Package: tweeDEseqCountData

Version: 1.0.5

Command: /home/biocbuild/bbs-2.9-bioc/R/bin/R CMD check --no-vignettes --timings tweeDEseqCountData_1.0.5.tar.gz

StartedAt: 2012-03-23 14:12:45 -0700 (Fri, 23 Mar 2012)

EndedAt: 2012-03-23 14:13:14 -0700 (Fri, 23 Mar 2012)

EllapsedTime: 29.5 seconds

RetCode: 0

Status:  OK

CheckDir: tweeDEseqCountData.Rcheck

Warnings: 0

* using log directory ‘/loc/home/biocbuild/bbs-2.9-data-experiment/meat/tweeDEseqCountData.Rcheck’
* using R version 2.14.2 (2012-02-29)
* using platform: x86_64-unknown-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘tweeDEseqCountData/DESCRIPTION’ ... OK
* this is package ‘tweeDEseqCountData’ version ‘1.0.5’
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking whether package ‘tweeDEseqCountData’ can be installed ... OK
* checking installed package size ... NOTE
  installed size is 11.6Mb
  sub-directories of 1Mb or more:
    data  11.5Mb
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking examples ... OK
* checking PDF version of manual ... OK

* installing *source* package ‘tweeDEseqCountData’ ...
** R
** data
** preparing package for lazy loading
** help
*** installing help indices
** building package indices ...
** testing if installed package can be loaded

* DONE (tweeDEseqCountData)

name	user	system	elapsed
annotEnsembl63	0.684	0.024	0.709
cheung	0.624	0.008	0.634
genderGenes	0.000	0.004	0.002
hkGenes	0.004	0.000	0.003
montgomery	0.752	0.020	0.772
pickrell	1.096	0.032	1.134