qtbase 1.0.0 Michael Lawrence
Snapshot Date: 2012-03-02 18:22:01 -0800 (Fri, 02 Mar 2012) | URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_9/madman/Rpacks/qtbase | Last Changed Rev: 59920 / Revision: 63385 | Last Changed Date: 2011-10-31 15:59:03 -0700 (Mon, 31 Oct 2011) |
| wilson2 | Linux (openSUSE 11.4) / x86_64 | OK | WARNINGS | |
moscato1 | Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64 | N O T S U P P O R T E D |
pitt | Mac OS X Leopard (10.5.8) / i386 | OK | WARNINGS | [ OK ] |
>>>>>>>
>>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=qtbase.buildbin-libdir qtbase_1.0.0.tar.gz'
>>>>>>>
* installing *source* package 'qtbase' ...
rm -rf ../kdebindings-build
rm -rf ../src-build
rm -rf ../inst/local
** libs
** arch - i386
mkdir -p ../kdebindings-build;
cd ../kdebindings-build; \
cmake ../kdebindings -DCMAKE_INSTALL_PREFIX=../inst/local; \
LD_LIBRARY_PATH=../../generator/bin make install
-- The C compiler identification is GNU
-- The CXX compiler identification is GNU
-- Checking whether C compiler has -isysroot
-- Checking whether C compiler has -isysroot - yes
-- Checking whether C compiler supports OSX deployment target flag
-- Checking whether C compiler supports OSX deployment target flag - yes
-- Check for working C compiler: /usr/bin/gcc
-- Check for working C compiler: /usr/bin/gcc -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Checking whether CXX compiler has -isysroot
-- Checking whether CXX compiler has -isysroot - yes
-- Checking whether CXX compiler supports OSX deployment target flag
-- Checking whether CXX compiler supports OSX deployment target flag - yes
-- Check for working CXX compiler: /usr/bin/c++
-- Check for working CXX compiler: /usr/bin/c++ -- works
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Looking for Q_WS_X11
-- Looking for Q_WS_X11 - not found.
-- Looking for Q_WS_WIN
-- Looking for Q_WS_WIN - not found.
-- Looking for Q_WS_QWS
-- Looking for Q_WS_QWS - not found.
-- Looking for Q_WS_MAC
-- Looking for Q_WS_MAC - found
-- Looking for QT_MAC_USE_COCOA
-- Looking for QT_MAC_USE_COCOA - found
-- Found Qt4: /usr/bin/qmake (found suitable version "4.7.0", required is "4.0.0")
-- Could NOT find Qt4 (missing: QT_QTUITOOLS_INCLUDE_DIR) (found suitable version "4.7.0", required is "4.0.0")
-- Found Perl: /usr/bin/perl
-- Checking how Qt was built...
-- Threshold is set to 15
-- QT_NO_DEBUG *Undefined*
-- QT_NO_ACCESSIBILITY [Defined]
-- QT_NO_STYLE_PLASTIQUE *Undefined*
-- QT_NO_STYLE_WINDOWSXP [Defined]
-- QT_NO_STYLE_WINDOWS *Undefined*
-- QT_NO_STYLE_MAC [Defined]
-- QT_NO_STYLE_CLEANLOOKS *Undefined*
-- QT_NO_TABLEVIEW *Undefined*
-- QT_OPENGL_LIB [Defined]
-- QT_DECLARATIVE_LIB [Defined]
-- QT_SCRIPT_LIB [Defined]
-- QT_SVG_LIB [Defined]
-- QT_HELP_LIB [Defined]
-- QT_WEBKIT_LIB [Defined]
-- QT_MULTIMEDIA_LIB [Defined]
-- QT_GUI_LIB [Defined]
-- QT_TEST_LIB [Defined]
-- QT_DBUS_LIB [Defined]
-- QT_XML_LIB [Defined]
-- QT_SQL_LIB [Defined]
-- QT_XMLPATTERNS_LIB [Defined]
-- QT_NETWORK_LIB [Defined]
-- QT_CORE_LIB [Defined]
-- Build Smoke... yes - Qt
-- Configuring done
-- Generating done
-- Build files have been written to: /tmp/RtmpBxWtn8/R.INSTALL54144e7df852/qtbase/kdebindings-build
Scanning dependencies of target cppparser
[ 1%] Building CXX object generator/parser/CMakeFiles/cppparser.dir/ast.cpp.o
[ 3%] Building CXX object generator/parser/CMakeFiles/cppparser.dir/default_visitor.cpp.o
[ 4%] Building CXX object generator/parser/CMakeFiles/cppparser.dir/memorypool.cpp.o
[ 6%] Building CXX object generator/parser/CMakeFiles/cppparser.dir/visitor.cpp.o
[ 8%] Building CXX object generator/parser/CMakeFiles/cppparser.dir/control.cpp.o
[ 9%] Building CXX object generator/parser/CMakeFiles/cppparser.dir/lexer.cpp.o
[ 11%] Building CXX object generator/parser/CMakeFiles/cppparser.dir/parser.cpp.o
/tmp/RtmpBxWtn8/R.INSTALL54144e7df852/qtbase/kdebindings/generator/parser/parser.cpp:1036:2: warning: #warning "implement me"
/tmp/RtmpBxWtn8/R.INSTALL54144e7df852/qtbase/kdebindings/generator/parser/parser.cpp:2604:2: warning: #warning "implemente me (AST)"
/tmp/RtmpBxWtn8/R.INSTALL54144e7df852/qtbase/kdebindings/generator/parser/parser.cpp:3490:2: warning: #warning "mark the ast as constant"
[ 13%] Building CXX object generator/parser/CMakeFiles/cppparser.dir/listnode.cpp.o
[ 14%] Building CXX object generator/parser/CMakeFiles/cppparser.dir/tokens.cpp.o
[ 16%] Building CXX object generator/parser/CMakeFiles/cppparser.dir/dumptree.cpp.o
[ 18%] Building CXX object generator/parser/CMakeFiles/cppparser.dir/parsesession.cpp.o
/tmp/RtmpBxWtn8/R.INSTALL54144e7df852/qtbase/kdebindings/generator/parser/parsesession.cpp: In destructor 'ParseSession::˜ParseSession()':
/tmp/RtmpBxWtn8/R.INSTALL54144e7df852/qtbase/kdebindings/generator/parser/parsesession.cpp:42: warning: possible problem detected in invocation of delete operator:
/tmp/RtmpBxWtn8/R.INSTALL54144e7df852/qtbase/kdebindings/generator/parser/parsesession.cpp:42: warning: invalid use of incomplete type 'struct rpp::MacroBlock'
/tmp/RtmpBxWtn8/R.INSTALL54144e7df852/qtbase/kdebindings/generator/parser/parsesession.h:43: warning: forward declaration of 'struct rpp::MacroBlock'
/tmp/RtmpBxWtn8/R.INSTALL54144e7df852/qtbase/kdebindings/generator/parser/parsesession.cpp:42: note: neither the destructor nor the class-specific operator delete will be called, even if they are declared when the class is defined.
