Eigen::internal::Assignment<DstXprType, Eigen::Product<Lhs, Rhs, Options>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == DefaultProduct) || (Options == AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op<Scalar, Scalar>&) [with DstXprType = Eigen::Matrix<double, -1, 1>; Lhs = Eigen::Map<Eigen::Matrix<double, -1, -1> >; Rhs = Eigen::Matrix<double, -1, 1>; int Options = 0; Scalar = double; Eigen::internal::Assignment<DstXprType, Eigen::Product<Lhs, Rhs, Options>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == DefaultProduct) || (Options == AliasFreeProduct))>::type>::SrcXprType = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, 1>, 0>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, 1>; Src = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, 1>, 0>; Func = Eigen::internal::assign_op<double, double>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, 1>, 0>; Derived = Eigen::Matrix<double, -1, 1>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:816:7: required from ‘void Eigen::PlainObjectBase<Derived>::_init1(const Eigen::DenseBase<ElseDerived>&) [with T = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, 1>, 0>; OtherDerived = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, 1>, 0>; Derived = Eigen::Matrix<double, -1, 1>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:294:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, 1>, 0>; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’
ScanBMA_full.cpp:58:36: required from here
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
>::type PacketReturnType;
^~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, 1> >, 0>’:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, 1> > >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, 1> > >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from ‘class Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, 1> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:38:28: required from ‘struct Eigen::internal::traits<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, 1> >, const Eigen::Map<Eigen::Matrix<double, -1, 1>, 2, Eigen::Stride<0, 0> > > >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, 1> >, const Eigen::Map<Eigen::Matrix<double, -1, 1>, 2, Eigen::Stride<0, 0> >, Eigen::Dense>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: required from ‘static void Eigen::internal::Assignment<DstXprType, Eigen::Product<Lhs, Rhs, Options>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == DefaultProduct) || (Options == AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op<Scalar, Scalar>&) [with DstXprType = Eigen::Matrix<double, -1, 1>; Lhs = Eigen::Map<Eigen::Matrix<double, -1, -1> >; Rhs = Eigen::Matrix<double, -1, 1>; int Options = 0; Scalar = double; Eigen::internal::Assignment<DstXprType, Eigen::Product<Lhs, Rhs, Options>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == DefaultProduct) || (Options == AliasFreeProduct))>::type>::SrcXprType = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, 1>, 0>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, 1>; Src = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, 1>, 0>; Func = Eigen::internal::assign_op<double, double>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, 1>, 0>; Derived = Eigen::Matrix<double, -1, 1>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:816:7: required from ‘void Eigen::PlainObjectBase<Derived>::_init1(const Eigen::DenseBase<ElseDerived>&) [with T = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, 1>, 0>; OtherDerived = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, 1>, 0>; Derived = Eigen::Matrix<double, -1, 1>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:294:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, 1>, 0>; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’
ScanBMA_full.cpp:58:36: required from here
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, 1> >, const Eigen::Map<Eigen::Matrix<double, -1, 1>, 2, Eigen::Stride<0, 0> > >, 0>’:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, 1> >, const Eigen::Map<Eigen::Matrix<double, -1, 1>, 2, Eigen::Stride<0, 0> > > >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, 1> >, const Eigen::Map<Eigen::Matrix<double, -1, 1>, 2, Eigen::Stride<0, 0> > > >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, 1> >, const Eigen::Map<Eigen::Matrix<double, -1, 1>, 2, Eigen::Stride<0, 0> >, Eigen::Dense>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, 1> >, const Eigen::Map<Eigen::Matrix<double, -1, 1>, 2, Eigen::Stride<0, 0> > >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/GeneralProduct.h:287:40: required from ‘static void Eigen::internal::gemv_dense_selector<2, 0, true>::run(const Lhs&, const Rhs&, Dest&, const typename Dest::Scalar&) [with Lhs = Eigen::Map<Eigen::Matrix<double, -1, -1> >; Rhs = Eigen::Matrix<double, -1, 1>; Dest = Eigen::Matrix<double, -1, 1>; typename Dest::Scalar = double]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:383:34: [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: required from ‘static void Eigen::internal::Assignment<DstXprType, Eigen::Product<Lhs, Rhs, Options>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == DefaultProduct) || (Options == AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op<Scalar, Scalar>&) [with DstXprType = Eigen::Matrix<double, -1, 1>; Lhs = Eigen::Map<Eigen::Matrix<double, -1, -1> >; Rhs = Eigen::Matrix<double, -1, 1>; int Options = 0; Scalar = double; Eigen::internal::Assignment<DstXprType, Eigen::Product<Lhs, Rhs, Options>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == DefaultProduct) || (Options == AliasFreeProduct))>::type>::SrcXprType = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, 1>, 0>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, 1>; Src = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, 1>, 0>; Func = Eigen::internal::assign_op<double, double>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, 1>, 0>; Derived = Eigen::Matrix<double, -1, 1>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:816:7: required from ‘void Eigen::PlainObjectBase<Derived>::_init1(const Eigen::DenseBase<ElseDerived>&) [with T = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, 1>, 0>; OtherDerived = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, 1>, 0>; Derived = Eigen::Matrix<double, -1, 1>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:294:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, 1>, 0>; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’
ScanBMA_full.cpp:58:36: required from here
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
In file included from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/Core:440:0,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from ScanBMA_full.cpp:6:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, false> >’:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:736:20: required from ‘void Eigen::internal::call_dense_assignment_loop(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, false>; SrcXprType = Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, -1, 1> >; Functor = Eigen::internal::div_assign_op<double, double>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:879:31: required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, false>; SrcXprType = Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, -1, 1> >; Functor = Eigen::internal::div_assign_op<double, double>; Weak = void]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, false>; Src = Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, -1, 1> >; Func = Eigen::internal::div_assign_op<double, double>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:804:27: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename Eigen::internal::enable_if<(! Eigen::internal::evaluator_assume_aliasing<Src>::value), void*>::type) [with Dst = Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, false>; Src = Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, -1, 1> >; Func = Eigen::internal::div_assign_op<double, double>; typename Eigen::internal::enable_if<(! Eigen::internal::evaluator_assume_aliasing<Src>::value), void*>::type = void*]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/SelfCwiseBinaryOp.h:41:28: required from ‘Derived& Eigen::DenseBase<Derived>::operator/=(const Scalar&) [with Derived = Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, 1, false>; Eigen::DenseBase<Derived>::Scalar = double]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:326:21: required from ‘static Eigen::Index Eigen::internal::llt_inplace<Scalar, 1>::unblocked(MatrixType&) [with MatrixType = Eigen::Matrix<double, -1, -1>; Scalar = double; Eigen::Index = long int]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:337:23: required from ‘static Eigen::Index Eigen::internal::llt_inplace<Scalar, 1>::blocked(MatrixType&) [with MatrixType = Eigen::Matrix<double, -1, -1>; Scalar = double; Eigen::Index = long int]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:401:68: required from ‘static bool Eigen::internal::LLT_Traits<MatrixType, 1>::inplace_decomposition(MatrixType&) [with MatrixType = Eigen::Matrix<double, -1, -1>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:449:42: required from ‘Eigen::LLT<MatrixType, _UpLo>& Eigen::LLT<MatrixType, UpLo>::compute(const Eigen::EigenBase<OtherDerived>&) [with InputType = Eigen::SelfAdjointView<Eigen::Matrix<double, -1, -1>, 1>; _MatrixType = Eigen::Matrix<double, -1, -1>; int _UpLo = 1]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:115:14: required from ‘Eigen::LLT<MatrixType, UpLo>::LLT(Eigen::EigenBase<OtherDerived>&) [with InputType = Eigen::SelfAdjointView<Eigen::Matrix<double, -1, -1>, 1>; _MatrixType = Eigen::Matrix<double, -1, -1>; int _UpLo = 1]’
ScanBMA_full.cpp:56:99: required from here
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:960:8: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
enum {
^
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator<Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>, -1, 1, false> >’:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:736:20: required from ‘void Eigen::internal::call_dense_assignment_loop(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>, -1, 1, false>; SrcXprType = Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, -1, 1> >; Functor = Eigen::internal::div_assign_op<double, double>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:879:31: required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>, -1, 1, false>; SrcXprType = Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, -1, 1> >; Functor = Eigen::internal::div_assign_op<double, double>; Weak = void]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>, -1, 1, false>; Src = Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, -1, 1> >; Func = Eigen::internal::div_assign_op<double, double>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:804:27: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename Eigen::internal::enable_if<(! Eigen::internal::evaluator_assume_aliasing<Src>::value), void*>::type) [with Dst = Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>, -1, 1, false>; Src = Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, -1, 1> >; Func = Eigen::internal::div_assign_op<double, double>; typename Eigen::internal::enable_if<(! Eigen::internal::evaluator_assume_aliasing<Src>::value), void*>::type = void*]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/SelfCwiseBinaryOp.h:41:28: required from ‘Derived& Eigen::DenseBase<Derived>::operator/=(const Scalar&) [with Derived = Eigen::Block<Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>, -1, 1, false>; Eigen::DenseBase<Derived>::Scalar = double]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:326:21: required from ‘static Eigen::Index Eigen::internal::llt_inplace<Scalar, 1>::unblocked(MatrixType&) [with MatrixType = Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>; Scalar = double; Eigen::Index = long int]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:356:24: required from ‘static Eigen::Index Eigen::internal::llt_inplace<Scalar, 1>::blocked(MatrixType&) [with MatrixType = Eigen::Matrix<double, -1, -1>; Scalar = double; Eigen::Index = long int]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:401:68: required from ‘static bool Eigen::internal::LLT_Traits<MatrixType, 1>::inplace_decomposition(MatrixType&) [with MatrixType = Eigen::Matrix<double, -1, -1>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:449:42: required from ‘Eigen::LLT<MatrixType, _UpLo>& Eigen::LLT<MatrixType, UpLo>::compute(const Eigen::EigenBase<OtherDerived>&) [with InputType = Eigen::SelfAdjointView<Eigen::Matrix<double, -1, -1>, 1>; _MatrixType = Eigen::Matrix<double, -1, -1>; int _UpLo = 1]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:115:14: required from ‘Eigen::LLT<MatrixType, UpLo>::LLT(Eigen::EigenBase<OtherDerived>&) [with InputType = Eigen::SelfAdjointView<Eigen::Matrix<double, -1, -1>, 1>; _MatrixType = Eigen::Matrix<double, -1, -1>; int _UpLo = 1]’
