Martin Morgan
| Snapshot Date: 2020-04-14 16:46:13 -0400 (Tue, 14 Apr 2020) |
| URL: https://git.bioconductor.org/packages/RaggedExperiment |
| Branch: RELEASE_3_10 |
| Last Commit: 79c03c8 |
| Last Changed Date: 2019-10-29 13:10:22 -0400 (Tue, 29 Oct 2019) |
| Back to Multiple platform build/check report for BioC 3.10 |
|
This page was generated on 2020-04-15 12:28:17 -0400 (Wed, 15 Apr 2020).
| Package 1361/1823 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| RaggedExperiment 1.10.0 Martin Morgan
| malbec1 | Linux (Ubuntu 18.04.4 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | OK | OK | WARNINGS | [ OK ] | | ||||||
| merida1 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | |
| Package: RaggedExperiment |
| Version: 1.10.0 |
| Command: rm -rf RaggedExperiment.buildbin-libdir && mkdir RaggedExperiment.buildbin-libdir && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=RaggedExperiment.buildbin-libdir RaggedExperiment_1.10.0.tar.gz |
| StartedAt: 2020-04-15 09:28:41 -0400 (Wed, 15 Apr 2020) |
| EndedAt: 2020-04-15 09:29:36 -0400 (Wed, 15 Apr 2020) |
| EllapsedTime: 55.6 seconds |
| RetCode: 0 |
| Status: OK |
| PackageFile: RaggedExperiment_1.10.0.zip |
| PackageFileSize: 906.7 KiB |
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### Running command:
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### rm -rf RaggedExperiment.buildbin-libdir && mkdir RaggedExperiment.buildbin-libdir && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=RaggedExperiment.buildbin-libdir RaggedExperiment_1.10.0.tar.gz
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install for i386
* installing *source* package 'RaggedExperiment' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'RaggedExperiment'
finding HTML links ... done
RaggedExperiment-class html
finding level-2 HTML links ... done
Rd warning: C:/Users/biocbuild/bbs-3.10-bioc/tmpdir/RtmpI7xkIV/R.INSTALL3bf835691ac9/RaggedExperiment/man/RaggedExperiment-class.Rd:107: file link 'GRanges' in package 'GenomicRanges' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.10-bioc/tmpdir/RtmpI7xkIV/R.INSTALL3bf835691ac9/RaggedExperiment/man/RaggedExperiment-class.Rd:131: file link 'GRangesList' in package 'GenomicRanges' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.10-bioc/tmpdir/RtmpI7xkIV/R.INSTALL3bf835691ac9/RaggedExperiment/man/RaggedExperiment-class.Rd:132: file link 'GAlignmentPairs' in package 'GenomicAlignments' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.10-bioc/tmpdir/RtmpI7xkIV/R.INSTALL3bf835691ac9/RaggedExperiment/man/RaggedExperiment-class.Rd:133: file link 'GAlignmentsList' in package 'GenomicAlignments' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.10-bioc/tmpdir/RtmpI7xkIV/R.INSTALL3bf835691ac9/RaggedExperiment/man/RaggedExperiment-class.Rd:142: file link 'GRangesList' in package 'GenomicRanges' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.10-bioc/tmpdir/RtmpI7xkIV/R.INSTALL3bf835691ac9/RaggedExperiment/man/RaggedExperiment-class.Rd:144: file link 'exonsBy' in package 'GenomicFeatures' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.10-bioc/tmpdir/RtmpI7xkIV/R.INSTALL3bf835691ac9/RaggedExperiment/man/RaggedExperiment-class.Rd:157: file link 'GRangesList' in package 'GenomicRanges' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.10-bioc/tmpdir/RtmpI7xkIV/R.INSTALL3bf835691ac9/RaggedExperiment/man/RaggedExperiment-class.Rd:162: file link 'GRanges' in package 'GenomicRanges' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.10-bioc/tmpdir/RtmpI7xkIV/R.INSTALL3bf835691ac9/RaggedExperiment/man/RaggedExperiment-class.Rd:163: file link 'GAlignments' in package 'GenomicAlignments' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.10-bioc/tmpdir/RtmpI7xkIV/R.INSTALL3bf835691ac9/RaggedExperiment/man/RaggedExperiment-class.Rd:172: file link 'DataFrame' in package 'S4Vectors' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.10-bioc/tmpdir/RtmpI7xkIV/R.INSTALL3bf835691ac9/RaggedExperiment/man/RaggedExperiment-class.Rd:405: file link 'SimpleList' in package 'S4Vectors' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.10-bioc/tmpdir/RtmpI7xkIV/R.INSTALL3bf835691ac9/RaggedExperiment/man/RaggedExperiment-class.Rd:419: file link 'DataFrame' in package 'S4Vectors' does not exist and so has been treated as a topic
RaggedExperiment-package html
assay-functions html
coerce-functions html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'RaggedExperiment' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'RaggedExperiment' as RaggedExperiment_1.10.0.zip
* DONE (RaggedExperiment)