[ 19%] Building CXX object generator/parser/CMakeFiles/cppparser.dir/commentparser.cpp.o
[ 21%] Building CXX object generator/parser/CMakeFiles/cppparser.dir/commentformatter.cpp.o
[ 22%] Building CXX object generator/parser/CMakeFiles/cppparser.dir/codegenerator.cpp.o
[ 24%] Building CXX object generator/parser/CMakeFiles/cppparser.dir/indexedstring.cpp.o
[ 26%] Building CXX object generator/parser/CMakeFiles/cppparser.dir/stringhelpers.cpp.o
[ 27%] Building CXX object generator/parser/CMakeFiles/cppparser.dir/rpp/pp-stream.cpp.o
[ 29%] Building CXX object generator/parser/CMakeFiles/cppparser.dir/rpp/pp-macro-expander.cpp.o
[ 31%] Building CXX object generator/parser/CMakeFiles/cppparser.dir/rpp/pp-scanner.cpp.o
[ 32%] Building CXX object generator/parser/CMakeFiles/cppparser.dir/rpp/pp-macro.cpp.o
[ 34%] Building CXX object generator/parser/CMakeFiles/cppparser.dir/rpp/pp-engine.cpp.o
[ 36%] Building CXX object generator/parser/CMakeFiles/cppparser.dir/rpp/pp-internal.cpp.o
[ 37%] Building CXX object generator/parser/CMakeFiles/cppparser.dir/rpp/pp-environment.cpp.o
[ 39%] Building CXX object generator/parser/CMakeFiles/cppparser.dir/rpp/pp-location.cpp.o
[ 40%] Building CXX object generator/parser/CMakeFiles/cppparser.dir/rpp/preprocessor.cpp.o
[ 42%] Building CXX object generator/parser/CMakeFiles/cppparser.dir/rpp/chartools.cpp.o
Linking CXX shared library ../bin/libcppparser.dylib
[ 42%] Built target cppparser
Scanning dependencies of target smokegen
[ 44%] Building CXX object generator/CMakeFiles/smokegen.dir/main.cpp.o
[ 45%] Building CXX object generator/CMakeFiles/smokegen.dir/generatorenvironment.cpp.o
[ 47%] Building CXX object generator/CMakeFiles/smokegen.dir/generatorvisitor.cpp.o
[ 49%] Building CXX object generator/CMakeFiles/smokegen.dir/generatorpreprocessor.cpp.o
[ 50%] Building CXX object generator/CMakeFiles/smokegen.dir/options.cpp.o
[ 52%] Building CXX object generator/CMakeFiles/smokegen.dir/type_compiler.cpp.o
[ 54%] Building CXX object generator/CMakeFiles/smokegen.dir/name_compiler.cpp.o
/tmp/RtmpBxWtn8/R.INSTALL54144e7df852/qtbase/kdebindings/generator/name_compiler.cpp:139:2: warning: #warning "NameCompiler::visitUnqualifiedName() -- implement me"
[ 55%] Building CXX object generator/CMakeFiles/smokegen.dir/type.cpp.o
Linking CXX executable bin/smokegen
[ 55%] Built target smokegen
Scanning dependencies of target generator_smoke
[ 57%] Building CXX object generator/generators/smoke/CMakeFiles/generator_smoke.dir/generator_smoke.cpp.o
[ 59%] Building CXX object generator/generators/smoke/CMakeFiles/generator_smoke.dir/writeClasses.cpp.o
[ 60%] Building CXX object generator/generators/smoke/CMakeFiles/generator_smoke.dir/writeSmokeDataFile.cpp.o
[ 62%] Building CXX object generator/generators/smoke/CMakeFiles/generator_smoke.dir/helpers.cpp.o
Linking CXX shared module ../../bin/generator_smoke.so
[ 62%] Built target generator_smoke
Scanning dependencies of target generator_dump
[ 63%] Building CXX object generator/generators/dump/CMakeFiles/generator_dump.dir/generator_dump.cpp.o
Linking CXX shared module ../../bin/generator_dump.so
[ 63%] Built target generator_dump
[ 65%] Generating smokedata.cpp, x_1.cpp, x_2.cpp, x_3.cpp, x_4.cpp, x_5.cpp, x_6.cpp, x_7.cpp, x_8.cpp, x_9.cpp, x_10.cpp, x_11.cpp, x_12.cpp, x_13.cpp, x_14.cpp, x_15.cpp, x_16.cpp, x_17.cpp, x_18.cpp, x_19.cpp, x_20.cpp
using generator "/private/tmp/RtmpBxWtn8/R.INSTALL54144e7df852/qtbase/kdebindings-build/generator/bin/generator_smoke.so"
include directory "/Library/Frameworks/QtCore.framework;/Library/Frameworks/QtCore.framework" doesn't exist
parsing "/tmp/RtmpBxWtn8/R.INSTALL54144e7df852/qtbase/kdebindings/smoke/qt/qt_includes.h"
Generating SMOKE sources...
preparing SMOKE data [qt]
writing out smokedata.cpp [qt]
writing out x_*.cpp [qt]
Done.
Scanning dependencies of target smokeqt
[ 67%] Building CXX object smoke/qt/CMakeFiles/smokeqt.dir/smokedata.cpp.o
[ 68%] Building CXX object smoke/qt/CMakeFiles/smokeqt.dir/x_1.cpp.o
[ 70%] Building CXX object smoke/qt/CMakeFiles/smokeqt.dir/x_2.cpp.o
[ 72%] Building CXX object smoke/qt/CMakeFiles/smokeqt.dir/x_3.cpp.o
[ 73%] Building CXX object smoke/qt/CMakeFiles/smokeqt.dir/x_4.cpp.o
[ 75%] Building CXX object smoke/qt/CMakeFiles/smokeqt.dir/x_5.cpp.o
[ 77%] Building CXX object smoke/qt/CMakeFiles/smokeqt.dir/x_6.cpp.o
[ 78%] Building CXX object smoke/qt/CMakeFiles/smokeqt.dir/x_7.cpp.o
[ 80%] Building CXX object smoke/qt/CMakeFiles/smokeqt.dir/x_8.cpp.o
[ 81%] Building CXX object smoke/qt/CMakeFiles/smokeqt.dir/x_9.cpp.o
[ 83%] Building CXX object smoke/qt/CMakeFiles/smokeqt.dir/x_10.cpp.o
[ 85%] Building CXX object smoke/qt/CMakeFiles/smokeqt.dir/x_11.cpp.o
[ 86%] Building CXX object smoke/qt/CMakeFiles/smokeqt.dir/x_12.cpp.o
[ 88%] Building CXX object smoke/qt/CMakeFiles/smokeqt.dir/x_13.cpp.o
[ 90%] Building CXX object smoke/qt/CMakeFiles/smokeqt.dir/x_14.cpp.o
[ 91%] Building CXX object smoke/qt/CMakeFiles/smokeqt.dir/x_15.cpp.o
[ 93%] Building CXX object smoke/qt/CMakeFiles/smokeqt.dir/x_16.cpp.o
[ 95%] Building CXX object smoke/qt/CMakeFiles/smokeqt.dir/x_17.cpp.o
[ 96%] Building CXX object smoke/qt/CMakeFiles/smokeqt.dir/x_18.cpp.o
[ 98%] Building CXX object smoke/qt/CMakeFiles/smokeqt.dir/x_19.cpp.o
[100%] Building CXX object smoke/qt/CMakeFiles/smokeqt.dir/x_20.cpp.o
Linking CXX static library libsmokeqt.a
[100%] Built target smokeqt
Install the project...
-- Install configuration: ""
-- Installing: /tmp/RtmpBxWtn8/R.INSTALL54144e7df852/qtbase/inst/local/bin/smokegen
-- Installing: /tmp/RtmpBxWtn8/R.INSTALL54144e7df852/qtbase/inst/local/include/smokegen/generatorenvironment.h
-- Installing: /tmp/RtmpBxWtn8/R.INSTALL54144e7df852/qtbase/inst/local/include/smokegen/generator_export.h
-- Installing: /tmp/RtmpBxWtn8/R.INSTALL54144e7df852/qtbase/inst/local/include/smokegen/generatorpreprocessor.h
-- Installing: /tmp/RtmpBxWtn8/R.INSTALL54144e7df852/qtbase/inst/local/include/smokegen/generatorvisitor.h
-- Installing: /tmp/RtmpBxWtn8/R.INSTALL54144e7df852/qtbase/inst/local/include/smokegen/name_compiler.h
-- Installing: /tmp/RtmpBxWtn8/R.INSTALL54144e7df852/qtbase/inst/local/include/smokegen/options.h
-- Installing: /tmp/RtmpBxWtn8/R.INSTALL54144e7df852/qtbase/inst/local/include/smokegen/type_compiler.h
-- Installing: /tmp/RtmpBxWtn8/R.INSTALL54144e7df852/qtbase/inst/local/include/smokegen/type.h
-- Installing: /tmp/RtmpBxWtn8/R.INSTALL54144e7df852/qtbase/inst/local/lib/libcppparser.dylib
-- Installing: /tmp/RtmpBxWtn8/R.INSTALL54144e7df852/qtbase/inst/local/lib/smokegen/generator_smoke.so
-- Installing: /tmp/RtmpBxWtn8/R.INSTALL54144e7df852/qtbase/inst/local/lib/smokegen/generator_dump.so
-- Installing: /tmp/RtmpBxWtn8/R.INSTALL54144e7df852/qtbase/inst/local/include/smoke.h
-- Installing: /tmp/RtmpBxWtn8/R.INSTALL54144e7df852/qtbase/inst/local/include/smoke/qt_smoke.h
-- Installing: /tmp/RtmpBxWtn8/R.INSTALL54144e7df852/qtbase/inst/local/lib/libsmokeqt.a
-- Installing: /tmp/RtmpBxWtn8/R.INSTALL54144e7df852/qtbase/inst/local/share/kdebindings/qtdefines
-- Installing: /tmp/RtmpBxWtn8/R.INSTALL54144e7df852/qtbase/inst/local/share/kdebindings/config.xml
mkdir -p ../src-build;
cd ../src-build; \
cmake ../src \
-DR_LIBRARIES="-F/Library/Frameworks/R.framework/.. -framework R" \
-DR_INCLUDES=/Library/Frameworks/R.framework/Resources/include \
-DCMAKE_INSTALL_PREFIX=../src; \
make install
-- The C compiler identification is GNU
-- The CXX compiler identification is GNU
-- Checking whether C compiler has -isysroot
-- Checking whether C compiler has -isysroot - yes
-- Checking whether C compiler supports OSX deployment target flag
-- Checking whether C compiler supports OSX deployment target flag - yes
-- Check for working C compiler: /usr/bin/gcc
-- Check for working C compiler: /usr/bin/gcc -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Checking whether CXX compiler has -isysroot
-- Checking whether CXX compiler has -isysroot - yes
-- Checking whether CXX compiler supports OSX deployment target flag
-- Checking whether CXX compiler supports OSX deployment target flag - yes
-- Check for working CXX compiler: /usr/bin/c++
-- Check for working CXX compiler: /usr/bin/c++ -- works
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Looking for Q_WS_X11
-- Looking for Q_WS_X11 - not found.
-- Looking for Q_WS_WIN
-- Looking for Q_WS_WIN - not found.
-- Looking for Q_WS_QWS
-- Looking for Q_WS_QWS - not found.
