Gro Nilsen
| Snapshot Date: 2020-04-14 16:46:13 -0400 (Tue, 14 Apr 2020) |
| URL: https://git.bioconductor.org/packages/copynumber |
| Branch: RELEASE_3_10 |
| Last Commit: c3a9594 |
| Last Changed Date: 2019-10-29 13:08:38 -0400 (Tue, 29 Oct 2019) |
| Back to Multiple platform build/check report for BioC 3.10 |
|
This page was generated on 2020-04-15 12:21:34 -0400 (Wed, 15 Apr 2020).
| Package 360/1823 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| copynumber 1.26.0 Gro Nilsen
| malbec1 | Linux (Ubuntu 18.04.4 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | OK | OK | | ||||||
| merida1 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | |
| Package: copynumber |
| Version: 1.26.0 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.10/bioc/src/contrib/copynumber_1.26.0.tar.gz && rm -rf copynumber.buildbin-libdir && mkdir copynumber.buildbin-libdir && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=copynumber.buildbin-libdir copynumber_1.26.0.tar.gz && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL copynumber_1.26.0.zip && rm copynumber_1.26.0.tar.gz copynumber_1.26.0.zip |
| StartedAt: 2020-04-14 19:30:13 -0400 (Tue, 14 Apr 2020) |
| EndedAt: 2020-04-14 19:31:04 -0400 (Tue, 14 Apr 2020) |
| EllapsedTime: 50.7 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.10/bioc/src/contrib/copynumber_1.26.0.tar.gz && rm -rf copynumber.buildbin-libdir && mkdir copynumber.buildbin-libdir && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=copynumber.buildbin-libdir copynumber_1.26.0.tar.gz && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL copynumber_1.26.0.zip && rm copynumber_1.26.0.tar.gz copynumber_1.26.0.zip
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install for i386
* installing *source* package 'copynumber' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'copynumber'
finding HTML links ... done
SNPdata html
aspcf html
callAberrations html
getGRangesFormat html
imputeMissing html
interpolate.pcf html
lymphoma html
micma html
multipcf html
pcf html
pcfPlain html
plotAberration html
plotAllele html
plotChrom html
plotCircle html
plotFreq html
plotGamma html
plotGenome html
plotHeatmap html
plotSample html
selectSegments html
subsetData html
subsetSegments html
winsorize html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'copynumber' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'copynumber' as copynumber_1.26.0.zip
* DONE (copynumber)
* installing to library 'C:/Users/biocbuild/bbs-3.10-bioc/R/library'
package 'copynumber' successfully unpacked and MD5 sums checked