tingting zhai
| Snapshot Date: 2020-04-14 16:46:13 -0400 (Tue, 14 Apr 2020) |
| URL: https://git.bioconductor.org/packages/NanoStringDiff |
| Branch: RELEASE_3_10 |
| Last Commit: 1f10952 |
| Last Changed Date: 2019-10-29 13:09:22 -0400 (Tue, 29 Oct 2019) |
| Back to Multiple platform build/check report for BioC 3.10 |
|
This page was generated on 2020-04-15 12:25:19 -0400 (Wed, 15 Apr 2020).
| Package 1130/1823 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| NanoStringDiff 1.16.0 tingting zhai
| malbec1 | Linux (Ubuntu 18.04.4 LTS) / x86_64 | OK | OK | WARNINGS | | ||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | WARNINGS | OK | | ||||||
| merida1 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | WARNINGS | OK | |
| Package: NanoStringDiff |
| Version: 1.16.0 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.10/bioc/src/contrib/NanoStringDiff_1.16.0.tar.gz && rm -rf NanoStringDiff.buildbin-libdir && mkdir NanoStringDiff.buildbin-libdir && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=NanoStringDiff.buildbin-libdir NanoStringDiff_1.16.0.tar.gz && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL NanoStringDiff_1.16.0.zip && rm NanoStringDiff_1.16.0.tar.gz NanoStringDiff_1.16.0.zip |
| StartedAt: 2020-04-14 18:38:45 -0400 (Tue, 14 Apr 2020) |
| EndedAt: 2020-04-14 18:40:06 -0400 (Tue, 14 Apr 2020) |
| EllapsedTime: 81.5 seconds |
| RetCode: 0 |
| Status: OK |
##############################################################################
##############################################################################
###
### Running command:
###
### C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.10/bioc/src/contrib/NanoStringDiff_1.16.0.tar.gz && rm -rf NanoStringDiff.buildbin-libdir && mkdir NanoStringDiff.buildbin-libdir && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=NanoStringDiff.buildbin-libdir NanoStringDiff_1.16.0.tar.gz && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL NanoStringDiff_1.16.0.zip && rm NanoStringDiff_1.16.0.tar.gz NanoStringDiff_1.16.0.zip
###
##############################################################################
##############################################################################
% Total % Received % Xferd Average Speed Time Time Time Current
Dload Upload Total Spent Left Speed
0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
100 314k 100 314k 0 0 7342k 0 --:--:-- --:--:-- --:--:-- 8058k
install for i386
* installing *source* package 'NanoStringDiff' ...
** using staged installation
** libs
C:/Rtools/mingw_32/bin/g++ -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.10-/R/include" -DNDEBUG -I"C:/Users/biocbuild/bbs-3.10-bioc/R/library/Rcpp/include" -I"C:/extsoft/include" -O2 -Wall -mtune=core2 -c RcppExports.cpp -o RcppExports.o
C:/Rtools/mingw_32/bin/g++ -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.10-/R/include" -DNDEBUG -I"C:/Users/biocbuild/bbs-3.10-bioc/R/library/Rcpp/include" -I"C:/extsoft/include" -O2 -Wall -mtune=core2 -c fun5.cpp -o fun5.o
C:/Rtools/mingw_32/bin/g++ -std=gnu++11 -shared -s -static-libgcc -o NanoStringDiff.dll tmp.def RcppExports.o fun5.o -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.10-/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.10-bioc/meat/NanoStringDiff.buildbin-libdir/00LOCK-NanoStringDiff/00new/NanoStringDiff/libs/i386
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'NanoStringDiff'
finding HTML links ... done
NanoStringData html
NanoStringDataNormalization html
NanoStringDiff-class html
NanoStringDiff-package html
PlotsPositiveHousekeeping html
estNormalizationFactors html
glm.LRT html
housekeepingControl html
housekeepingFactor html
negativeControl html
negativeFactor html
positiveControl html
positiveFactor html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'NanoStringDiff' ...
** libs
C:/Rtools/mingw_64/bin/g++ -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.10-/R/include" -DNDEBUG -I"C:/Users/biocbuild/bbs-3.10-bioc/R/library/Rcpp/include" -I"C:/extsoft/include" -O2 -Wall -mtune=core2 -c RcppExports.cpp -o RcppExports.o
C:/Rtools/mingw_64/bin/g++ -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.10-/R/include" -DNDEBUG -I"C:/Users/biocbuild/bbs-3.10-bioc/R/library/Rcpp/include" -I"C:/extsoft/include" -O2 -Wall -mtune=core2 -c fun5.cpp -o fun5.o
C:/Rtools/mingw_64/bin/g++ -std=gnu++11 -shared -s -static-libgcc -o NanoStringDiff.dll tmp.def RcppExports.o fun5.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.10-/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.10-bioc/meat/NanoStringDiff.buildbin-libdir/NanoStringDiff/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'NanoStringDiff' as NanoStringDiff_1.16.0.zip
* DONE (NanoStringDiff)
* installing to library 'C:/Users/biocbuild/bbs-3.10-bioc/R/library'
package 'NanoStringDiff' successfully unpacked and MD5 sums checked