-- Looking for Q_WS_MAC
-- Looking for Q_WS_MAC - found
-- Looking for QT_MAC_USE_COCOA
-- Looking for QT_MAC_USE_COCOA - found
-- Found Qt4: /usr/bin/qmake (found suitable version "4.7.0", required is "4.0.0")
-- Could NOT find Qt4 (missing: QT_QTUITOOLS_INCLUDE_DIR) (found suitable version "4.7.0", required is "4.0.0")
-- Configuring done
-- Generating done
-- Build files have been written to: /tmp/RtmpBxWtn8/R.INSTALL54144e7df852/qtbase/src-build
[ 2%] Generating moc_EventLoop.cxx
Scanning dependencies of target qtbase
[ 5%] Building CXX object CMakeFiles/qtbase.dir/init.cpp.o
[ 7%] Building CXX object CMakeFiles/qtbase.dir/EventLoop.cpp.o
/tmp/RtmpBxWtn8/R.INSTALL54144e7df852/qtbase/src/EventLoop.cpp:23: warning: deprecated conversion from string constant to 'char*'
/tmp/RtmpBxWtn8/R.INSTALL54144e7df852/qtbase/src/EventLoop.cpp:23: warning: deprecated conversion from string constant to 'char*'
[ 10%] Building CXX object CMakeFiles/qtbase.dir/convert.cpp.o
[ 13%] Building CXX object CMakeFiles/qtbase.dir/wrap.cpp.o
[ 15%] Building CXX object CMakeFiles/qtbase.dir/metaobject.cpp.o
[ 18%] Building CXX object CMakeFiles/qtbase.dir/connect.cpp.o
[ 21%] Building CXX object CMakeFiles/qtbase.dir/invoke.cpp.o
[ 23%] Building CXX object CMakeFiles/qtbase.dir/dynamicqobject.cpp.o
[ 26%] Building CXX object CMakeFiles/qtbase.dir/RDynamicQObject.cpp.o
[ 28%] Building CXX object CMakeFiles/qtbase.dir/ClassFactory.cpp.o
[ 31%] Building CXX object CMakeFiles/qtbase.dir/Class.cpp.o
[ 34%] Building CXX object CMakeFiles/qtbase.dir/SmokeClass.cpp.o
[ 36%] Building CXX object CMakeFiles/qtbase.dir/MocClass.cpp.o
[ 39%] Building CXX object CMakeFiles/qtbase.dir/RClass.cpp.o
[ 42%] Building CXX object CMakeFiles/qtbase.dir/classes.cpp.o
[ 44%] Building CXX object CMakeFiles/qtbase.dir/ForeignMethod.cpp.o
[ 47%] Building CXX object CMakeFiles/qtbase.dir/SmokeMethod.cpp.o
[ 50%] Building CXX object CMakeFiles/qtbase.dir/RMethod.cpp.o
[ 52%] Building CXX object CMakeFiles/qtbase.dir/MocMethod.cpp.o
[ 55%] Building CXX object CMakeFiles/qtbase.dir/DynamicBinding.cpp.o
[ 57%] Building CXX object CMakeFiles/qtbase.dir/MocDynamicBinding.cpp.o
[ 60%] Building CXX object CMakeFiles/qtbase.dir/MethodCall.cpp.o
[ 63%] Building CXX object CMakeFiles/qtbase.dir/type-handlers.cpp.o
[ 65%] Building CXX object CMakeFiles/qtbase.dir/MocStack.cpp.o
[ 68%] Building CXX object CMakeFiles/qtbase.dir/MocProperty.cpp.o
[ 71%] Building CXX object CMakeFiles/qtbase.dir/RProperty.cpp.o
[ 73%] Building CXX object CMakeFiles/qtbase.dir/SmokeModule.cpp.o
[ 76%] Building CXX object CMakeFiles/qtbase.dir/module.cpp.o
[ 78%] Building CXX object CMakeFiles/qtbase.dir/RSmokeBinding.cpp.o
[ 81%] Building CXX object CMakeFiles/qtbase.dir/SmokeList.cpp.o
[ 84%] Building CXX object CMakeFiles/qtbase.dir/SmokeObject.cpp.o
[ 86%] Building CXX object CMakeFiles/qtbase.dir/ObjectTable.cpp.o
[ 89%] Building CXX object CMakeFiles/qtbase.dir/InstanceObjectTable.cpp.o
[ 92%] Building CXX object CMakeFiles/qtbase.dir/smoke.cpp.o
[ 94%] Building CXX object CMakeFiles/qtbase.dir/DataFrameModel.cpp.o
[ 97%] Building CXX object CMakeFiles/qtbase.dir/RTextFormattingDelegate.cpp.o
[100%] Building CXX object CMakeFiles/qtbase.dir/moc_EventLoop.cxx.o
Linking CXX shared library qtbase.so
[100%] Built target qtbase
Install the project...
-- Install configuration: ""
-- Installing: /tmp/RtmpBxWtn8/R.INSTALL54144e7df852/qtbase/src/./qtbase.so
installing to /Users/biocbuild/bbs-2.9-bioc/meat/qtbase.buildbin-libdir/qtbase/libs/i386
** R
** demo
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices ...
*** tangling vignette sources ...
'qtbase.Rnw'
** testing if installed package can be loaded
_RegisterApplication(), FAILED TO establish the default connection to the WindowServer, _CGSDefaultConnection() is NULL.
* DONE (qtbase)
>>>>>>>
>>>>>>> FIXING LINKS FOR qtbase.buildbin-libdir/qtbase/libs/i386/qtbase.so
>>>>>>>
install_name_tool -change "/usr/local/lib/libgcc_s.1.dylib" "/Library/Frameworks/R.framework/Versions/2.14/Resources/lib/libgcc_s.1.dylib" "qtbase.buildbin-libdir/qtbase/libs/i386/qtbase.so"
install_name_tool -change "/usr/local/lib/libgfortran.2.dylib" "/Library/Frameworks/R.framework/Versions/2.14/Resources/lib/libgfortran.2.dylib" "qtbase.buildbin-libdir/qtbase/libs/i386/qtbase.so"
install_name_tool -change "/usr/local/lib/libreadline.5.2.dylib" "/Library/Frameworks/R.framework/Versions/2.14/Resources/lib/libreadline.5.2.dylib" "qtbase.buildbin-libdir/qtbase/libs/i386/qtbase.so"
install_name_tool -change "/usr/local/lib/libreadline.dylib" "/Library/Frameworks/R.framework/Versions/2.14/Resources/lib/libreadline.dylib" "qtbase.buildbin-libdir/qtbase/libs/i386/qtbase.so"
>>>>>>>
>>>>>>> INSTALLATION OF ppc LIBS WITH 'R_ARCH=/ppc R CMD INSTALL --preclean --no-multiarch --no-test-load --library=qtbase.buildbin-libdir --libs-only qtbase_1.0.0.tar.gz'
>>>>>>>
* installing *source* package 'qtbase' ...
rm -rf ../kdebindings-build
rm -rf ../src-build
rm -rf ../inst/local
** libs
** arch - ppc
mkdir -p ../kdebindings-build;
cd ../kdebindings-build; \
cmake ../kdebindings -DCMAKE_INSTALL_PREFIX=../inst/local; \
LD_LIBRARY_PATH=../../generator/bin make install
-- The C compiler identification is GNU
-- The CXX compiler identification is GNU
-- Checking whether C compiler has -isysroot
-- Checking whether C compiler has -isysroot - yes
-- Checking whether C compiler supports OSX deployment target flag
-- Checking whether C compiler supports OSX deployment target flag - yes
-- Check for working C compiler: /usr/bin/gcc
-- Check for working C compiler: /usr/bin/gcc -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Checking whether CXX compiler has -isysroot
-- Checking whether CXX compiler has -isysroot - yes
-- Checking whether CXX compiler supports OSX deployment target flag
-- Checking whether CXX compiler supports OSX deployment target flag - yes
-- Check for working CXX compiler: /usr/bin/c++
-- Check for working CXX compiler: /usr/bin/c++ -- works
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Looking for Q_WS_X11
-- Looking for Q_WS_X11 - not found.
-- Looking for Q_WS_WIN
-- Looking for Q_WS_WIN - not found.
-- Looking for Q_WS_QWS
-- Looking for Q_WS_QWS - not found.
-- Looking for Q_WS_MAC
-- Looking for Q_WS_MAC - found
-- Looking for QT_MAC_USE_COCOA
-- Looking for QT_MAC_USE_COCOA - found
-- Found Qt4: /usr/bin/qmake (found suitable version "4.7.0", required is "4.0.0")
-- Could NOT find Qt4 (missing: QT_QTUITOOLS_INCLUDE_DIR) (found suitable version "4.7.0", required is "4.0.0")
-- Found Perl: /usr/bin/perl
-- Checking how Qt was built...