ScanBMA_full.cpp:56:99: required from here
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:960:8: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
In file included from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/Core:434:0,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from ScanBMA_full.cpp:6:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Map<Eigen::Matrix<double, -1, 1>, 16, Eigen::Stride<0, 0> >, 0>’:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Map<Eigen::Matrix<double, -1, 1>, 16, Eigen::Stride<0, 0> >, 1>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Map<Eigen::Matrix<double, -1, 1>, 16, Eigen::Stride<0, 0> >, 3>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Map<Eigen::Matrix<double, -1, 1>, 16, Eigen::Stride<0, 0> > >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Map<Eigen::Matrix<double, -1, 1>, 16, Eigen::Stride<0, 0> > >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Map<Eigen::Matrix<double, -1, 1>, 16, Eigen::Stride<0, 0> >, 0>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:219:34: [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Solve.h:147:5: required from ‘static void Eigen::internal::Assignment<DstXprType, Eigen::Solve<DecType, RhsType>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op<Scalar, Scalar>&) [with DstXprType = Eigen::Matrix<double, -1, 1>; DecType = Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>; RhsType = Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0>; Scalar = double; Eigen::internal::Assignment<DstXprType, Eigen::Solve<DecType, RhsType>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense>::SrcXprType = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, 1>; Src = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >; Func = Eigen::internal::assign_op<double, double>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >; Derived = Eigen::Matrix<double, -1, 1>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:816:7: required from ‘void Eigen::PlainObjectBase<Derived>::_init1(const Eigen::DenseBase<ElseDerived>&) [with T = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >; OtherDerived = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >; Derived = Eigen::Matrix<double, -1, 1>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:294:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’
ScanBMA_full.cpp:57:52: required from here
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
>::type PacketReturnType;
^~~~~~~~~~~~~~~~
In file included from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/Core:494:0,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from ScanBMA_full.cpp:6:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h: In instantiation of ‘static void Eigen::internal::general_matrix_vector_product<Index, LhsScalar, LhsMapper, 0, ConjugateLhs, RhsScalar, RhsMapper, ConjugateRhs, Version>::run(Index, Index, const LhsMapper&, const RhsMapper&, Eigen::internal::general_matrix_vector_product<Index, LhsScalar, LhsMapper, 0, ConjugateLhs, RhsScalar, RhsMapper, ConjugateRhs, Version>::ResScalar*, Index, RhsScalar) [with Index = long int; LhsScalar = double; LhsMapper = Eigen::internal::const_blas_data_mapper<double, long int, 0>; bool ConjugateLhs = false; RhsScalar = double; RhsMapper = Eigen::internal::const_blas_data_mapper<double, long int, 1>; bool ConjugateRhs = false; int Version = 0; Eigen::internal::general_matrix_vector_product<Index, LhsScalar, LhsMapper, 0, ConjugateLhs, RhsScalar, RhsMapper, ConjugateRhs, Version>::ResScalar = double]’:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/GeneralProduct.h:244:134: required from ‘static void Eigen::internal::gemv_dense_selector<2, 0, true>::run(const Lhs&, const Rhs&, Dest&, const typename Dest::Scalar&) [with Lhs = Eigen::Map<Eigen::Matrix<double, -1, -1> >; Rhs = Eigen::Matrix<double, -1, 1>; Dest = Eigen::Matrix<double, -1, 1>; typename Dest::Scalar = double]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:383:34: required from ‘static void Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::DenseShape, Eigen::DenseShape, 7>::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Matrix<double, -1, 1>; Lhs = Eigen::Map<Eigen::Matrix<double, -1, -1> >; Rhs = Eigen::Matrix<double, -1, 1>; Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::DenseShape, Eigen::DenseShape, 7>::Scalar = double]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:361:27: required from ‘static void Eigen::internal::generic_product_impl_base<Lhs, Rhs, Derived>::scaleAndAddTo(Dst&, const Lhs&, const Rhs&, const Scalar&) [with Dst = Eigen::Matrix<double, -1, 1>; Lhs = Eigen::Map<Eigen::Matrix<double, -1, -1> >; Rhs = Eigen::Matrix<double, -1, 1>; Derived = Eigen::internal::generic_product_impl<Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, 1>, Eigen::DenseShape, Eigen::DenseShape, 7>; Eigen::internal::generic_product_impl_base<Lhs, Rhs, Derived>::Scalar = double]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:349:33: required from ‘static void Eigen::internal::generic_product_impl_base<Lhs, Rhs, Derived>::evalTo(Dst&, const Lhs&, const Rhs&) [with Dst = Eigen::Matrix<double, -1, 1>; Lhs = Eigen::Map<Eigen::Matrix<double, -1, -1> >; Rhs = Eigen::Matrix<double, -1, 1>; Derived = Eigen::internal::generic_product_impl<Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, 1>, Eigen::DenseShape, Eigen::DenseShape, 7>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: required from ‘static void Eigen::internal::Assignment<DstXprType, Eigen::Product<Lhs, Rhs, Options>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == DefaultProduct) || (Options == AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op<Scalar, Scalar>&) [with DstXprType = Eigen::Matrix<double, -1, 1>; Lhs = Eigen::Map<Eigen::Matrix<double, -1, -1> >; Rhs = Eigen::Matrix<double, -1, 1>; int Options = 0; Scalar = double; Eigen::internal::Assignment<DstXprType, Eigen::Product<Lhs, Rhs, Options>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == DefaultProduct) || (Options == AliasFreeProduct))>::type>::SrcXprType = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, 1>, 0>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, 1>; Src = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, 1>, 0>; Func = Eigen::internal::assign_op<double, double>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, 1>, 0>; Derived = Eigen::Matrix<double, -1, 1>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:816:7: required from ‘void Eigen::PlainObjectBase<Derived>::_init1(const Eigen::DenseBase<ElseDerived>&) [with T = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, 1>, 0>; OtherDerived = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, 1>, 0>; Derived = Eigen::Matrix<double, -1, 1>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:294:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, 1>, 0>; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’
ScanBMA_full.cpp:58:36: required from here
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:112:62: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
conj_helper<LhsPacket,RhsPacket,ConjugateLhs,ConjugateRhs> pcj;
^~~
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:112:62: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
In file included from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/Core:434:0,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from ScanBMA_full.cpp:6:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Map<const Eigen::Matrix<double, -1, -1>, 0, Eigen::OuterStride<> >, 0>’:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Map<const Eigen::Matrix<double, -1, -1>, 0, Eigen::OuterStride<> >, 2>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Map<const Eigen::Matrix<double, -1, -1>, 0, Eigen::OuterStride<> > >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Map<const Eigen::Matrix<double, -1, -1>, 0, Eigen::OuterStride<> > >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Map<const Eigen::Matrix<double, -1, -1>, 0, Eigen::OuterStride<> >, 0>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Map.h:94:79: required from ‘class Eigen::Map<const Eigen::Matrix<double, -1, -1>, 0, Eigen::OuterStride<> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/TriangularSolverVector.h:97:18: [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Solve.h:147:5: required from ‘static void Eigen::internal::Assignment<DstXprType, Eigen::Solve<DecType, RhsType>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op<Scalar, Scalar>&) [with DstXprType = Eigen::Matrix<double, -1, 1>; DecType = Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>; RhsType = Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0>; Scalar = double; Eigen::internal::Assignment<DstXprType, Eigen::Solve<DecType, RhsType>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense>::SrcXprType = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, 1>; Src = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >; Func = Eigen::internal::assign_op<double, double>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >; Derived = Eigen::Matrix<double, -1, 1>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:816:7: required from ‘void Eigen::PlainObjectBase<Derived>::_init1(const Eigen::DenseBase<ElseDerived>&) [with T = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >; OtherDerived = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >; Derived = Eigen::Matrix<double, -1, 1>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:294:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’
ScanBMA_full.cpp:57:52: required from here
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
>::type PacketReturnType;
^~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<const Eigen::Map<const Eigen::Matrix<double, -1, -1>, 0, Eigen::OuterStride<> >, -1, 1, true>, 0>’:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<const Eigen::Map<const Eigen::Matrix<double, -1, -1>, 0, Eigen::OuterStride<> >, -1, 1, true>, 2>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Block<const Eigen::Map<const Eigen::Matrix<double, -1, -1>, 0, Eigen::OuterStride<> >, -1, 1, true> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Block<const Eigen::Map<const Eigen::Matrix<double, -1, -1>, 0, Eigen::OuterStride<> >, -1, 1, true> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Block<const Eigen::Map<const Eigen::Matrix<double, -1, -1>, 0, Eigen::OuterStride<> >, -1, 1, true>, 0>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from ‘class Eigen::internal::BlockImpl_dense<const Eigen::Map<const Eigen::Matrix<double, -1, -1>, 0, Eigen::OuterStride<> >, -1, 1, true, true>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Solve.h:147:5: required from ‘static void Eigen::internal::Assignment<DstXprType, Eigen::Solve<DecType, RhsType>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op<Scalar, Scalar>&) [with DstXprType = Eigen::Matrix<double, -1, 1>; DecType = Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>; RhsType = Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0>; Scalar = double; Eigen::internal::Assignment<DstXprType, Eigen::Solve<DecType, RhsType>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense>::SrcXprType = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, 1>; Src = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >; Func = Eigen::internal::assign_op<double, double>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >; Derived = Eigen::Matrix<double, -1, 1>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:816:7: required from ‘void Eigen::PlainObjectBase<Derived>::_init1(const Eigen::DenseBase<ElseDerived>&) [with T = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >; OtherDerived = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >; Derived = Eigen::Matrix<double, -1, 1>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:294:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’
ScanBMA_full.cpp:57:52: required from here
