gene2pathway 2.6.0
Holger Froehlich
| Snapshot Date: 2012-03-07 18:21:26 -0800 (Wed, 07 Mar 2012) | | URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_9/madman/Rpacks/gene2pathway | | Last Changed Rev: 59920 / Revision: 63606 | | Last Changed Date: 2011-10-31 15:59:03 -0700 (Mon, 31 Oct 2011) |
| wilson2 | Linux (openSUSE 11.4) / x86_64 | OK | WARNINGS | |
| moscato1 | Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64 | OK | WARNINGS | [ OK ] |
| pitt | Mac OS X Leopard (10.5.8) / i386 | OK | WARNINGS | OK |
install for i386
* installing *source* package 'gene2pathway' ...
** R
** data
** inst
** preparing package for lazy loading
Note: Method with signature "PrimitiveSOAPType#list" chosen for function "resolve",
target signature "PrimitiveSOAPType#SchemaCollection".
"SOAPType#SchemaCollection" would also be valid
Warning: Class "VirtualSOAPClass" is defined (with package slot 'SSOAP') but no metadata object found to revise subclass information---not exported? Making a copy in package '.GlobalEnv'
Warning: Class "VirtualXMLSchemaClass" is defined (with package slot 'XMLSchema') but no metadata object found to revise subclass information---not exported? Making a copy in package '.GlobalEnv'
Note: Method with signature "ArrayType#list" chosen for function "resolve",
target signature "ArrayType#SchemaCollection".
"SimpleSequenceType#SchemaCollection" would also be valid
Warning in .simpleDuplicateClass(def, prev) :
A specification for S3 class "connection" in package 'graph' seems equivalent to one from package 'SSOAP' and is not turning on duplicate class definitions for this class
Warning in .simpleDuplicateClass(def, prev) :
A specification for S3 class "connection" in package 'IRanges' seems equivalent to one from package 'SSOAP' and is not turning on duplicate class definitions for this class
Warning in .simpleDuplicateClass(def, prev) :
A specification for S3 class "file" in package 'IRanges' seems equivalent to one from package 'graph' and is not turning on duplicate class definitions for this class
** help
*** installing help indices
** building package indices ...
*** tangling vignette sources ...
'gene2pathway.Rnw' using 'latin1'
** testing if installed package can be loaded
Note: Method with signature "PrimitiveSOAPType#list" chosen for function "resolve",
target signature "PrimitiveSOAPType#SchemaCollection".
"SOAPType#SchemaCollection" would also be valid
Note: Method with signature "ArrayType#list" chosen for function "resolve",
target signature "ArrayType#SchemaCollection".
"SimpleSequenceType#SchemaCollection" would also be valid
Warning messages:
1: Class "VirtualSOAPClass" is defined (with package slot 'SSOAP') but no metadata object found to revise subclass information---not exported? Making a copy in package '.GlobalEnv'
2: Class "VirtualXMLSchemaClass" is defined (with package slot 'XMLSchema') but no metadata object found to revise subclass information---not exported? Making a copy in package '.GlobalEnv'
add DLL for x64
* installing *source* package 'gene2pathway' ...
** testing if installed package can be loaded
Note: Method with signature "PrimitiveSOAPType#list" chosen for function "resolve",
target signature "PrimitiveSOAPType#SchemaCollection".
"SOAPType#SchemaCollection" would also be valid
Note: Method with signature "ArrayType#list" chosen for function "resolve",
target signature "ArrayType#SchemaCollection".
"SimpleSequenceType#SchemaCollection" would also be valid
Warning messages:
1: Class "VirtualSOAPClass" is defined (with package slot 'SSOAP') but no metadata object found to revise subclass information---not exported? Making a copy in package '.GlobalEnv'
2: Class "VirtualXMLSchemaClass" is defined (with package slot 'XMLSchema') but no metadata object found to revise subclass information---not exported? Making a copy in package '.GlobalEnv'
* MD5 sums
packaged installation of 'gene2pathway' as gene2pathway_2.6.0.zip
* DONE (gene2pathway)