-- Threshold is set to 15
-- QT_NO_DEBUG *Undefined*
-- QT_NO_ACCESSIBILITY [Defined]
-- QT_NO_STYLE_PLASTIQUE *Undefined*
-- QT_NO_STYLE_WINDOWSXP [Defined]
-- QT_NO_STYLE_WINDOWS *Undefined*
-- QT_NO_STYLE_MAC [Defined]
-- QT_NO_STYLE_CLEANLOOKS *Undefined*
-- QT_NO_TABLEVIEW *Undefined*
-- QT_OPENGL_LIB [Defined]
-- QT_DECLARATIVE_LIB [Defined]
-- QT_SCRIPT_LIB [Defined]
-- QT_SVG_LIB [Defined]
-- QT_HELP_LIB [Defined]
-- QT_WEBKIT_LIB [Defined]
-- QT_MULTIMEDIA_LIB [Defined]
-- QT_GUI_LIB [Defined]
-- QT_TEST_LIB [Defined]
-- QT_DBUS_LIB [Defined]
-- QT_XML_LIB [Defined]
-- QT_SQL_LIB [Defined]
-- QT_XMLPATTERNS_LIB [Defined]
-- QT_NETWORK_LIB [Defined]
-- QT_CORE_LIB [Defined]
-- Build Smoke... yes - Qt
-- Configuring done
-- Generating done
-- Build files have been written to: /tmp/RtmpazUzr0/R.INSTALL862129db9f4f/qtbase/kdebindings-build
Scanning dependencies of target cppparser
[ 1%] Building CXX object generator/parser/CMakeFiles/cppparser.dir/ast.cpp.o
[ 3%] Building CXX object generator/parser/CMakeFiles/cppparser.dir/default_visitor.cpp.o
[ 4%] Building CXX object generator/parser/CMakeFiles/cppparser.dir/memorypool.cpp.o
[ 6%] Building CXX object generator/parser/CMakeFiles/cppparser.dir/visitor.cpp.o
[ 8%] Building CXX object generator/parser/CMakeFiles/cppparser.dir/control.cpp.o
[ 9%] Building CXX object generator/parser/CMakeFiles/cppparser.dir/lexer.cpp.o
[ 11%] Building CXX object generator/parser/CMakeFiles/cppparser.dir/parser.cpp.o
/tmp/RtmpazUzr0/R.INSTALL862129db9f4f/qtbase/kdebindings/generator/parser/parser.cpp:1036:2: warning: #warning "implement me"
/tmp/RtmpazUzr0/R.INSTALL862129db9f4f/qtbase/kdebindings/generator/parser/parser.cpp:2604:2: warning: #warning "implemente me (AST)"
/tmp/RtmpazUzr0/R.INSTALL862129db9f4f/qtbase/kdebindings/generator/parser/parser.cpp:3490:2: warning: #warning "mark the ast as constant"
[ 13%] Building CXX object generator/parser/CMakeFiles/cppparser.dir/listnode.cpp.o
[ 14%] Building CXX object generator/parser/CMakeFiles/cppparser.dir/tokens.cpp.o
[ 16%] Building CXX object generator/parser/CMakeFiles/cppparser.dir/dumptree.cpp.o
[ 18%] Building CXX object generator/parser/CMakeFiles/cppparser.dir/parsesession.cpp.o
/tmp/RtmpazUzr0/R.INSTALL862129db9f4f/qtbase/kdebindings/generator/parser/parsesession.cpp: In destructor 'ParseSession::˜ParseSession()':
/tmp/RtmpazUzr0/R.INSTALL862129db9f4f/qtbase/kdebindings/generator/parser/parsesession.cpp:42: warning: possible problem detected in invocation of delete operator:
/tmp/RtmpazUzr0/R.INSTALL862129db9f4f/qtbase/kdebindings/generator/parser/parsesession.cpp:42: warning: invalid use of incomplete type 'struct rpp::MacroBlock'
/tmp/RtmpazUzr0/R.INSTALL862129db9f4f/qtbase/kdebindings/generator/parser/parsesession.h:43: warning: forward declaration of 'struct rpp::MacroBlock'
/tmp/RtmpazUzr0/R.INSTALL862129db9f4f/qtbase/kdebindings/generator/parser/parsesession.cpp:42: note: neither the destructor nor the class-specific operator delete will be called, even if they are declared when the class is defined.
[ 19%] Building CXX object generator/parser/CMakeFiles/cppparser.dir/commentparser.cpp.o
[ 21%] Building CXX object generator/parser/CMakeFiles/cppparser.dir/commentformatter.cpp.o
[ 22%] Building CXX object generator/parser/CMakeFiles/cppparser.dir/codegenerator.cpp.o
[ 24%] Building CXX object generator/parser/CMakeFiles/cppparser.dir/indexedstring.cpp.o
[ 26%] Building CXX object generator/parser/CMakeFiles/cppparser.dir/stringhelpers.cpp.o
[ 27%] Building CXX object generator/parser/CMakeFiles/cppparser.dir/rpp/pp-stream.cpp.o
[ 29%] Building CXX object generator/parser/CMakeFiles/cppparser.dir/rpp/pp-macro-expander.cpp.o
[ 31%] Building CXX object generator/parser/CMakeFiles/cppparser.dir/rpp/pp-scanner.cpp.o
[ 32%] Building CXX object generator/parser/CMakeFiles/cppparser.dir/rpp/pp-macro.cpp.o
[ 34%] Building CXX object generator/parser/CMakeFiles/cppparser.dir/rpp/pp-engine.cpp.o
[ 36%] Building CXX object generator/parser/CMakeFiles/cppparser.dir/rpp/pp-internal.cpp.o
[ 37%] Building CXX object generator/parser/CMakeFiles/cppparser.dir/rpp/pp-environment.cpp.o
[ 39%] Building CXX object generator/parser/CMakeFiles/cppparser.dir/rpp/pp-location.cpp.o
[ 40%] Building CXX object generator/parser/CMakeFiles/cppparser.dir/rpp/preprocessor.cpp.o
[ 42%] Building CXX object generator/parser/CMakeFiles/cppparser.dir/rpp/chartools.cpp.o
Linking CXX shared library ../bin/libcppparser.dylib
[ 42%] Built target cppparser
Scanning dependencies of target smokegen
[ 44%] Building CXX object generator/CMakeFiles/smokegen.dir/main.cpp.o
[ 45%] Building CXX object generator/CMakeFiles/smokegen.dir/generatorenvironment.cpp.o
[ 47%] Building CXX object generator/CMakeFiles/smokegen.dir/generatorvisitor.cpp.o
[ 49%] Building CXX object generator/CMakeFiles/smokegen.dir/generatorpreprocessor.cpp.o
[ 50%] Building CXX object generator/CMakeFiles/smokegen.dir/options.cpp.o
[ 52%] Building CXX object generator/CMakeFiles/smokegen.dir/type_compiler.cpp.o
[ 54%] Building CXX object generator/CMakeFiles/smokegen.dir/name_compiler.cpp.o
/tmp/RtmpazUzr0/R.INSTALL862129db9f4f/qtbase/kdebindings/generator/name_compiler.cpp:139:2: warning: #warning "NameCompiler::visitUnqualifiedName() -- implement me"
[ 55%] Building CXX object generator/CMakeFiles/smokegen.dir/type.cpp.o
Linking CXX executable bin/smokegen
[ 55%] Built target smokegen
Scanning dependencies of target generator_smoke
[ 57%] Building CXX object generator/generators/smoke/CMakeFiles/generator_smoke.dir/generator_smoke.cpp.o
[ 59%] Building CXX object generator/generators/smoke/CMakeFiles/generator_smoke.dir/writeClasses.cpp.o
[ 60%] Building CXX object generator/generators/smoke/CMakeFiles/generator_smoke.dir/writeSmokeDataFile.cpp.o
[ 62%] Building CXX object generator/generators/smoke/CMakeFiles/generator_smoke.dir/helpers.cpp.o
Linking CXX shared module ../../bin/generator_smoke.so
[ 62%] Built target generator_smoke
Scanning dependencies of target generator_dump
[ 63%] Building CXX object generator/generators/dump/CMakeFiles/generator_dump.dir/generator_dump.cpp.o
Linking CXX shared module ../../bin/generator_dump.so
[ 63%] Built target generator_dump
[ 65%] Generating smokedata.cpp, x_1.cpp, x_2.cpp, x_3.cpp, x_4.cpp, x_5.cpp, x_6.cpp, x_7.cpp, x_8.cpp, x_9.cpp, x_10.cpp, x_11.cpp, x_12.cpp, x_13.cpp, x_14.cpp, x_15.cpp, x_16.cpp, x_17.cpp, x_18.cpp, x_19.cpp, x_20.cpp
using generator "/private/tmp/RtmpazUzr0/R.INSTALL862129db9f4f/qtbase/kdebindings-build/generator/bin/generator_smoke.so"
include directory "/Library/Frameworks/QtCore.framework;/Library/Frameworks/QtCore.framework" doesn't exist
parsing "/tmp/RtmpazUzr0/R.INSTALL862129db9f4f/qtbase/kdebindings/smoke/qt/qt_includes.h"
Generating SMOKE sources...
preparing SMOKE data [qt]
writing out smokedata.cpp [qt]
writing out x_*.cpp [qt]
Done.