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<const Eigen::Block<const Eigen::Map<const Eigen::Matrix<double, -1, -1>, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false>, 0>’:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<const Eigen::Block<const Eigen::Map<const Eigen::Matrix<double, -1, -1>, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false>, 2>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Block<const Eigen::Block<const Eigen::Map<const Eigen::Matrix<double, -1, -1>, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Block<const Eigen::Block<const Eigen::Map<const Eigen::Matrix<double, -1, -1>, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Block<const Eigen::Block<const Eigen::Map<const Eigen::Matrix<double, -1, -1>, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false>, 0>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from ‘class Eigen::internal::BlockImpl_dense<const Eigen::Block<const Eigen::Map<const Eigen::Matrix<double, -1, -1>, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false, true>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Solve.h:147:5: required from ‘static void Eigen::internal::Assignment<DstXprType, Eigen::Solve<DecType, RhsType>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op<Scalar, Scalar>&) [with DstXprType = Eigen::Matrix<double, -1, 1>; DecType = Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>; RhsType = Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0>; Scalar = double; Eigen::internal::Assignment<DstXprType, Eigen::Solve<DecType, RhsType>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense>::SrcXprType = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, 1>; Src = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >; Func = Eigen::internal::assign_op<double, double>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >; Derived = Eigen::Matrix<double, -1, 1>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:816:7: required from ‘void Eigen::PlainObjectBase<Derived>::_init1(const Eigen::DenseBase<ElseDerived>&) [with T = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >; OtherDerived = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >; Derived = Eigen::Matrix<double, -1, 1>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:294:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’
ScanBMA_full.cpp:57:52: required from here
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, 1> >, const Eigen::Block<const Eigen::Block<const Eigen::Map<const Eigen::Matrix<double, -1, -1>, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false> >, 0>’:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, 1> >, const Eigen::Block<const Eigen::Block<const Eigen::Map<const Eigen::Matrix<double, -1, -1>, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false> > >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, 1> >, const Eigen::Block<const Eigen::Block<const Eigen::Map<const Eigen::Matrix<double, -1, -1>, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false> > >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, 1> >, const Eigen::Block<const Eigen::Block<const Eigen::Map<const Eigen::Matrix<double, -1, -1>, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false>, Eigen::Dense>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, 1> >, const Eigen::Block<const Eigen::Block<const Eigen::Map<const Eigen::Matrix<double, -1, -1>, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/TriangularSolverVector.h:123:64: required from ‘static void Eigen::internal::triangular_solve_vector<LhsScalar, RhsScalar, Index, 1, Mode, Conjugate, 0>::run(Index, const LhsScalar*, Index, RhsScalar*) [with LhsScalar = double; RhsScalar = double; Index = long int; int Mode = 1; bool Conjugate = false]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/SolveTriangular.h:73:12: [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Solve.h:147:5: required from ‘static void Eigen::internal::Assignment<DstXprType, Eigen::Solve<DecType, RhsType>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op<Scalar, Scalar>&) [with DstXprType = Eigen::Matrix<double, -1, 1>; DecType = Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>; RhsType = Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0>; Scalar = double; Eigen::internal::Assignment<DstXprType, Eigen::Solve<DecType, RhsType>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense>::SrcXprType = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, 1>; Src = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >; Func = Eigen::internal::assign_op<double, double>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >; Derived = Eigen::Matrix<double, -1, 1>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:816:7: required from ‘void Eigen::PlainObjectBase<Derived>::_init1(const Eigen::DenseBase<ElseDerived>&) [with T = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >; OtherDerived = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >; Derived = Eigen::Matrix<double, -1, 1>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:294:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’
ScanBMA_full.cpp:57:52: required from here
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
In file included from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/Core:494:0,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from ScanBMA_full.cpp:6:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h: In instantiation of ‘struct Eigen::internal::general_matrix_vector_product<long int, double, Eigen::internal::const_blas_data_mapper<double, long int, 0>, 0, false, double, Eigen::internal::const_blas_data_mapper<double, long int, 0>, false, 0>’:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/TriangularSolverVector.h:131:115: required from ‘static void Eigen::internal::triangular_solve_vector<LhsScalar, RhsScalar, Index, 1, Mode, Conjugate, 0>::run(Index, const LhsScalar*, Index, RhsScalar*) [with LhsScalar = double; RhsScalar = double; Index = long int; int Mode = 1; bool Conjugate = false]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/SolveTriangular.h:73:12: required from ‘static void Eigen::internal::triangular_solver_selector<Lhs, Rhs, Side, Mode, 0, 1>::run(const Lhs&, Rhs&) [with Lhs = const Eigen::Matrix<double, -1, -1>; Rhs = Eigen::Matrix<double, -1, 1>; int Side = 1; int Mode = 1]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/SolveTriangular.h:182:21: required from ‘void Eigen::TriangularViewImpl<_MatrixType, _Mode, Eigen::Dense>::solveInPlace(const Eigen::MatrixBase<OtherDerived>&) const [with int Side = 1; OtherDerived = Eigen::Matrix<double, -1, 1>; _MatrixType = const Eigen::Matrix<double, -1, -1>; unsigned int _Mode = 1]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/TriangularMatrix.h:511:37: required from ‘void Eigen::TriangularViewImpl<_MatrixType, _Mode, Eigen::Dense>::solveInPlace(const Eigen::MatrixBase<OtherDerived>&) const [with OtherDerived = Eigen::Matrix<double, -1, 1>; _MatrixType = const Eigen::Matrix<double, -1, -1>; unsigned int _Mode = 1]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:504:3: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Solve.h:147:5: required from ‘static void Eigen::internal::Assignment<DstXprType, Eigen::Solve<DecType, RhsType>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op<Scalar, Scalar>&) [with DstXprType = Eigen::Matrix<double, -1, 1>; DecType = Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>; RhsType = Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0>; Scalar = double; Eigen::internal::Assignment<DstXprType, Eigen::Solve<DecType, RhsType>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense>::SrcXprType = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, 1>; Src = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >; Func = Eigen::internal::assign_op<double, double>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >; Derived = Eigen::Matrix<double, -1, 1>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:816:7: required from ‘void Eigen::PlainObjectBase<Derived>::_init1(const Eigen::DenseBase<ElseDerived>&) [with T = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >; OtherDerived = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >; Derived = Eigen::Matrix<double, -1, 1>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:294:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’
ScanBMA_full.cpp:57:52: required from here
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:75:71: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
typedef typename conditional<Vectorizable,_LhsPacket,LhsScalar>::type LhsPacket;
^~~~~~~~~
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:76:71: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
typedef typename conditional<Vectorizable,_RhsPacket,RhsScalar>::type RhsPacket;
^~~~~~~~~
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:77:71: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
typedef typename conditional<Vectorizable,_ResPacket,ResScalar>::type ResPacket;
^~~~~~~~~
In file included from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/Core:434:0,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from ScanBMA_full.cpp:6:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, -1, -1, 1, -1, -1>, 0>’:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, -1, -1, 1, -1, -1>, 1>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, -1, -1, 1, -1, -1>, 3>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Matrix<double, -1, -1, 1, -1, -1> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Matrix<double, -1, -1, 1, -1, -1> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<double, -1, -1, 1, -1, -1> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Solve.h:147:5: required from ‘static void Eigen::internal::Assignment<DstXprType, Eigen::Solve<DecType, RhsType>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op<Scalar, Scalar>&) [with DstXprType = Eigen::Matrix<double, -1, 1>; DecType = Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>; RhsType = Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0>; Scalar = double; Eigen::internal::Assignment<DstXprType, Eigen::Solve<DecType, RhsType>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense>::SrcXprType = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, 1>; Src = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >; Func = Eigen::internal::assign_op<double, double>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >; Derived = Eigen::Matrix<double, -1, 1>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:816:7: required from ‘void Eigen::PlainObjectBase<Derived>::_init1(const Eigen::DenseBase<ElseDerived>&) [with T = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >; OtherDerived = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >; Derived = Eigen::Matrix<double, -1, 1>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:294:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’
ScanBMA_full.cpp:57:52: required from here
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
>::type PacketReturnType;
^~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Map<const Eigen::Matrix<double, -1, -1, 1, -1, -1>, 0, Eigen::OuterStride<> >, 0>’:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Map<const Eigen::Matrix<double, -1, -1, 1, -1, -1>, 0, Eigen::OuterStride<> >, 2>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Map<const Eigen::Matrix<double, -1, -1, 1, -1, -1>, 0, Eigen::OuterStride<> > >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Map<const Eigen::Matrix<double, -1, -1, 1, -1, -1>, 0, Eigen::OuterStride<> > >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Map<const Eigen::Matrix<double, -1, -1, 1, -1, -1>, 0, Eigen::OuterStride<> >, 0>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Map.h:94:79: required from ‘class Eigen::Map<const Eigen::Matrix<double, -1, -1, 1, -1, -1>, 0, Eigen::OuterStride<> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/TriangularSolverVector.h:39:18: [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Solve.h:147:5: required from ‘static void Eigen::internal::Assignment<DstXprType, Eigen::Solve<DecType, RhsType>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op<Scalar, Scalar>&) [with DstXprType = Eigen::Matrix<double, -1, 1>; DecType = Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>; RhsType = Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0>; Scalar = double; Eigen::internal::Assignment<DstXprType, Eigen::Solve<DecType, RhsType>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense>::SrcXprType = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, 1>; Src = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >; Func = Eigen::internal::assign_op<double, double>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >; Derived = Eigen::Matrix<double, -1, 1>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:816:7: required from ‘void Eigen::PlainObjectBase<Derived>::_init1(const Eigen::DenseBase<ElseDerived>&) [with T = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >; OtherDerived = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >; Derived = Eigen::Matrix<double, -1, 1>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:294:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’
