Package: altcdfenvs

Version: 2.15.0

Command: mkdir altcdfenvs.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh altcdfenvs_2.15.0.tar.gz /Library/Frameworks/R.framework/Versions/2.14/Resources/bin/R altcdfenvs.buildbin-libdir

StartedAt: 2011-06-22 06:01:13 -0700 (Wed, 22 Jun 2011)

EndedAt: 2011-06-22 06:01:32 -0700 (Wed, 22 Jun 2011)

EllapsedTime: 18.8 seconds

RetCode: 0

Status:  OK

PackageFile: altcdfenvs_2.15.0.tgz

PackageFileSize: 382.7 KiB

>>>>>>> 
>>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --library=altcdfenvs.buildbin-libdir altcdfenvs_2.15.0.tar.gz'
>>>>>>> 

* installing *source* package ‘altcdfenvs’ ...
** R
** data
** inst
** preparing package for lazy loading

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'browseVignettes()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation("pkgname")'.

Loading required package: IRanges

Attaching package: ‘IRanges’

The following object(s) are masked from ‘package:Biobase’:

    updateObject

The following object(s) are masked from ‘package:base’:

    Map, cbind, eval, intersect, mapply, order, paste, pmax, pmax.int,
    pmin, pmin.int, rbind, rep.int, setdiff, table, union

Loading required package: graph

Attaching package: ‘graph’

The following object(s) are masked from ‘package:Biostrings’:

    complement


Attaching package: ‘hypergraph’

The following object(s) are masked from ‘package:IRanges’:

    head, tail

The following object(s) are masked from ‘package:utils’:

    head, tail

NOTE: arguments in definition for validity method for class 'AffyProbesMatch' changed from (obj) to (object)
in method for ‘toHypergraph’ with signature ‘"CdfEnvAffy"’: no definition for class "CdfEnvAffy"
Creating a generic function for "plot" from package "graphics" in package “altcdfenvs”
** help
*** installing help indices
** building package indices ...
*** tangling vignette sources ...
   ‘altcdfenvs.Rnw’ 
   ‘modify.Rnw’ 
   ‘ngenomeschips.Rnw’ 
** testing if installed package can be loaded

* DONE (altcdfenvs)