Scanning dependencies of target smokeqt
[ 67%] Building CXX object smoke/qt/CMakeFiles/smokeqt.dir/smokedata.cpp.o
[ 68%] Building CXX object smoke/qt/CMakeFiles/smokeqt.dir/x_1.cpp.o
[ 70%] Building CXX object smoke/qt/CMakeFiles/smokeqt.dir/x_2.cpp.o
[ 72%] Building CXX object smoke/qt/CMakeFiles/smokeqt.dir/x_3.cpp.o
[ 73%] Building CXX object smoke/qt/CMakeFiles/smokeqt.dir/x_4.cpp.o
[ 75%] Building CXX object smoke/qt/CMakeFiles/smokeqt.dir/x_5.cpp.o
[ 77%] Building CXX object smoke/qt/CMakeFiles/smokeqt.dir/x_6.cpp.o
[ 78%] Building CXX object smoke/qt/CMakeFiles/smokeqt.dir/x_7.cpp.o
[ 80%] Building CXX object smoke/qt/CMakeFiles/smokeqt.dir/x_8.cpp.o
[ 81%] Building CXX object smoke/qt/CMakeFiles/smokeqt.dir/x_9.cpp.o
[ 83%] Building CXX object smoke/qt/CMakeFiles/smokeqt.dir/x_10.cpp.o
[ 85%] Building CXX object smoke/qt/CMakeFiles/smokeqt.dir/x_11.cpp.o
[ 86%] Building CXX object smoke/qt/CMakeFiles/smokeqt.dir/x_12.cpp.o
[ 88%] Building CXX object smoke/qt/CMakeFiles/smokeqt.dir/x_13.cpp.o
[ 90%] Building CXX object smoke/qt/CMakeFiles/smokeqt.dir/x_14.cpp.o
[ 91%] Building CXX object smoke/qt/CMakeFiles/smokeqt.dir/x_15.cpp.o
[ 93%] Building CXX object smoke/qt/CMakeFiles/smokeqt.dir/x_16.cpp.o
[ 95%] Building CXX object smoke/qt/CMakeFiles/smokeqt.dir/x_17.cpp.o
[ 96%] Building CXX object smoke/qt/CMakeFiles/smokeqt.dir/x_18.cpp.o
[ 98%] Building CXX object smoke/qt/CMakeFiles/smokeqt.dir/x_19.cpp.o
[100%] Building CXX object smoke/qt/CMakeFiles/smokeqt.dir/x_20.cpp.o
Linking CXX static library libsmokeqt.a
[100%] Built target smokeqt
Install the project...
-- Install configuration: ""
-- Installing: /tmp/RtmpazUzr0/R.INSTALL862129db9f4f/qtbase/inst/local/bin/smokegen
-- Installing: /tmp/RtmpazUzr0/R.INSTALL862129db9f4f/qtbase/inst/local/include/smokegen/generatorenvironment.h
-- Installing: /tmp/RtmpazUzr0/R.INSTALL862129db9f4f/qtbase/inst/local/include/smokegen/generator_export.h
-- Installing: /tmp/RtmpazUzr0/R.INSTALL862129db9f4f/qtbase/inst/local/include/smokegen/generatorpreprocessor.h
-- Installing: /tmp/RtmpazUzr0/R.INSTALL862129db9f4f/qtbase/inst/local/include/smokegen/generatorvisitor.h
-- Installing: /tmp/RtmpazUzr0/R.INSTALL862129db9f4f/qtbase/inst/local/include/smokegen/name_compiler.h
-- Installing: /tmp/RtmpazUzr0/R.INSTALL862129db9f4f/qtbase/inst/local/include/smokegen/options.h
-- Installing: /tmp/RtmpazUzr0/R.INSTALL862129db9f4f/qtbase/inst/local/include/smokegen/type_compiler.h
-- Installing: /tmp/RtmpazUzr0/R.INSTALL862129db9f4f/qtbase/inst/local/include/smokegen/type.h
-- Installing: /tmp/RtmpazUzr0/R.INSTALL862129db9f4f/qtbase/inst/local/lib/libcppparser.dylib
-- Installing: /tmp/RtmpazUzr0/R.INSTALL862129db9f4f/qtbase/inst/local/lib/smokegen/generator_smoke.so
-- Installing: /tmp/RtmpazUzr0/R.INSTALL862129db9f4f/qtbase/inst/local/lib/smokegen/generator_dump.so
-- Installing: /tmp/RtmpazUzr0/R.INSTALL862129db9f4f/qtbase/inst/local/include/smoke.h
-- Installing: /tmp/RtmpazUzr0/R.INSTALL862129db9f4f/qtbase/inst/local/include/smoke/qt_smoke.h
-- Installing: /tmp/RtmpazUzr0/R.INSTALL862129db9f4f/qtbase/inst/local/lib/libsmokeqt.a
-- Installing: /tmp/RtmpazUzr0/R.INSTALL862129db9f4f/qtbase/inst/local/share/kdebindings/qtdefines
-- Installing: /tmp/RtmpazUzr0/R.INSTALL862129db9f4f/qtbase/inst/local/share/kdebindings/config.xml
mkdir -p ../src-build;
cd ../src-build; \
cmake ../src \
-DR_LIBRARIES="-F/Library/Frameworks/R.framework/.. -framework R" \
-DR_INCLUDES=/Library/Frameworks/R.framework/Resources/include \
-DCMAKE_INSTALL_PREFIX=../src; \
make install
-- The C compiler identification is GNU
-- The CXX compiler identification is GNU
-- Checking whether C compiler has -isysroot
-- Checking whether C compiler has -isysroot - yes
-- Checking whether C compiler supports OSX deployment target flag
-- Checking whether C compiler supports OSX deployment target flag - yes
-- Check for working C compiler: /usr/bin/gcc
-- Check for working C compiler: /usr/bin/gcc -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Checking whether CXX compiler has -isysroot
-- Checking whether CXX compiler has -isysroot - yes
-- Checking whether CXX compiler supports OSX deployment target flag
-- Checking whether CXX compiler supports OSX deployment target flag - yes
-- Check for working CXX compiler: /usr/bin/c++
-- Check for working CXX compiler: /usr/bin/c++ -- works
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Looking for Q_WS_X11
-- Looking for Q_WS_X11 - not found.
-- Looking for Q_WS_WIN
-- Looking for Q_WS_WIN - not found.
-- Looking for Q_WS_QWS
-- Looking for Q_WS_QWS - not found.
-- Looking for Q_WS_MAC
-- Looking for Q_WS_MAC - found
-- Looking for QT_MAC_USE_COCOA
-- Looking for QT_MAC_USE_COCOA - found
-- Found Qt4: /usr/bin/qmake (found suitable version "4.7.0", required is "4.0.0")
-- Could NOT find Qt4 (missing: QT_QTUITOOLS_INCLUDE_DIR) (found suitable version "4.7.0", required is "4.0.0")
-- Configuring done
-- Generating done
-- Build files have been written to: /tmp/RtmpazUzr0/R.INSTALL862129db9f4f/qtbase/src-build
[ 2%] Generating moc_EventLoop.cxx
Scanning dependencies of target qtbase
[ 5%] Building CXX object CMakeFiles/qtbase.dir/init.cpp.o
[ 7%] Building CXX object CMakeFiles/qtbase.dir/EventLoop.cpp.o
/tmp/RtmpazUzr0/R.INSTALL862129db9f4f/qtbase/src/EventLoop.cpp:23: warning: deprecated conversion from string constant to 'char*'
/tmp/RtmpazUzr0/R.INSTALL862129db9f4f/qtbase/src/EventLoop.cpp:23: warning: deprecated conversion from string constant to 'char*'
[ 10%] Building CXX object CMakeFiles/qtbase.dir/convert.cpp.o
[ 13%] Building CXX object CMakeFiles/qtbase.dir/wrap.cpp.o
[ 15%] Building CXX object CMakeFiles/qtbase.dir/metaobject.cpp.o
[ 18%] Building CXX object CMakeFiles/qtbase.dir/connect.cpp.o
[ 21%] Building CXX object CMakeFiles/qtbase.dir/invoke.cpp.o
[ 23%] Building CXX object CMakeFiles/qtbase.dir/dynamicqobject.cpp.o
[ 26%] Building CXX object CMakeFiles/qtbase.dir/RDynamicQObject.cpp.o
[ 28%] Building CXX object CMakeFiles/qtbase.dir/ClassFactory.cpp.o
[ 31%] Building CXX object CMakeFiles/qtbase.dir/Class.cpp.o
[ 34%] Building CXX object CMakeFiles/qtbase.dir/SmokeClass.cpp.o
[ 36%] Building CXX object CMakeFiles/qtbase.dir/MocClass.cpp.o
[ 39%] Building CXX object CMakeFiles/qtbase.dir/RClass.cpp.o
[ 42%] Building CXX object CMakeFiles/qtbase.dir/classes.cpp.o
[ 44%] Building CXX object CMakeFiles/qtbase.dir/ForeignMethod.cpp.o
[ 47%] Building CXX object CMakeFiles/qtbase.dir/SmokeMethod.cpp.o
[ 50%] Building CXX object CMakeFiles/qtbase.dir/RMethod.cpp.o
[ 52%] Building CXX object CMakeFiles/qtbase.dir/MocMethod.cpp.o
[ 55%] Building CXX object CMakeFiles/qtbase.dir/DynamicBinding.cpp.o
[ 57%] Building CXX object CMakeFiles/qtbase.dir/MocDynamicBinding.cpp.o
[ 60%] Building CXX object CMakeFiles/qtbase.dir/MethodCall.cpp.o
[ 63%] Building CXX object CMakeFiles/qtbase.dir/type-handlers.cpp.o
[ 65%] Building CXX object CMakeFiles/qtbase.dir/MocStack.cpp.o
[ 68%] Building CXX object CMakeFiles/qtbase.dir/MocProperty.cpp.o
[ 71%] Building CXX object CMakeFiles/qtbase.dir/RProperty.cpp.o
[ 73%] Building CXX object CMakeFiles/qtbase.dir/SmokeModule.cpp.o
[ 76%] Building CXX object CMakeFiles/qtbase.dir/module.cpp.o
[ 78%] Building CXX object CMakeFiles/qtbase.dir/RSmokeBinding.cpp.o
[ 81%] Building CXX object CMakeFiles/qtbase.dir/SmokeList.cpp.o
[ 84%] Building CXX object CMakeFiles/qtbase.dir/SmokeObject.cpp.o
[ 86%] Building CXX object CMakeFiles/qtbase.dir/ObjectTable.cpp.o
[ 89%] Building CXX object CMakeFiles/qtbase.dir/InstanceObjectTable.cpp.o
[ 92%] Building CXX object CMakeFiles/qtbase.dir/smoke.cpp.o
[ 94%] Building CXX object CMakeFiles/qtbase.dir/DataFrameModel.cpp.o
[ 97%] Building CXX object CMakeFiles/qtbase.dir/RTextFormattingDelegate.cpp.o
[100%] Building CXX object CMakeFiles/qtbase.dir/moc_EventLoop.cxx.o
Linking CXX shared library qtbase.so
[100%] Built target qtbase
Install the project...