ScanBMA_full.cpp:57:52: required from here
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
In file included from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/Core:494:0,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from ScanBMA_full.cpp:6:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h: In instantiation of ‘struct Eigen::internal::general_matrix_vector_product<long int, double, Eigen::internal::const_blas_data_mapper<double, long int, 1>, 1, false, double, Eigen::internal::const_blas_data_mapper<double, long int, 0>, false, 0>’:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/TriangularSolverVector.h:65:115: required from ‘static void Eigen::internal::triangular_solve_vector<LhsScalar, RhsScalar, Index, 1, Mode, Conjugate, 1>::run(Index, const LhsScalar*, Index, RhsScalar*) [with LhsScalar = double; RhsScalar = double; Index = long int; int Mode = 2; bool Conjugate = false]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/SolveTriangular.h:73:12: required from ‘static void Eigen::internal::triangular_solver_selector<Lhs, Rhs, Side, Mode, 0, 1>::run(const Lhs&, Rhs&) [with Lhs = const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >; Rhs = Eigen::Matrix<double, -1, 1>; int Side = 1; int Mode = 2]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/SolveTriangular.h:182:21: required from ‘void Eigen::TriangularViewImpl<_MatrixType, _Mode, Eigen::Dense>::solveInPlace(const Eigen::MatrixBase<OtherDerived>&) const [with int Side = 1; OtherDerived = Eigen::Matrix<double, -1, 1>; _MatrixType = const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >; unsigned int _Mode = 2]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/TriangularMatrix.h:511:37: required from ‘void Eigen::TriangularViewImpl<_MatrixType, _Mode, Eigen::Dense>::solveInPlace(const Eigen::MatrixBase<OtherDerived>&) const [with OtherDerived = Eigen::Matrix<double, -1, 1>; _MatrixType = const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >; unsigned int _Mode = 2]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:505:3: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Solve.h:147:5: required from ‘static void Eigen::internal::Assignment<DstXprType, Eigen::Solve<DecType, RhsType>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op<Scalar, Scalar>&) [with DstXprType = Eigen::Matrix<double, -1, 1>; DecType = Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>; RhsType = Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0>; Scalar = double; Eigen::internal::Assignment<DstXprType, Eigen::Solve<DecType, RhsType>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense>::SrcXprType = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, 1>; Src = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >; Func = Eigen::internal::assign_op<double, double>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >; Derived = Eigen::Matrix<double, -1, 1>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:816:7: required from ‘void Eigen::PlainObjectBase<Derived>::_init1(const Eigen::DenseBase<ElseDerived>&) [with T = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >; OtherDerived = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >; Derived = Eigen::Matrix<double, -1, 1>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:294:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’
ScanBMA_full.cpp:57:52: required from here
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:351:71: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
typedef typename conditional<Vectorizable,_LhsPacket,LhsScalar>::type LhsPacket;
^~~~~~~~~
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:352:71: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
typedef typename conditional<Vectorizable,_RhsPacket,RhsScalar>::type RhsPacket;
^~~~~~~~~
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:353:71: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
typedef typename conditional<Vectorizable,_ResPacket,ResScalar>::type ResPacket;
^~~~~~~~~
In file included from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/Core:434:0,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from ScanBMA_full.cpp:6:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<const Eigen::Map<const Eigen::Matrix<double, -1, -1, 1, -1, -1>, 0, Eigen::OuterStride<> >, 1, -1, true>, 0>’:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<const Eigen::Map<const Eigen::Matrix<double, -1, -1, 1, -1, -1>, 0, Eigen::OuterStride<> >, 1, -1, true>, 2>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Block<const Eigen::Map<const Eigen::Matrix<double, -1, -1, 1, -1, -1>, 0, Eigen::OuterStride<> >, 1, -1, true> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Block<const Eigen::Map<const Eigen::Matrix<double, -1, -1, 1, -1, -1>, 0, Eigen::OuterStride<> >, 1, -1, true> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Block<const Eigen::Map<const Eigen::Matrix<double, -1, -1, 1, -1, -1>, 0, Eigen::OuterStride<> >, 1, -1, true>, 0>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from ‘class Eigen::internal::BlockImpl_dense<const Eigen::Map<const Eigen::Matrix<double, -1, -1, 1, -1, -1>, 0, Eigen::OuterStride<> >, 1, -1, true, true>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Solve.h:147:5: required from ‘static void Eigen::internal::Assignment<DstXprType, Eigen::Solve<DecType, RhsType>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op<Scalar, Scalar>&) [with DstXprType = Eigen::Matrix<double, -1, 1>; DecType = Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>; RhsType = Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0>; Scalar = double; Eigen::internal::Assignment<DstXprType, Eigen::Solve<DecType, RhsType>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense>::SrcXprType = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, 1>; Src = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >; Func = Eigen::internal::assign_op<double, double>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >; Derived = Eigen::Matrix<double, -1, 1>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:816:7: required from ‘void Eigen::PlainObjectBase<Derived>::_init1(const Eigen::DenseBase<ElseDerived>&) [with T = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >; OtherDerived = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >; Derived = Eigen::Matrix<double, -1, 1>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:294:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’
ScanBMA_full.cpp:57:52: required from here
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
>::type PacketReturnType;
^~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<const Eigen::Block<const Eigen::Map<const Eigen::Matrix<double, -1, -1, 1, -1, -1>, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false>, 0>’:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<const Eigen::Block<const Eigen::Map<const Eigen::Matrix<double, -1, -1, 1, -1, -1>, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false>, 2>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Block<const Eigen::Block<const Eigen::Map<const Eigen::Matrix<double, -1, -1, 1, -1, -1>, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Block<const Eigen::Block<const Eigen::Map<const Eigen::Matrix<double, -1, -1, 1, -1, -1>, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Block<const Eigen::Block<const Eigen::Map<const Eigen::Matrix<double, -1, -1, 1, -1, -1>, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false>, 0>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from ‘class Eigen::internal::BlockImpl_dense<const Eigen::Block<const Eigen::Map<const Eigen::Matrix<double, -1, -1, 1, -1, -1>, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false, true>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Solve.h:147:5: required from ‘static void Eigen::internal::Assignment<DstXprType, Eigen::Solve<DecType, RhsType>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op<Scalar, Scalar>&) [with DstXprType = Eigen::Matrix<double, -1, 1>; DecType = Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>; RhsType = Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0>; Scalar = double; Eigen::internal::Assignment<DstXprType, Eigen::Solve<DecType, RhsType>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense>::SrcXprType = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, 1>; Src = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >; Func = Eigen::internal::assign_op<double, double>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >; Derived = Eigen::Matrix<double, -1, 1>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:816:7: required from ‘void Eigen::PlainObjectBase<Derived>::_init1(const Eigen::DenseBase<ElseDerived>&) [with T = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >; OtherDerived = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >; Derived = Eigen::Matrix<double, -1, 1>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:294:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’
ScanBMA_full.cpp:57:52: required from here
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<const Eigen::Block<const Eigen::Block<const Eigen::Map<const Eigen::Matrix<double, -1, -1, 1, -1, -1>, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> >, 0>’:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<const Eigen::Block<const Eigen::Block<const Eigen::Map<const Eigen::Matrix<double, -1, -1, 1, -1, -1>, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> >, 2>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Transpose<const Eigen::Block<const Eigen::Block<const Eigen::Map<const Eigen::Matrix<double, -1, -1, 1, -1, -1>, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> > >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Transpose<const Eigen::Block<const Eigen::Block<const Eigen::Map<const Eigen::Matrix<double, -1, -1, 1, -1, -1>, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> > >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:115:37: required from ‘class Eigen::TransposeImpl<const Eigen::Block<const Eigen::Block<const Eigen::Map<const Eigen::Matrix<double, -1, -1, 1, -1, -1>, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false>, Eigen::Dense>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from ‘class Eigen::Transpose<const Eigen::Block<const Eigen::Block<const Eigen::Map<const Eigen::Matrix<double, -1, -1, 1, -1, -1>, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/TriangularSolverVector.h:78:60: [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Solve.h:147:5: required from ‘static void Eigen::internal::Assignment<DstXprType, Eigen::Solve<DecType, RhsType>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op<Scalar, Scalar>&) [with DstXprType = Eigen::Matrix<double, -1, 1>; DecType = Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>; RhsType = Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0>; Scalar = double; Eigen::internal::Assignment<DstXprType, Eigen::Solve<DecType, RhsType>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense>::SrcXprType = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, 1>; Src = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >; Func = Eigen::internal::assign_op<double, double>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >; Derived = Eigen::Matrix<double, -1, 1>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:816:7: required from ‘void Eigen::PlainObjectBase<Derived>::_init1(const Eigen::DenseBase<ElseDerived>&) [with T = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >; OtherDerived = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >; Derived = Eigen::Matrix<double, -1, 1>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:294:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’
ScanBMA_full.cpp:57:52: required from here
