Package: tkWidgets

Version: 1.32.0

Command: /home/biocbuild/bbs-2.9-bioc/R/bin/R CMD check --no-vignettes --timings tkWidgets_1.32.0.tar.gz

StartedAt: 2012-03-24 03:02:34 -0700 (Sat, 24 Mar 2012)

EndedAt: 2012-03-24 03:03:12 -0700 (Sat, 24 Mar 2012)

EllapsedTime: 37.8 seconds

RetCode: 0

Status:  OK

CheckDir: tkWidgets.Rcheck

Warnings: 0

* using log directory ‘/loc/home/biocbuild/bbs-2.9-bioc/meat/tkWidgets.Rcheck’
* using R version 2.14.2 (2012-02-29)
* using platform: x86_64-unknown-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘tkWidgets/DESCRIPTION’ ... OK
* this is package ‘tkWidgets’ version ‘1.32.0’
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking whether package ‘tkWidgets’ can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... NOTE
File ‘tkWidgets/R/zzz.R’:
  .onLoad calls:
    require("methods", quietly = TRUE)
    require("widgetTools", quietly = TRUE)
    require("DynDoc", quietly = TRUE)
    require(Biobase)

Package startup functions should not change the search path.
See section ‘Good practice’ in ?.onAttach.

* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... NOTE
‘library’ or ‘require’ call not declared from: ‘hgu95av2’
* checking examples ... OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in ‘inst/doc’ ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignettes ... SKIPPED
* checking PDF version of manual ... OK

* installing *source* package ‘tkWidgets’ ...
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices ...
*** tangling vignette sources ...
   ‘importWizard.Rnw’ 
   ‘tkWidgets.Rnw’ 
** testing if installed package can be loaded

* DONE (tkWidgets)

name	user	system	elapsed
DPExplorer	0	0	0
WName	0.004	0.000	0.003
appendSepDir	0.004	0.000	0.001
args2XML	0.004	0.000	0.007
argsWidget	0	0	0
colInfo-class	0.000	0.000	0.002
dataViewer	0	0	0
dbArgsWidget	0	0	0
eExplorer	0	0	0
fileBrowser	0.000	0.000	0.001
fileWizard	0.000	0.000	0.001
getLightTW	0.000	0.000	0.001
getWvalues	0.000	0.000	0.002
guess.sep	0.012	0.000	0.010
hasChar	0	0	0
importPhenoData	0	0	0
importWizard	0	0	0
listSelect	0	0	0
objNameToList	0.004	0.000	0.004
objViewer	0	0	0
objectBrowser	0	0	0
pExplorer	0.024	0.012	0.052
pickFiles	0.004	0.000	0.002
pickItems	0.000	0.000	0.001
pickObjs	0.000	0.000	0.001
setArgsList	0	0	0
stdType	0.004	0.000	0.005
vExplorer	0.004	0.000	0.001
values.Widget	0.000	0.000	0.003
widgetRender	0.000	0.000	0.001