-- Install configuration: ""
-- Installing: /tmp/RtmpazUzr0/R.INSTALL862129db9f4f/qtbase/src/./qtbase.so
installing to /Users/biocbuild/bbs-2.9-bioc/meat/qtbase.buildbin-libdir/qtbase/libs/ppc
* DONE (qtbase)
>>>>>>>
>>>>>>> FIXING LINKS FOR qtbase.buildbin-libdir/qtbase/libs/ppc/qtbase.so
>>>>>>>
install_name_tool -change "/usr/local/lib/libgcc_s.1.dylib" "/Library/Frameworks/R.framework/Versions/2.14/Resources/lib/libgcc_s.1.dylib" "qtbase.buildbin-libdir/qtbase/libs/ppc/qtbase.so"
install_name_tool -change "/usr/local/lib/libgfortran.2.dylib" "/Library/Frameworks/R.framework/Versions/2.14/Resources/lib/libgfortran.2.dylib" "qtbase.buildbin-libdir/qtbase/libs/ppc/qtbase.so"
install_name_tool -change "/usr/local/lib/libreadline.5.2.dylib" "/Library/Frameworks/R.framework/Versions/2.14/Resources/lib/libreadline.5.2.dylib" "qtbase.buildbin-libdir/qtbase/libs/ppc/qtbase.so"
install_name_tool -change "/usr/local/lib/libreadline.dylib" "/Library/Frameworks/R.framework/Versions/2.14/Resources/lib/libreadline.dylib" "qtbase.buildbin-libdir/qtbase/libs/ppc/qtbase.so"
>>>>>>>
>>>>>>> INSTALLATION OF x86_64 LIBS WITH 'R_ARCH=/x86_64 R CMD INSTALL --preclean --no-multiarch --no-test-load --library=qtbase.buildbin-libdir --libs-only qtbase_1.0.0.tar.gz'
>>>>>>>
* installing *source* package 'qtbase' ...
rm -rf ../kdebindings-build
rm -rf ../src-build
rm -rf ../inst/local
** libs
** arch - x86_64
mkdir -p ../kdebindings-build;
cd ../kdebindings-build; \
cmake ../kdebindings -DCMAKE_INSTALL_PREFIX=../inst/local; \
LD_LIBRARY_PATH=../../generator/bin make install
-- The C compiler identification is GNU
-- The CXX compiler identification is GNU
-- Checking whether C compiler has -isysroot
-- Checking whether C compiler has -isysroot - yes
-- Checking whether C compiler supports OSX deployment target flag
-- Checking whether C compiler supports OSX deployment target flag - yes
-- Check for working C compiler: /usr/bin/gcc
-- Check for working C compiler: /usr/bin/gcc -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Checking whether CXX compiler has -isysroot
-- Checking whether CXX compiler has -isysroot - yes
-- Checking whether CXX compiler supports OSX deployment target flag
-- Checking whether CXX compiler supports OSX deployment target flag - yes
-- Check for working CXX compiler: /usr/bin/c++
-- Check for working CXX compiler: /usr/bin/c++ -- works
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Looking for Q_WS_X11
-- Looking for Q_WS_X11 - not found.
-- Looking for Q_WS_WIN
-- Looking for Q_WS_WIN - not found.
-- Looking for Q_WS_QWS
-- Looking for Q_WS_QWS - not found.
-- Looking for Q_WS_MAC
-- Looking for Q_WS_MAC - found
-- Looking for QT_MAC_USE_COCOA
-- Looking for QT_MAC_USE_COCOA - found
-- Found Qt4: /usr/bin/qmake (found suitable version "4.7.0", required is "4.0.0")
-- Could NOT find Qt4 (missing: QT_QTUITOOLS_INCLUDE_DIR) (found suitable version "4.7.0", required is "4.0.0")
-- Found Perl: /usr/bin/perl
-- Checking how Qt was built...
-- Threshold is set to 15
-- QT_NO_DEBUG *Undefined*
-- QT_NO_ACCESSIBILITY [Defined]
-- QT_NO_STYLE_PLASTIQUE *Undefined*
-- QT_NO_STYLE_WINDOWSXP [Defined]
-- QT_NO_STYLE_WINDOWS *Undefined*
-- QT_NO_STYLE_MAC [Defined]
-- QT_NO_STYLE_CLEANLOOKS *Undefined*
-- QT_NO_TABLEVIEW *Undefined*
-- QT_OPENGL_LIB [Defined]
-- QT_DECLARATIVE_LIB [Defined]
-- QT_SCRIPT_LIB [Defined]
-- QT_SVG_LIB [Defined]
-- QT_HELP_LIB [Defined]
-- QT_WEBKIT_LIB [Defined]
-- QT_MULTIMEDIA_LIB [Defined]
-- QT_GUI_LIB [Defined]
-- QT_TEST_LIB [Defined]
-- QT_DBUS_LIB [Defined]
-- QT_XML_LIB [Defined]
-- QT_SQL_LIB [Defined]
-- QT_XMLPATTERNS_LIB [Defined]
-- QT_NETWORK_LIB [Defined]
-- QT_CORE_LIB [Defined]
-- Build Smoke... yes - Qt
-- Configuring done
-- Generating done
-- Build files have been written to: /tmp/RtmpN0M8Ev/R.INSTALLb81af77cc0d/qtbase/kdebindings-build
Scanning dependencies of target cppparser
[ 1%] Building CXX object generator/parser/CMakeFiles/cppparser.dir/ast.cpp.o
[ 3%] Building CXX object generator/parser/CMakeFiles/cppparser.dir/default_visitor.cpp.o
[ 4%] Building CXX object generator/parser/CMakeFiles/cppparser.dir/memorypool.cpp.o
[ 6%] Building CXX object generator/parser/CMakeFiles/cppparser.dir/visitor.cpp.o
[ 8%] Building CXX object generator/parser/CMakeFiles/cppparser.dir/control.cpp.o
[ 9%] Building CXX object generator/parser/CMakeFiles/cppparser.dir/lexer.cpp.o
[ 11%] Building CXX object generator/parser/CMakeFiles/cppparser.dir/parser.cpp.o
/tmp/RtmpN0M8Ev/R.INSTALLb81af77cc0d/qtbase/kdebindings/generator/parser/parser.cpp:1036:2: warning: #warning "implement me"
/tmp/RtmpN0M8Ev/R.INSTALLb81af77cc0d/qtbase/kdebindings/generator/parser/parser.cpp:2604:2: warning: #warning "implemente me (AST)"
/tmp/RtmpN0M8Ev/R.INSTALLb81af77cc0d/qtbase/kdebindings/generator/parser/parser.cpp:3490:2: warning: #warning "mark the ast as constant"
[ 13%] Building CXX object generator/parser/CMakeFiles/cppparser.dir/listnode.cpp.o
[ 14%] Building CXX object generator/parser/CMakeFiles/cppparser.dir/tokens.cpp.o
[ 16%] Building CXX object generator/parser/CMakeFiles/cppparser.dir/dumptree.cpp.o
[ 18%] Building CXX object generator/parser/CMakeFiles/cppparser.dir/parsesession.cpp.o
/tmp/RtmpN0M8Ev/R.INSTALLb81af77cc0d/qtbase/kdebindings/generator/parser/parsesession.cpp: In destructor 'ParseSession::˜ParseSession()':
/tmp/RtmpN0M8Ev/R.INSTALLb81af77cc0d/qtbase/kdebindings/generator/parser/parsesession.cpp:42: warning: possible problem detected in invocation of delete operator:
/tmp/RtmpN0M8Ev/R.INSTALLb81af77cc0d/qtbase/kdebindings/generator/parser/parsesession.cpp:42: warning: invalid use of incomplete type 'struct rpp::MacroBlock'
/tmp/RtmpN0M8Ev/R.INSTALLb81af77cc0d/qtbase/kdebindings/generator/parser/parsesession.h:43: warning: forward declaration of 'struct rpp::MacroBlock'
/tmp/RtmpN0M8Ev/R.INSTALLb81af77cc0d/qtbase/kdebindings/generator/parser/parsesession.cpp:42: note: neither the destructor nor the class-specific operator delete will be called, even if they are declared when the class is defined.