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Map<const Eigen::Matrix<double, -1, 1>, 0, Eigen::Stride<0, 0> >, 0>’:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Map<const Eigen::Matrix<double, -1, 1>, 0, Eigen::Stride<0, 0> >, 2>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Map<const Eigen::Matrix<double, -1, 1>, 0, Eigen::Stride<0, 0> > >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Map<const Eigen::Matrix<double, -1, 1>, 0, Eigen::Stride<0, 0> > >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Map<const Eigen::Matrix<double, -1, 1>, 0, Eigen::Stride<0, 0> >, 0>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Map.h:94:79: required from ‘class Eigen::Map<const Eigen::Matrix<double, -1, 1>, 0, Eigen::Stride<0, 0> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/TriangularSolverVector.h:78:73: [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Solve.h:147:5: required from ‘static void Eigen::internal::Assignment<DstXprType, Eigen::Solve<DecType, RhsType>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op<Scalar, Scalar>&) [with DstXprType = Eigen::Matrix<double, -1, 1>; DecType = Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>; RhsType = Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0>; Scalar = double; Eigen::internal::Assignment<DstXprType, Eigen::Solve<DecType, RhsType>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense>::SrcXprType = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, 1>; Src = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >; Func = Eigen::internal::assign_op<double, double>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >; Derived = Eigen::Matrix<double, -1, 1>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:816:7: required from ‘void Eigen::PlainObjectBase<Derived>::_init1(const Eigen::DenseBase<ElseDerived>&) [with T = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >; OtherDerived = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >; Derived = Eigen::Matrix<double, -1, 1>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:294:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’
ScanBMA_full.cpp:57:52: required from here
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Block<const Eigen::Map<const Eigen::Matrix<double, -1, -1, 1, -1, -1>, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> >, const Eigen::Map<const Eigen::Matrix<double, -1, 1>, 0, Eigen::Stride<0, 0> > >, 0>’:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Block<const Eigen::Map<const Eigen::Matrix<double, -1, -1, 1, -1, -1>, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> >, const Eigen::Map<const Eigen::Matrix<double, -1, 1>, 0, Eigen::Stride<0, 0> > > >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Block<const Eigen::Map<const Eigen::Matrix<double, -1, -1, 1, -1, -1>, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> >, const Eigen::Map<const Eigen::Matrix<double, -1, 1>, 0, Eigen::Stride<0, 0> > > >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Block<const Eigen::Map<const Eigen::Matrix<double, -1, -1, 1, -1, -1>, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> >, const Eigen::Map<const Eigen::Matrix<double, -1, 1>, 0, Eigen::Stride<0, 0> >, Eigen::Dense>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Block<const Eigen::Map<const Eigen::Matrix<double, -1, -1, 1, -1, -1>, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> >, const Eigen::Map<const Eigen::Matrix<double, -1, 1>, 0, Eigen::Stride<0, 0> > >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/TriangularSolverVector.h:78:124: required from ‘static void Eigen::internal::triangular_solve_vector<LhsScalar, RhsScalar, Index, 1, Mode, Conjugate, 1>::run(Index, const LhsScalar*, Index, RhsScalar*) [with LhsScalar = double; RhsScalar = double; Index = long int; int Mode = 2; bool Conjugate = false]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/SolveTriangular.h:73:12: [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Solve.h:147:5: required from ‘static void Eigen::internal::Assignment<DstXprType, Eigen::Solve<DecType, RhsType>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op<Scalar, Scalar>&) [with DstXprType = Eigen::Matrix<double, -1, 1>; DecType = Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>; RhsType = Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0>; Scalar = double; Eigen::internal::Assignment<DstXprType, Eigen::Solve<DecType, RhsType>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense>::SrcXprType = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, 1>; Src = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >; Func = Eigen::internal::assign_op<double, double>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >; Derived = Eigen::Matrix<double, -1, 1>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:816:7: required from ‘void Eigen::PlainObjectBase<Derived>::_init1(const Eigen::DenseBase<ElseDerived>&) [with T = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >; OtherDerived = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >; Derived = Eigen::Matrix<double, -1, 1>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:294:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’
ScanBMA_full.cpp:57:52: required from here
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
In file included from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/Core:368:0,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from ScanBMA_full.cpp:6:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/Memory.h: In instantiation of ‘Index Eigen::internal::first_default_aligned(const Scalar*, Index) [with Scalar = double; Index = long int]’:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:128:55: required from ‘static void Eigen::internal::general_matrix_vector_product<Index, LhsScalar, LhsMapper, 0, ConjugateLhs, RhsScalar, RhsMapper, ConjugateRhs, Version>::run(Index, Index, const LhsMapper&, const RhsMapper&, Eigen::internal::general_matrix_vector_product<Index, LhsScalar, LhsMapper, 0, ConjugateLhs, RhsScalar, RhsMapper, ConjugateRhs, Version>::ResScalar*, Index, RhsScalar) [with Index = long int; LhsScalar = double; LhsMapper = Eigen::internal::const_blas_data_mapper<double, long int, 0>; bool ConjugateLhs = false; RhsScalar = double; RhsMapper = Eigen::internal::const_blas_data_mapper<double, long int, 1>; bool ConjugateRhs = false; int Version = 0; Eigen::internal::general_matrix_vector_product<Index, LhsScalar, LhsMapper, 0, ConjugateLhs, RhsScalar, RhsMapper, ConjugateRhs, Version>::ResScalar = double]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/GeneralProduct.h:244:134: required from ‘static void Eigen::internal::gemv_dense_selector<2, 0, true>::run(const Lhs&, const Rhs&, Dest&, const typename Dest::Scalar&) [with Lhs = Eigen::Map<Eigen::Matrix<double, -1, -1> >; Rhs = Eigen::Matrix<double, -1, 1>; Dest = Eigen::Matrix<double, -1, 1>; typename Dest::Scalar = double]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:383:34: required from ‘static void Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::DenseShape, Eigen::DenseShape, 7>::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Matrix<double, -1, 1>; Lhs = Eigen::Map<Eigen::Matrix<double, -1, -1> >; Rhs = Eigen::Matrix<double, -1, 1>; Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::DenseShape, Eigen::DenseShape, 7>::Scalar = double]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:361:27: required from ‘static void Eigen::internal::generic_product_impl_base<Lhs, Rhs, Derived>::scaleAndAddTo(Dst&, const Lhs&, const Rhs&, const Scalar&) [with Dst = Eigen::Matrix<double, -1, 1>; Lhs = Eigen::Map<Eigen::Matrix<double, -1, -1> >; Rhs = Eigen::Matrix<double, -1, 1>; Derived = Eigen::internal::generic_product_impl<Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, 1>, Eigen::DenseShape, Eigen::DenseShape, 7>; Eigen::internal::generic_product_impl_base<Lhs, Rhs, Derived>::Scalar = double]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:349:33: required from ‘static void Eigen::internal::generic_product_impl_base<Lhs, Rhs, Derived>::evalTo(Dst&, const Lhs&, const Rhs&) [with Dst = Eigen::Matrix<double, -1, 1>; Lhs = Eigen::Map<Eigen::Matrix<double, -1, -1> >; Rhs = Eigen::Matrix<double, -1, 1>; Derived = Eigen::internal::generic_product_impl<Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, 1>, Eigen::DenseShape, Eigen::DenseShape, 7>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: required from ‘static void Eigen::internal::Assignment<DstXprType, Eigen::Product<Lhs, Rhs, Options>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == DefaultProduct) || (Options == AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op<Scalar, Scalar>&) [with DstXprType = Eigen::Matrix<double, -1, 1>; Lhs = Eigen::Map<Eigen::Matrix<double, -1, -1> >; Rhs = Eigen::Matrix<double, -1, 1>; int Options = 0; Scalar = double; Eigen::internal::Assignment<DstXprType, Eigen::Product<Lhs, Rhs, Options>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == DefaultProduct) || (Options == AliasFreeProduct))>::type>::SrcXprType = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, 1>, 0>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, 1>; Src = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, 1>, 0>; Func = Eigen::internal::assign_op<double, double>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, 1>, 0>; Derived = Eigen::Matrix<double, -1, 1>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:816:7: required from ‘void Eigen::PlainObjectBase<Derived>::_init1(const Eigen::DenseBase<ElseDerived>&) [with T = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, 1>, 0>; OtherDerived = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, 1>, 0>; Derived = Eigen::Matrix<double, -1, 1>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:294:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, 1>, 0>; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’
ScanBMA_full.cpp:58:36: required from here
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/Memory.h:470:10: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
return first_aligned<unpacket_traits<DefaultPacketType>::alignment>(array, size);
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/Core:494:0,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from ScanBMA_full.cpp:6:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h: In instantiation of ‘static void Eigen::internal::general_matrix_vector_product<Index, LhsScalar, LhsMapper, 0, ConjugateLhs, RhsScalar, RhsMapper, ConjugateRhs, Version>::run(Index, Index, const LhsMapper&, const RhsMapper&, Eigen::internal::general_matrix_vector_product<Index, LhsScalar, LhsMapper, 0, ConjugateLhs, RhsScalar, RhsMapper, ConjugateRhs, Version>::ResScalar*, Index, RhsScalar) [with Index = long int; LhsScalar = double; LhsMapper = Eigen::internal::const_blas_data_mapper<double, long int, 0>; bool ConjugateLhs = false; RhsScalar = double; RhsMapper = Eigen::internal::const_blas_data_mapper<double, long int, 0>; bool ConjugateRhs = false; int Version = 0; Eigen::internal::general_matrix_vector_product<Index, LhsScalar, LhsMapper, 0, ConjugateLhs, RhsScalar, RhsMapper, ConjugateRhs, Version>::ResScalar = double]’:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/TriangularSolverVector.h:131:115: required from ‘static void Eigen::internal::triangular_solve_vector<LhsScalar, RhsScalar, Index, 1, Mode, Conjugate, 0>::run(Index, const LhsScalar*, Index, RhsScalar*) [with LhsScalar = double; RhsScalar = double; Index = long int; int Mode = 1; bool Conjugate = false]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/SolveTriangular.h:73:12: required from ‘static void Eigen::internal::triangular_solver_selector<Lhs, Rhs, Side, Mode, 0, 1>::run(const Lhs&, Rhs&) [with Lhs = const Eigen::Matrix<double, -1, -1>; Rhs = Eigen::Matrix<double, -1, 1>; int Side = 1; int Mode = 1]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/SolveTriangular.h:182:21: required from ‘void Eigen::TriangularViewImpl<_MatrixType, _Mode, Eigen::Dense>::solveInPlace(const Eigen::MatrixBase<OtherDerived>&) const [with int Side = 1; OtherDerived = Eigen::Matrix<double, -1, 1>; _MatrixType = const Eigen::Matrix<double, -1, -1>; unsigned int _Mode = 1]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/TriangularMatrix.h:511:37: required from ‘void Eigen::TriangularViewImpl<_MatrixType, _Mode, Eigen::Dense>::solveInPlace(const Eigen::MatrixBase<OtherDerived>&) const [with OtherDerived = Eigen::Matrix<double, -1, 1>; _MatrixType = const Eigen::Matrix<double, -1, -1>; unsigned int _Mode = 1]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:504:3: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Solve.h:147:5: required from ‘static void Eigen::internal::Assignment<DstXprType, Eigen::Solve<DecType, RhsType>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op<Scalar, Scalar>&) [with DstXprType = Eigen::Matrix<double, -1, 1>; DecType = Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>; RhsType = Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0>; Scalar = double; Eigen::internal::Assignment<DstXprType, Eigen::Solve<DecType, RhsType>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense>::SrcXprType = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, 1>; Src = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >; Func = Eigen::internal::assign_op<double, double>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >; Derived = Eigen::Matrix<double, -1, 1>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:816:7: required from ‘void Eigen::PlainObjectBase<Derived>::_init1(const Eigen::DenseBase<ElseDerived>&) [with T = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >; OtherDerived = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >; Derived = Eigen::Matrix<double, -1, 1>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:294:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’
ScanBMA_full.cpp:57:52: required from here
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:112:62: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
conj_helper<LhsPacket,RhsPacket,ConjugateLhs,ConjugateRhs> pcj;
^~~
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:112:62: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h: In instantiation of ‘static void Eigen::internal::general_matrix_vector_product<Index, LhsScalar, LhsMapper, 1, ConjugateLhs, RhsScalar, RhsMapper, ConjugateRhs, Version>::run(Index, Index, const LhsMapper&, const RhsMapper&, Eigen::internal::general_matrix_vector_product<Index, LhsScalar, LhsMapper, 1, ConjugateLhs, RhsScalar, RhsMapper, ConjugateRhs, Version>::ResScalar*, Index, Eigen::internal::general_matrix_vector_product<Index, LhsScalar, LhsMapper, 1, ConjugateLhs, RhsScalar, RhsMapper, ConjugateRhs, Version>::ResScalar) [with Index = long int; LhsScalar = double; LhsMapper = Eigen::internal::const_blas_data_mapper<double, long int, 1>; bool ConjugateLhs = false; RhsScalar = double; RhsMapper = Eigen::internal::const_blas_data_mapper<double, long int, 0>; bool ConjugateRhs = false; int Version = 0; Eigen::internal::general_matrix_vector_product<Index, LhsScalar, LhsMapper, 1, ConjugateLhs, RhsScalar, RhsMapper, ConjugateRhs, Version>::ResScalar = double]’:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/TriangularSolverVector.h:65:115: required from ‘static void Eigen::internal::triangular_solve_vector<LhsScalar, RhsScalar, Index, 1, Mode, Conjugate, 1>::run(Index, const LhsScalar*, Index, RhsScalar*) [with LhsScalar = double; RhsScalar = double; Index = long int; int Mode = 2; bool Conjugate = false]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/SolveTriangular.h:73:12: required from ‘static void Eigen::internal::triangular_solver_selector<Lhs, Rhs, Side, Mode, 0, 1>::run(const Lhs&, Rhs&) [with Lhs = const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >; Rhs = Eigen::Matrix<double, -1, 1>; int Side = 1; int Mode = 2]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/SolveTriangular.h:182:21: required from ‘void Eigen::TriangularViewImpl<_MatrixType, _Mode, Eigen::Dense>::solveInPlace(const Eigen::MatrixBase<OtherDerived>&) const [with int Side = 1; OtherDerived = Eigen::Matrix<double, -1, 1>; _MatrixType = const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >; unsigned int _Mode = 2]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/TriangularMatrix.h:511:37: required from ‘void Eigen::TriangularViewImpl<_MatrixType, _Mode, Eigen::Dense>::solveInPlace(const Eigen::MatrixBase<OtherDerived>&) const [with OtherDerived = Eigen::Matrix<double, -1, 1>; _MatrixType = const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >; unsigned int _Mode = 2]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:505:3: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Solve.h:147:5: required from ‘static void Eigen::internal::Assignment<DstXprType, Eigen::Solve<DecType, RhsType>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op<Scalar, Scalar>&) [with DstXprType = Eigen::Matrix<double, -1, 1>; DecType = Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>; RhsType = Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0>; Scalar = double; Eigen::internal::Assignment<DstXprType, Eigen::Solve<DecType, RhsType>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense>::SrcXprType = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, 1>; Src = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >; Func = Eigen::internal::assign_op<double, double>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >; Derived = Eigen::Matrix<double, -1, 1>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:816:7: required from ‘void Eigen::PlainObjectBase<Derived>::_init1(const Eigen::DenseBase<ElseDerived>&) [with T = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >; OtherDerived = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >; Derived = Eigen::Matrix<double, -1, 1>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:294:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’
ScanBMA_full.cpp:57:52: required from here
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:385:62: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
conj_helper<LhsPacket,RhsPacket,ConjugateLhs,ConjugateRhs> pcj;
^~~
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:385:62: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
In file included from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/Core:440:0,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from ScanBMA_full.cpp:6:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator<Eigen::Block<const Eigen::Map<const Eigen::Matrix<double, -1, -1, 1, -1, -1>, 0, Eigen::OuterStride<> >, 1, -1, true> >’:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8: required from ‘struct Eigen::internal::evaluator<const Eigen::Block<const Eigen::Map<const Eigen::Matrix<double, -1, -1, 1, -1, -1>, 0, Eigen::OuterStride<> >, 1, -1, true> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:960:8: required from ‘struct Eigen::internal::evaluator<Eigen::Block<const Eigen::Block<const Eigen::Map<const Eigen::Matrix<double, -1, -1, 1, -1, -1>, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8: required from ‘struct Eigen::internal::evaluator<const Eigen::Block<const Eigen::Block<const Eigen::Map<const Eigen::Matrix<double, -1, -1, 1, -1, -1>, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:269:8: required from ‘struct Eigen::internal::unary_evaluator<Eigen::Transpose<const Eigen::Block<const Eigen::Block<const Eigen::Map<const Eigen::Matrix<double, -1, -1, 1, -1, -1>, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> >, Eigen::internal::IndexBased, double>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8: required from ‘struct Eigen::internal::evaluator<Eigen::Transpose<const Eigen::Block<const Eigen::Block<const Eigen::Map<const Eigen::Matrix<double, -1, -1, 1, -1, -1>, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> > >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8: [ skipping 12 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Solve.h:147:5: required from ‘static void Eigen::internal::Assignment<DstXprType, Eigen::Solve<DecType, RhsType>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op<Scalar, Scalar>&) [with DstXprType = Eigen::Matrix<double, -1, 1>; DecType = Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>; RhsType = Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0>; Scalar = double; Eigen::internal::Assignment<DstXprType, Eigen::Solve<DecType, RhsType>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense>::SrcXprType = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, 1>; Src = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >; Func = Eigen::internal::assign_op<double, double>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >; Derived = Eigen::Matrix<double, -1, 1>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:816:7: required from ‘void Eigen::PlainObjectBase<Derived>::_init1(const Eigen::DenseBase<ElseDerived>&) [with T = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >; OtherDerived = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >; Derived = Eigen::Matrix<double, -1, 1>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:294:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’
ScanBMA_full.cpp:57:52: required from here
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:960:8: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
enum {
^
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator<Eigen::Block<const Eigen::Block<const Eigen::Map<const Eigen::Matrix<double, -1, -1, 1, -1, -1>, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> >’:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8: required from ‘struct Eigen::internal::evaluator<const Eigen::Block<const Eigen::Block<const Eigen::Map<const Eigen::Matrix<double, -1, -1, 1, -1, -1>, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:269:8: required from ‘struct Eigen::internal::unary_evaluator<Eigen::Transpose<const Eigen::Block<const Eigen::Block<const Eigen::Map<const Eigen::Matrix<double, -1, -1, 1, -1, -1>, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> >, Eigen::internal::IndexBased, double>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8: required from ‘struct Eigen::internal::evaluator<Eigen::Transpose<const Eigen::Block<const Eigen::Block<const Eigen::Map<const Eigen::Matrix<double, -1, -1, 1, -1, -1>, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> > >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8: required from ‘struct Eigen::internal::evaluator<const Eigen::Transpose<const Eigen::Block<const Eigen::Block<const Eigen::Map<const Eigen::Matrix<double, -1, -1, 1, -1, -1>, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> > >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:681:51: required from ‘struct Eigen::internal::binary_evaluator<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Block<const Eigen::Map<const Eigen::Matrix<double, -1, -1, 1, -1, -1>, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> >, const Eigen::Map<const Eigen::Matrix<double, -1, 1>, 0, Eigen::Stride<0, 0> > >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:665:8: [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Solve.h:147:5: required from ‘static void Eigen::internal::Assignment<DstXprType, Eigen::Solve<DecType, RhsType>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op<Scalar, Scalar>&) [with DstXprType = Eigen::Matrix<double, -1, 1>; DecType = Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>; RhsType = Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0>; Scalar = double; Eigen::internal::Assignment<DstXprType, Eigen::Solve<DecType, RhsType>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense>::SrcXprType = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, 1>; Src = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >; Func = Eigen::internal::assign_op<double, double>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >; Derived = Eigen::Matrix<double, -1, 1>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:816:7: required from ‘void Eigen::PlainObjectBase<Derived>::_init1(const Eigen::DenseBase<ElseDerived>&) [with T = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >; OtherDerived = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >; Derived = Eigen::Matrix<double, -1, 1>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:294:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’
ScanBMA_full.cpp:57:52: required from here
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:960:8: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