[ 19%] Building CXX object generator/parser/CMakeFiles/cppparser.dir/commentparser.cpp.o
[ 21%] Building CXX object generator/parser/CMakeFiles/cppparser.dir/commentformatter.cpp.o
[ 22%] Building CXX object generator/parser/CMakeFiles/cppparser.dir/codegenerator.cpp.o
[ 24%] Building CXX object generator/parser/CMakeFiles/cppparser.dir/indexedstring.cpp.o
[ 26%] Building CXX object generator/parser/CMakeFiles/cppparser.dir/stringhelpers.cpp.o
[ 27%] Building CXX object generator/parser/CMakeFiles/cppparser.dir/rpp/pp-stream.cpp.o
[ 29%] Building CXX object generator/parser/CMakeFiles/cppparser.dir/rpp/pp-macro-expander.cpp.o
[ 31%] Building CXX object generator/parser/CMakeFiles/cppparser.dir/rpp/pp-scanner.cpp.o
[ 32%] Building CXX object generator/parser/CMakeFiles/cppparser.dir/rpp/pp-macro.cpp.o
[ 34%] Building CXX object generator/parser/CMakeFiles/cppparser.dir/rpp/pp-engine.cpp.o
[ 36%] Building CXX object generator/parser/CMakeFiles/cppparser.dir/rpp/pp-internal.cpp.o
[ 37%] Building CXX object generator/parser/CMakeFiles/cppparser.dir/rpp/pp-environment.cpp.o
[ 39%] Building CXX object generator/parser/CMakeFiles/cppparser.dir/rpp/pp-location.cpp.o
[ 40%] Building CXX object generator/parser/CMakeFiles/cppparser.dir/rpp/preprocessor.cpp.o
[ 42%] Building CXX object generator/parser/CMakeFiles/cppparser.dir/rpp/chartools.cpp.o
Linking CXX shared library ../bin/libcppparser.dylib
[ 42%] Built target cppparser
Scanning dependencies of target smokegen
[ 44%] Building CXX object generator/CMakeFiles/smokegen.dir/main.cpp.o
[ 45%] Building CXX object generator/CMakeFiles/smokegen.dir/generatorenvironment.cpp.o
[ 47%] Building CXX object generator/CMakeFiles/smokegen.dir/generatorvisitor.cpp.o
[ 49%] Building CXX object generator/CMakeFiles/smokegen.dir/generatorpreprocessor.cpp.o
[ 50%] Building CXX object generator/CMakeFiles/smokegen.dir/options.cpp.o
[ 52%] Building CXX object generator/CMakeFiles/smokegen.dir/type_compiler.cpp.o
[ 54%] Building CXX object generator/CMakeFiles/smokegen.dir/name_compiler.cpp.o
/tmp/RtmpN0M8Ev/R.INSTALLb81af77cc0d/qtbase/kdebindings/generator/name_compiler.cpp:139:2: warning: #warning "NameCompiler::visitUnqualifiedName() -- implement me"
[ 55%] Building CXX object generator/CMakeFiles/smokegen.dir/type.cpp.o
Linking CXX executable bin/smokegen
[ 55%] Built target smokegen
Scanning dependencies of target generator_smoke
[ 57%] Building CXX object generator/generators/smoke/CMakeFiles/generator_smoke.dir/generator_smoke.cpp.o
[ 59%] Building CXX object generator/generators/smoke/CMakeFiles/generator_smoke.dir/writeClasses.cpp.o
[ 60%] Building CXX object generator/generators/smoke/CMakeFiles/generator_smoke.dir/writeSmokeDataFile.cpp.o
[ 62%] Building CXX object generator/generators/smoke/CMakeFiles/generator_smoke.dir/helpers.cpp.o
Linking CXX shared module ../../bin/generator_smoke.so
[ 62%] Built target generator_smoke
Scanning dependencies of target generator_dump
[ 63%] Building CXX object generator/generators/dump/CMakeFiles/generator_dump.dir/generator_dump.cpp.o
Linking CXX shared module ../../bin/generator_dump.so
[ 63%] Built target generator_dump
[ 65%] Generating smokedata.cpp, x_1.cpp, x_2.cpp, x_3.cpp, x_4.cpp, x_5.cpp, x_6.cpp, x_7.cpp, x_8.cpp, x_9.cpp, x_10.cpp, x_11.cpp, x_12.cpp, x_13.cpp, x_14.cpp, x_15.cpp, x_16.cpp, x_17.cpp, x_18.cpp, x_19.cpp, x_20.cpp
using generator "/private/tmp/RtmpN0M8Ev/R.INSTALLb81af77cc0d/qtbase/kdebindings-build/generator/bin/generator_smoke.so"
include directory "/Library/Frameworks/QtCore.framework;/Library/Frameworks/QtCore.framework" doesn't exist
parsing "/tmp/RtmpN0M8Ev/R.INSTALLb81af77cc0d/qtbase/kdebindings/smoke/qt/qt_includes.h"
Generating SMOKE sources...
preparing SMOKE data [qt]
writing out smokedata.cpp [qt]
writing out x_*.cpp [qt]
Done.
Scanning dependencies of target smokeqt
[ 67%] Building CXX object smoke/qt/CMakeFiles/smokeqt.dir/smokedata.cpp.o
[ 68%] Building CXX object smoke/qt/CMakeFiles/smokeqt.dir/x_1.cpp.o
[ 70%] Building CXX object smoke/qt/CMakeFiles/smokeqt.dir/x_2.cpp.o
[ 72%] Building CXX object smoke/qt/CMakeFiles/smokeqt.dir/x_3.cpp.o
[ 73%] Building CXX object smoke/qt/CMakeFiles/smokeqt.dir/x_4.cpp.o
[ 75%] Building CXX object smoke/qt/CMakeFiles/smokeqt.dir/x_5.cpp.o
[ 77%] Building CXX object smoke/qt/CMakeFiles/smokeqt.dir/x_6.cpp.o
[ 78%] Building CXX object smoke/qt/CMakeFiles/smokeqt.dir/x_7.cpp.o
[ 80%] Building CXX object smoke/qt/CMakeFiles/smokeqt.dir/x_8.cpp.o
[ 81%] Building CXX object smoke/qt/CMakeFiles/smokeqt.dir/x_9.cpp.o
[ 83%] Building CXX object smoke/qt/CMakeFiles/smokeqt.dir/x_10.cpp.o
[ 85%] Building CXX object smoke/qt/CMakeFiles/smokeqt.dir/x_11.cpp.o
[ 86%] Building CXX object smoke/qt/CMakeFiles/smokeqt.dir/x_12.cpp.o
[ 88%] Building CXX object smoke/qt/CMakeFiles/smokeqt.dir/x_13.cpp.o
[ 90%] Building CXX object smoke/qt/CMakeFiles/smokeqt.dir/x_14.cpp.o
[ 91%] Building CXX object smoke/qt/CMakeFiles/smokeqt.dir/x_15.cpp.o
[ 93%] Building CXX object smoke/qt/CMakeFiles/smokeqt.dir/x_16.cpp.o
[ 95%] Building CXX object smoke/qt/CMakeFiles/smokeqt.dir/x_17.cpp.o
[ 96%] Building CXX object smoke/qt/CMakeFiles/smokeqt.dir/x_18.cpp.o
[ 98%] Building CXX object smoke/qt/CMakeFiles/smokeqt.dir/x_19.cpp.o
[100%] Building CXX object smoke/qt/CMakeFiles/smokeqt.dir/x_20.cpp.o
Linking CXX static library libsmokeqt.a
[100%] Built target smokeqt
Install the project...