In file included from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/Core:434:0,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from ScanBMA_full.cpp:6:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase<Derived>&) [with Derived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Block<const Eigen::Map<const Eigen::Matrix<double, -1, -1, 1, -1, -1>, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> >, const Eigen::Map<const Eigen::Matrix<double, -1, 1>, 0, Eigen::Stride<0, 0> > >; Eigen::Index = long int]’:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:225:63: required from ‘static Eigen::internal::redux_impl<Func, Derived, 3, 0>::Scalar Eigen::internal::redux_impl<Func, Derived, 3, 0>::run(const Derived&, const Func&) [with Func = Eigen::internal::scalar_sum_op<double, double>; Derived = Eigen::internal::redux_evaluator<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Block<const Eigen::Map<const Eigen::Matrix<double, -1, -1, 1, -1, -1>, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> >, const Eigen::Map<const Eigen::Matrix<double, -1, 1>, 0, Eigen::Stride<0, 0> > > >; Eigen::internal::redux_impl<Func, Derived, 3, 0>::Scalar = double]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op<double, double>; Derived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Block<const Eigen::Map<const Eigen::Matrix<double, -1, -1, 1, -1, -1>, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> >, const Eigen::Map<const Eigen::Matrix<double, -1, 1>, 0, Eigen::Stride<0, 0> > >; typename Eigen::internal::traits<T>::Scalar = double]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:453:73: required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::sum() const [with Derived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Block<const Eigen::Map<const Eigen::Matrix<double, -1, -1, 1, -1, -1>, 0, Eigen::OuterStride<> >, 1, -1, true>, 1, -1, false> >, const Eigen::Map<const Eigen::Matrix<double, -1, 1>, 0, Eigen::Stride<0, 0> > >; typename Eigen::internal::traits<T>::Scalar = double]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/TriangularSolverVector.h:78:18: required from ‘static void Eigen::internal::triangular_solve_vector<LhsScalar, RhsScalar, Index, 1, Mode, Conjugate, 1>::run(Index, const LhsScalar*, Index, RhsScalar*) [with LhsScalar = double; RhsScalar = double; Index = long int; int Mode = 2; bool Conjugate = false]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/SolveTriangular.h:73:12: required from ‘static void Eigen::internal::triangular_solver_selector<Lhs, Rhs, Side, Mode, 0, 1>::run(const Lhs&, Rhs&) [with Lhs = const Eigen::Transpose<const Eigen::Matrix<double, -1, -1> >; Rhs = Eigen::Matrix<double, -1, 1>; int Side = 1; int Mode = 2]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/SolveTriangular.h:182:21: [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Solve.h:147:5: required from ‘static void Eigen::internal::Assignment<DstXprType, Eigen::Solve<DecType, RhsType>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op<Scalar, Scalar>&) [with DstXprType = Eigen::Matrix<double, -1, 1>; DecType = Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>; RhsType = Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0>; Scalar = double; Eigen::internal::Assignment<DstXprType, Eigen::Solve<DecType, RhsType>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense>::SrcXprType = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, 1>; Src = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >; Func = Eigen::internal::assign_op<double, double>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >; Derived = Eigen::Matrix<double, -1, 1>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:816:7: required from ‘void Eigen::PlainObjectBase<Derived>::_init1(const Eigen::DenseBase<ElseDerived>&) [with T = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >; OtherDerived = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >; Derived = Eigen::Matrix<double, -1, 1>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:294:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’
ScanBMA_full.cpp:57:52: required from here
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:650:34: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
return internal::first_aligned<int(unpacket_traits<DefaultPacketType>::alignment),Derived>(m);
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/Core:440:0,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from ScanBMA_full.cpp:6:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator<Eigen::Block<const Eigen::Map<const Eigen::Matrix<double, -1, -1>, 0, Eigen::OuterStride<> >, -1, 1, true> >’:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8: required from ‘struct Eigen::internal::evaluator<const Eigen::Block<const Eigen::Map<const Eigen::Matrix<double, -1, -1>, 0, Eigen::OuterStride<> >, -1, 1, true> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:960:8: required from ‘struct Eigen::internal::evaluator<Eigen::Block<const Eigen::Block<const Eigen::Map<const Eigen::Matrix<double, -1, -1>, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8: required from ‘struct Eigen::internal::evaluator<const Eigen::Block<const Eigen::Block<const Eigen::Map<const Eigen::Matrix<double, -1, -1>, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:681:51: required from ‘struct Eigen::internal::binary_evaluator<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, 1> >, const Eigen::Block<const Eigen::Block<const Eigen::Map<const Eigen::Matrix<double, -1, -1>, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false> >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:665:8: required from ‘struct Eigen::internal::evaluator<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, 1> >, const Eigen::Block<const Eigen::Block<const Eigen::Map<const Eigen::Matrix<double, -1, -1>, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false> > >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:730:20: [ skipping 11 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Solve.h:147:5: required from ‘static void Eigen::internal::Assignment<DstXprType, Eigen::Solve<DecType, RhsType>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op<Scalar, Scalar>&) [with DstXprType = Eigen::Matrix<double, -1, 1>; DecType = Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>; RhsType = Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0>; Scalar = double; Eigen::internal::Assignment<DstXprType, Eigen::Solve<DecType, RhsType>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense>::SrcXprType = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, 1>; Src = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >; Func = Eigen::internal::assign_op<double, double>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >; Derived = Eigen::Matrix<double, -1, 1>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:816:7: required from ‘void Eigen::PlainObjectBase<Derived>::_init1(const Eigen::DenseBase<ElseDerived>&) [with T = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >; OtherDerived = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >; Derived = Eigen::Matrix<double, -1, 1>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:294:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’
ScanBMA_full.cpp:57:52: required from here
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:960:8: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
enum {
^
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator<Eigen::Block<const Eigen::Block<const Eigen::Map<const Eigen::Matrix<double, -1, -1>, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false> >’:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8: required from ‘struct Eigen::internal::evaluator<const Eigen::Block<const Eigen::Block<const Eigen::Map<const Eigen::Matrix<double, -1, -1>, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:681:51: required from ‘struct Eigen::internal::binary_evaluator<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, 1> >, const Eigen::Block<const Eigen::Block<const Eigen::Map<const Eigen::Matrix<double, -1, -1>, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false> >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:665:8: required from ‘struct Eigen::internal::evaluator<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, 1> >, const Eigen::Block<const Eigen::Block<const Eigen::Map<const Eigen::Matrix<double, -1, -1>, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false> > >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:730:20: required from ‘void Eigen::internal::call_dense_assignment_loop(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Map<Eigen::Matrix<double, -1, 1> >; SrcXprType = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, 1> >, const Eigen::Block<const Eigen::Block<const Eigen::Map<const Eigen::Matrix<double, -1, -1>, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false> >; Functor = Eigen::internal::sub_assign_op<double, double>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:879:31: required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Map<Eigen::Matrix<double, -1, 1> >; SrcXprType = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Matrix<double, -1, 1> >, const Eigen::Block<const Eigen::Block<const Eigen::Map<const Eigen::Matrix<double, -1, -1>, 0, Eigen::OuterStride<> >, -1, 1, true>, -1, 1, false> >; Functor = Eigen::internal::sub_assign_op<double, double>; Weak = void]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Solve.h:147:5: required from ‘static void Eigen::internal::Assignment<DstXprType, Eigen::Solve<DecType, RhsType>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op<Scalar, Scalar>&) [with DstXprType = Eigen::Matrix<double, -1, 1>; DecType = Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>; RhsType = Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0>; Scalar = double; Eigen::internal::Assignment<DstXprType, Eigen::Solve<DecType, RhsType>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense>::SrcXprType = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, 1>; Src = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >; Func = Eigen::internal::assign_op<double, double>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >; Derived = Eigen::Matrix<double, -1, 1>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:816:7: required from ‘void Eigen::PlainObjectBase<Derived>::_init1(const Eigen::DenseBase<ElseDerived>&) [with T = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >; OtherDerived = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >; Derived = Eigen::Matrix<double, -1, 1>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:294:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’
ScanBMA_full.cpp:57:52: required from here
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:960:8: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
In file included from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/Core:434:0,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
from /home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
from ScanBMA_full.cpp:6:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Matrix<double, -1, 1>, -1, 1, true>, 0>’:
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Matrix<double, -1, 1>, -1, 1, true>, 1>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Matrix<double, -1, 1>, -1, 1, true>, 3>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Block<Eigen::Matrix<double, -1, 1>, -1, 1, true> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase<Eigen::Block<Eigen::Matrix<double, -1, 1>, -1, 1, true> >’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Block<Eigen::Matrix<double, -1, 1>, -1, 1, true>, 0>’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:219:34: [ skipping 18 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Solve.h:147:5: required from ‘static void Eigen::internal::Assignment<DstXprType, Eigen::Solve<DecType, RhsType>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op<Scalar, Scalar>&) [with DstXprType = Eigen::Matrix<double, -1, 1>; DecType = Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>; RhsType = Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0>; Scalar = double; Eigen::internal::Assignment<DstXprType, Eigen::Solve<DecType, RhsType>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense>::SrcXprType = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, 1>; Src = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >; Func = Eigen::internal::assign_op<double, double>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >; Derived = Eigen::Matrix<double, -1, 1>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:816:7: required from ‘void Eigen::PlainObjectBase<Derived>::_init1(const Eigen::DenseBase<ElseDerived>&) [with T = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >; OtherDerived = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >; Derived = Eigen::Matrix<double, -1, 1>]’
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:294:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Solve<Eigen::LLT<Eigen::Matrix<double, -1, -1>, 1>, Eigen::Product<Eigen::Transpose<const Eigen::Map<Eigen::Matrix<double, -1, -1> > >, Eigen::Map<Eigen::Matrix<double, -1, 1> >, 0> >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’
ScanBMA_full.cpp:57:52: required from here
/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type {aka __vector(2) double}’ [-Wignored-attributes]
>::type PacketReturnType;
^~~~~~~~~~~~~~~~
g++ -std=gnu++11 -I"/home/biocbuild/bbs-3.10-bioc/R/include" -DNDEBUG -I./include -I"/home/biocbuild/bbs-3.10-bioc/R/library/Rcpp/include" -I"/home/biocbuild/bbs-3.10-bioc/R/library/RcppArmadillo/include" -I"/home/biocbuild/bbs-3.10-bioc/R/library/RcppEigen/include" -I"/home/biocbuild/bbs-3.10-bioc/R/library/BH/include" -I/usr/local/include -fpic -g -O2 -Wall -c fastBMAR.cpp -o fastBMAR.o
In file included from fastBMAR.cpp:3:0:
fastBMA.hpp: In member function ‘unsigned char BitArray::getBit(size_t)’:
fastBMA.hpp:123:30: warning: suggest parentheses around ‘-’ inside ‘>>’ [-Wparentheses]
return (array[index/8] >> 7-(index & 0x7)) & 0x1;
~^~~~~~~~~~~~~~
fastBMA.hpp: In member function ‘unsigned char BitArray::setBit(size_t)’:
fastBMA.hpp:126:44: warning: suggest parentheses around ‘-’ inside ‘<<’ [-Wparentheses]
array[index/8] = array[index/8] | 1 << 7-(index & 0x7);
~^~~~~~~~~~~~~~
fastBMA.hpp: In member function ‘uint_fast32_t std::hash<CompactModelIndices<long unsigned int> >::operator()(const CompactModelIndices<long unsigned int>&) const’:
fastBMA.hpp:721:18: warning: suggest parentheses around arithmetic in operand of ‘|’ [-Wparentheses]
return(hash & 0xFFFFFFF0 | size);
~~~~~^~~~~~~~~~~~
fastBMA.hpp:723:24: warning: suggest parentheses around arithmetic in operand of ‘|’ [-Wparentheses]
return(k.hashValue & 0xFFFFFFF0 | size);
~~~~~~~~~~~~^~~~~~~~~~~~
fastBMA.hpp: In member function ‘uint_fast32_t std::hash<ModelIndicesHash<unsigned int> >::operator()(const ModelIndicesHash<unsigned int>&) const’:
fastBMA.hpp:762:24: warning: suggest parentheses around arithmetic in operand of ‘|’ [-Wparentheses]
return(k.hashValue & 0xFFFFFFF0 | size);
~~~~~~~~~~~~^~~~~~~~~~~~
fastBMA.hpp: In member function ‘float EdgeList::dijkstra_limit(int, int, float, float**, float)’:
fastBMA.hpp:1107:6: warning: variable ‘path_found’ set but not used [-Wunused-but-set-variable]
int path_found=0;
^~~~~~~~~~
fastBMA.hpp: In member function ‘float* EdgeList::cutter_prune_edges(float, float)’:
fastBMA.hpp:1226:31: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
if (((*((unsigned int*)&val) & 2147483648u)) or (val >= upper_threshold) )adjMatrix[i] = 2.0f;
^
fastBMA.hpp: In function ‘void mtrv(int, int, double*, int, double*, double*)’:
fastBMA.hpp:1922:14: warning: unused variable ‘izero’ [-Wunused-variable]
int ione=1,izero=0;
^~~~~
fastBMAR.cpp: In function ‘const List fastBMA_g(Rcpp::NumericMatrix, int, Rcpp::NumericMatrix, double, int, double, Rcpp::CharacterVector, int, int, int, int, int, bool, bool, bool, double, double, double, double)’:
fastBMAR.cpp:33:7: warning: unused variable ‘colNum’ [-Wunused-variable]
int colNum = x.ncol();
^~~~~~
In file included from fastBMAR.cpp:3:0:
fastBMA.hpp: In instantiation of ‘uint64_t PackedBitArray<T>::get(uint8_t, size_t) [with T = long unsigned int; uint64_t = long unsigned int; uint8_t = unsigned char; size_t = long unsigned int]’:
fastBMA.hpp:719:50: required from here
fastBMA.hpp:186:27: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
for(int i=startIndex+1;i<endIndex;i++){
~^~~~~~~~~
fastBMA.hpp:187:62: warning: suggest parentheses around ‘-’ inside ‘<<’ [-Wparentheses]
retValue |= ((uint64_t) array[i]) << elementSize-bitsRead-tBits;
~~~~~~~~~~~~~~~~~~~~^~~~~~
In file included from fastBMAR.cpp:4:0:
bmaNoMPI.hpp: In instantiation of ‘void findEdges(BMARetStruct*, T**, T**, std::vector<std::__cxx11::basic_string<char> >&, int, int, int, bool, bool, bool, int, int, int, int, float, float, float, float, float, float, int, int) [with T = double]’:
fastBMAR.cpp:150:2: required from here
bmaNoMPI.hpp:121:15: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
for(int k=0;k<evalSubset.size();k++){
~^~~~~~~~~~~~~~~~~~
bmaNoMPI.hpp:145:16: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
for(int j=0;j<thChildren[th].size();j++){
~^~~~~~~~~~~~~~~~~~~~~~
In file included from fastBMAR.cpp:3:0:
fastBMA.hpp: In instantiation of ‘void initRegressParms(T*, T*, T**, int, int, int, int, int&, int, bool) [with T = double]’:
bmaNoMPI.hpp:102:21: required from ‘void findEdges(BMARetStruct*, T**, T**, std::vector<std::__cxx11::basic_string<char> >&, int, int, int, bool, bool, bool, int, int, int, int, float, float, float, float, float, float, int, int) [with T = double]’
fastBMAR.cpp:150:2: required from here
fastBMA.hpp:1701:7: warning: value computed is not used [-Wunused-value]
*dest++;
^
fastBMA.hpp: In instantiation of ‘int fastScanBMA_g(T*, T*, T, T, int, T*, bool, double*, int*, int, int, int, double, double, int, int) [with T = double]’:
fastBMA.hpp:1757:26: required from ‘int findRegulators(T, int, int, float, float, int, int, bool, int, T**, T**, int*, double*, T*, T*, int, int, int, int, int, int) [with T = double]’
bmaNoMPI.hpp:127:28: required from ‘void findEdges(BMARetStruct*, T**, T**, std::vector<std::__cxx11::basic_string<char> >&, int, int, int, bool, bool, bool, int, int, int, int, float, float, float, float, float, float, int, int) [with T = double]’
fastBMAR.cpp:150:2: required from here
fastBMA.hpp:1406:10: warning: unused variable ‘g0’ [-Wunused-variable]
double g0=g;
^~
fastBMA.hpp:1408:10: warning: variable ‘r2’ set but not used [-Wunused-but-set-variable]
Result r2 = boost::math::tools::brent_find_minima(BMAoptimizeFunction<T>(ATA,nVars,nRows,nCols,pord,ATb,sst,btb,postProbs,parents,&npostProbs,logpriors,twoLogOR), (T) 1, (T)nRows, optimizeBits, max_iter);
^~
fastBMA.hpp:1401:6: warning: unused variable ‘nIterations’ [-Wunused-variable]
int nIterations=0;
^~~~~~~~~~~
fastBMA.hpp:1402:7: warning: unused variable ‘doneOptimizing’ [-Wunused-variable]
bool doneOptimizing=0;
^~~~~~~~~~~~~~
fastBMA.hpp: In instantiation of ‘T chooseBestModels(double, T*, int, int, int, int*, T*, T, T, double*, int*, int*, double*, double) [with T = double]’:
fastBMA.hpp:1414:19: required from ‘int fastScanBMA_g(T*, T*, T, T, int, T*, bool, double*, int*, int, int, int, double, double, int, int) [with T = double]’
fastBMA.hpp:1757:26: required from ‘int findRegulators(T, int, int, float, float, int, int, bool, int, T**, T**, int*, double*, T*, T*, int, int, int, int, int, int) [with T = double]’
bmaNoMPI.hpp:127:28: required from ‘void findEdges(BMARetStruct*, T**, T**, std::vector<std::__cxx11::basic_string<char> >&, int, int, int, bool, bool, bool, int, int, int, int, float, float, float, float, float, float, int, int) [with T = double]’
fastBMAR.cpp:150:2: required from here
fastBMA.hpp:1661:5: warning: unused variable ‘rvalue’ [-Wunused-variable]
T rvalue=0;
^~~~~~
fastBMA.hpp: In instantiation of ‘CompactModelIndices<T>::CompactModelIndices() [with T = long unsigned int]’:
fastBMA.hpp:781:63: required from ‘ModelSet<T>::ModelSet(ModelIndices, T, T, double) [with T = double]’
fastBMA.hpp:1430:23: required from ‘T chooseBestModels(double, T*, int, int, int, int*, T*, T, T, double*, int*, int*, double*, double) [with T = double]’
fastBMA.hpp:1414:19: required from ‘int fastScanBMA_g(T*, T*, T, T, int, T*, bool, double*, int*, int, int, int, double, double, int, int) [with T = double]’
fastBMA.hpp:1757:26: required from ‘int findRegulators(T, int, int, float, float, int, int, bool, int, T**, T**, int*, double*, T*, T*, int, int, int, int, int, int) [with T = double]’
bmaNoMPI.hpp:127:28: required from ‘void findEdges(BMARetStruct*, T**, T**, std::vector<std::__cxx11::basic_string<char> >&, int, int, int, bool, bool, bool, int, int, int, int, float, float, float, float, float, float, int, int) [with T = double]’
fastBMAR.cpp:150:2: required from here
fastBMA.hpp:625:12: warning: unused variable ‘modelBits’ [-Wunused-variable]
uint8_t modelBits=gModelBits;
^~~~~~~~~
fastBMA.hpp:626:12: warning: unused variable ‘nModels’ [-Wunused-variable]
uint8_t nModels=0;
^~~~~~~
fastBMA.hpp: In instantiation of ‘CompactModelIndices<T>::CompactModelIndices(ModelIndices&) [with T = long unsigned int]’:
fastBMA.hpp:782:17: required from ‘ModelSet<T>::ModelSet(ModelIndices, T, T, double) [with T = double]’
fastBMA.hpp:1430:23: required from ‘T chooseBestModels(double, T*, int, int, int, int*, T*, T, T, double*, int*, int*, double*, double) [with T = double]’
fastBMA.hpp:1414:19: required from ‘int fastScanBMA_g(T*, T*, T, T, int, T*, bool, double*, int*, int, int, int, double, double, int, int) [with T = double]’
fastBMA.hpp:1757:26: required from ‘int findRegulators(T, int, int, float, float, int, int, bool, int, T**, T**, int*, double*, T*, T*, int, int, int, int, int, int) [with T = double]’
bmaNoMPI.hpp:127:28: required from ‘void findEdges(BMARetStruct*, T**, T**, std::vector<std::__cxx11::basic_string<char> >&, int, int, int, bool, bool, bool, int, int, int, int, float, float, float, float, float, float, int, int) [with T = double]’
fastBMAR.cpp:150:2: required from here
fastBMA.hpp:621:19: warning: ‘CompactModelIndices<long unsigned int>::nModels’ will be initialized after [-Wreorder]
uint8_t nModels=0; //never more than 256 variables in a model
^
fastBMA.hpp:619:17: warning: ‘uint_fast32_t CompactModelIndices<long unsigned int>::hashValue’ [-Wreorder]
uint_fast32_t hashValue;
^~~~~~~~~
fastBMA.hpp:662:3: warning: when initialized here [-Wreorder]
CompactModelIndices( ModelIndices &mind): nModels(mind.nModels),hashValue(mind.hashValue){
^~~~~~~~~~~~~~~~~~~
fastBMA.hpp: In instantiation of ‘void PackedBitArray<T>::set(uint8_t, size_t, uint64_t) [with T = long unsigned int; uint8_t = unsigned char; size_t = long unsigned int; uint64_t = long unsigned int]’:
fastBMA.hpp:668:6: required from ‘CompactModelIndices<T>::CompactModelIndices(ModelIndices&) [with T = long unsigned int]’
fastBMA.hpp:782:17: required from ‘ModelSet<T>::ModelSet(ModelIndices, T, T, double) [with T = double]’
fastBMA.hpp:1430:23: required from ‘T chooseBestModels(double, T*, int, int, int, int*, T*, T, T, double*, int*, int*, double*, double) [with T = double]’
fastBMA.hpp:1414:19: required from ‘int fastScanBMA_g(T*, T*, T, T, int, T*, bool, double*, int*, int, int, int, double, double, int, int) [with T = double]’
fastBMA.hpp:1757:26: required from ‘int findRegulators(T, int, int, float, float, int, int, bool, int, T**, T**, int*, double*, T*, T*, int, int, int, int, int, int) [with T = double]’
bmaNoMPI.hpp:127:28: required from ‘void findEdges(BMARetStruct*, T**, T**, std::vector<std::__cxx11::basic_string<char> >&, int, int, int, bool, bool, bool, int, int, int, int, float, float, float, float, float, float, int, int) [with T = double]’
fastBMAR.cpp:150:2: required from here
fastBMA.hpp:212:40: warning: suggest parentheses around arithmetic in operand of ‘|’ [-Wparentheses]
array[startIndex]=array[startIndex] & ~mask | ((T) value << (tBits- bitOffset -elementSize));
~~~~~~~~~~~~~~~~~~^~~~~~~
fastBMA.hpp:225:77: warning: suggest parentheses around ‘-’ inside ‘>>’ [-Wparentheses]
array[startIndex]=(array[startIndex] & mask) | (T)(value >> elementSize - (tBits-bitOffset));
~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
fastBMA.hpp:228:28: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
for(int i=startIndex+1;i<endIndex;i++){
~^~~~~~~~~
fastBMA.hpp:229:51: warning: suggest parentheses around ‘-’ inside ‘>>’ [-Wparentheses]
array[i]=(T) (value >> elementSize-bitsWritten-tBits);
~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
fastBMA.hpp:235:29: warning: suggest parentheses around ‘-’ inside ‘>>’ [-Wparentheses]
mask= ones >> elementSize-bitsWritten;
~~~~~~~~~~~^~~~~~~~~~~~
fastBMA.hpp:236:36: warning: suggest parentheses around arithmetic in operand of ‘|’ [-Wparentheses]
array[endIndex]=array[endIndex] & mask | (T) (value << (tBits-(elementSize-bitsWritten)));
~~~~~~~~~~~~~~~~^~~~~~
g++ -std=gnu++11 -shared -L/home/biocbuild/bbs-3.10-bioc/R/lib -L/usr/local/lib -o networkBMA.so MurmurHash3.o RcppExports.o ScanBMA_full.o fastBMAR.o -L/home/biocbuild/bbs-3.10-bioc/R/lib -lRlapack -L/home/biocbuild/bbs-3.10-bioc/R/lib -lRblas -lgfortran -lm -lquadmath -L/home/biocbuild/bbs-3.10-bioc/R/lib -lR
installing to /home/biocbuild/bbs-3.10-bioc/R/library/00LOCK-networkBMA/00new/networkBMA/libs
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (networkBMA)