-- Install configuration: ""
-- Installing: /tmp/RtmpN0M8Ev/R.INSTALLb81af77cc0d/qtbase/inst/local/bin/smokegen
-- Installing: /tmp/RtmpN0M8Ev/R.INSTALLb81af77cc0d/qtbase/inst/local/include/smokegen/generatorenvironment.h
-- Installing: /tmp/RtmpN0M8Ev/R.INSTALLb81af77cc0d/qtbase/inst/local/include/smokegen/generator_export.h
-- Installing: /tmp/RtmpN0M8Ev/R.INSTALLb81af77cc0d/qtbase/inst/local/include/smokegen/generatorpreprocessor.h
-- Installing: /tmp/RtmpN0M8Ev/R.INSTALLb81af77cc0d/qtbase/inst/local/include/smokegen/generatorvisitor.h
-- Installing: /tmp/RtmpN0M8Ev/R.INSTALLb81af77cc0d/qtbase/inst/local/include/smokegen/name_compiler.h
-- Installing: /tmp/RtmpN0M8Ev/R.INSTALLb81af77cc0d/qtbase/inst/local/include/smokegen/options.h
-- Installing: /tmp/RtmpN0M8Ev/R.INSTALLb81af77cc0d/qtbase/inst/local/include/smokegen/type_compiler.h
-- Installing: /tmp/RtmpN0M8Ev/R.INSTALLb81af77cc0d/qtbase/inst/local/include/smokegen/type.h
-- Installing: /tmp/RtmpN0M8Ev/R.INSTALLb81af77cc0d/qtbase/inst/local/lib/libcppparser.dylib
-- Installing: /tmp/RtmpN0M8Ev/R.INSTALLb81af77cc0d/qtbase/inst/local/lib/smokegen/generator_smoke.so
-- Installing: /tmp/RtmpN0M8Ev/R.INSTALLb81af77cc0d/qtbase/inst/local/lib/smokegen/generator_dump.so
-- Installing: /tmp/RtmpN0M8Ev/R.INSTALLb81af77cc0d/qtbase/inst/local/include/smoke.h
-- Installing: /tmp/RtmpN0M8Ev/R.INSTALLb81af77cc0d/qtbase/inst/local/include/smoke/qt_smoke.h
-- Installing: /tmp/RtmpN0M8Ev/R.INSTALLb81af77cc0d/qtbase/inst/local/lib/libsmokeqt.a
-- Installing: /tmp/RtmpN0M8Ev/R.INSTALLb81af77cc0d/qtbase/inst/local/share/kdebindings/qtdefines
-- Installing: /tmp/RtmpN0M8Ev/R.INSTALLb81af77cc0d/qtbase/inst/local/share/kdebindings/config.xml
mkdir -p ../src-build;
cd ../src-build; \
cmake ../src \
-DR_LIBRARIES="-F/Library/Frameworks/R.framework/.. -framework R" \
-DR_INCLUDES=/Library/Frameworks/R.framework/Resources/include \
-DCMAKE_INSTALL_PREFIX=../src; \
make install
-- The C compiler identification is GNU
-- The CXX compiler identification is GNU
-- Checking whether C compiler has -isysroot
-- Checking whether C compiler has -isysroot - yes
-- Checking whether C compiler supports OSX deployment target flag
-- Checking whether C compiler supports OSX deployment target flag - yes
-- Check for working C compiler: /usr/bin/gcc
-- Check for working C compiler: /usr/bin/gcc -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Checking whether CXX compiler has -isysroot
-- Checking whether CXX compiler has -isysroot - yes
-- Checking whether CXX compiler supports OSX deployment target flag
-- Checking whether CXX compiler supports OSX deployment target flag - yes
-- Check for working CXX compiler: /usr/bin/c++
-- Check for working CXX compiler: /usr/bin/c++ -- works
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Looking for Q_WS_X11
-- Looking for Q_WS_X11 - not found.
-- Looking for Q_WS_WIN
-- Looking for Q_WS_WIN - not found.
-- Looking for Q_WS_QWS
-- Looking for Q_WS_QWS - not found.
-- Looking for Q_WS_MAC
-- Looking for Q_WS_MAC - found
-- Looking for QT_MAC_USE_COCOA
-- Looking for QT_MAC_USE_COCOA - found
-- Found Qt4: /usr/bin/qmake (found suitable version "4.7.0", required is "4.0.0")
-- Could NOT find Qt4 (missing: QT_QTUITOOLS_INCLUDE_DIR) (found suitable version "4.7.0", required is "4.0.0")
-- Configuring done
-- Generating done
-- Build files have been written to: /tmp/RtmpN0M8Ev/R.INSTALLb81af77cc0d/qtbase/src-build
[ 2%] Generating moc_EventLoop.cxx
Scanning dependencies of target qtbase
[ 5%] Building CXX object CMakeFiles/qtbase.dir/init.cpp.o
[ 7%] Building CXX object CMakeFiles/qtbase.dir/EventLoop.cpp.o
/tmp/RtmpN0M8Ev/R.INSTALLb81af77cc0d/qtbase/src/EventLoop.cpp:23: warning: deprecated conversion from string constant to 'char*'
/tmp/RtmpN0M8Ev/R.INSTALLb81af77cc0d/qtbase/src/EventLoop.cpp:23: warning: deprecated conversion from string constant to 'char*'
[ 10%] Building CXX object CMakeFiles/qtbase.dir/convert.cpp.o
[ 13%] Building CXX object CMakeFiles/qtbase.dir/wrap.cpp.o
[ 15%] Building CXX object CMakeFiles/qtbase.dir/metaobject.cpp.o
[ 18%] Building CXX object CMakeFiles/qtbase.dir/connect.cpp.o
[ 21%] Building CXX object CMakeFiles/qtbase.dir/invoke.cpp.o
[ 23%] Building CXX object CMakeFiles/qtbase.dir/dynamicqobject.cpp.o
[ 26%] Building CXX object CMakeFiles/qtbase.dir/RDynamicQObject.cpp.o
[ 28%] Building CXX object CMakeFiles/qtbase.dir/ClassFactory.cpp.o
[ 31%] Building CXX object CMakeFiles/qtbase.dir/Class.cpp.o
[ 34%] Building CXX object CMakeFiles/qtbase.dir/SmokeClass.cpp.o
[ 36%] Building CXX object CMakeFiles/qtbase.dir/MocClass.cpp.o
[ 39%] Building CXX object CMakeFiles/qtbase.dir/RClass.cpp.o
[ 42%] Building CXX object CMakeFiles/qtbase.dir/classes.cpp.o
[ 44%] Building CXX object CMakeFiles/qtbase.dir/ForeignMethod.cpp.o
[ 47%] Building CXX object CMakeFiles/qtbase.dir/SmokeMethod.cpp.o
[ 50%] Building CXX object CMakeFiles/qtbase.dir/RMethod.cpp.o
[ 52%] Building CXX object CMakeFiles/qtbase.dir/MocMethod.cpp.o
[ 55%] Building CXX object CMakeFiles/qtbase.dir/DynamicBinding.cpp.o
[ 57%] Building CXX object CMakeFiles/qtbase.dir/MocDynamicBinding.cpp.o
[ 60%] Building CXX object CMakeFiles/qtbase.dir/MethodCall.cpp.o
[ 63%] Building CXX object CMakeFiles/qtbase.dir/type-handlers.cpp.o
[ 65%] Building CXX object CMakeFiles/qtbase.dir/MocStack.cpp.o
[ 68%] Building CXX object CMakeFiles/qtbase.dir/MocProperty.cpp.o
[ 71%] Building CXX object CMakeFiles/qtbase.dir/RProperty.cpp.o
[ 73%] Building CXX object CMakeFiles/qtbase.dir/SmokeModule.cpp.o
[ 76%] Building CXX object CMakeFiles/qtbase.dir/module.cpp.o
[ 78%] Building CXX object CMakeFiles/qtbase.dir/RSmokeBinding.cpp.o
[ 81%] Building CXX object CMakeFiles/qtbase.dir/SmokeList.cpp.o
[ 84%] Building CXX object CMakeFiles/qtbase.dir/SmokeObject.cpp.o
[ 86%] Building CXX object CMakeFiles/qtbase.dir/ObjectTable.cpp.o
[ 89%] Building CXX object CMakeFiles/qtbase.dir/InstanceObjectTable.cpp.o
[ 92%] Building CXX object CMakeFiles/qtbase.dir/smoke.cpp.o
[ 94%] Building CXX object CMakeFiles/qtbase.dir/DataFrameModel.cpp.o
[ 97%] Building CXX object CMakeFiles/qtbase.dir/RTextFormattingDelegate.cpp.o
[100%] Building CXX object CMakeFiles/qtbase.dir/moc_EventLoop.cxx.o
Linking CXX shared library qtbase.so
[100%] Built target qtbase
Install the project...
-- Install configuration: ""
-- Installing: /tmp/RtmpN0M8Ev/R.INSTALLb81af77cc0d/qtbase/src/./qtbase.so
installing to /Users/biocbuild/bbs-2.9-bioc/meat/qtbase.buildbin-libdir/qtbase/libs/x86_64
* DONE (qtbase)
>>>>>>>
>>>>>>> FIXING LINKS FOR qtbase.buildbin-libdir/qtbase/libs/x86_64/qtbase.so
>>>>>>>
install_name_tool -change "/usr/local/lib/libgcc_s.1.dylib" "/Library/Frameworks/R.framework/Versions/2.14/Resources/lib/libgcc_s.1.dylib" "qtbase.buildbin-libdir/qtbase/libs/x86_64/qtbase.so"
install_name_tool -change "/usr/local/lib/libgfortran.2.dylib" "/Library/Frameworks/R.framework/Versions/2.14/Resources/lib/libgfortran.2.dylib" "qtbase.buildbin-libdir/qtbase/libs/x86_64/qtbase.so"
install_name_tool -change "/usr/local/lib/libreadline.5.2.dylib" "/Library/Frameworks/R.framework/Versions/2.14/Resources/lib/libreadline.5.2.dylib" "qtbase.buildbin-libdir/qtbase/libs/x86_64/qtbase.so"
install_name_tool -change "/usr/local/lib/libreadline.dylib" "/Library/Frameworks/R.framework/Versions/2.14/Resources/lib/libreadline.dylib" "qtbase.buildbin-libdir/qtbase/libs/x86_64/qtbase.so"