rama 1.28.0
Raphael Gottardo
| Snapshot Date: 2012-01-08 18:22:44 -0800 (Sun, 08 Jan 2012) | | URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_9/madman/Rpacks/rama | | Last Changed Rev: 59920 / Revision: 61898 | | Last Changed Date: 2011-10-31 15:59:03 -0700 (Mon, 31 Oct 2011) |
| wilson2 | Linux (openSUSE 11.4) / x86_64 | OK | OK | |
| liverpool | Windows Server 2003 R2 (32-bit) / x64 | OK | OK | OK |
| gewurz | Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64 | OK | OK | [ OK ] |
| moscato1 | Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64 | OK | OK | OK |
| pitt | Mac OS X Leopard (10.5.8) / i386 | OK | OK | OK |
* installing *source* package 'rama' ...
** libs
x86_64-w64-mingw32-gcc -I"D:/biocbld/bbs-2.9-bioc/R/include" -O2 -Wall -std=gnu99 -mtune=core2 -c estimation_slice.c -o estimation_slice.o
estimation_slice.c: In function 'mcmc_shift':
estimation_slice.c:122:10: warning: unused variable 'SSeps_sd_new'
estimation_slice.c:121:10: warning: unused variable 'SSeps_sd'
estimation_slice.c:117:10: warning: unused variable 'pi'
estimation_slice.c:116:24: warning: unused variable 'SS12'
estimation_slice.c:116:17: warning: unused variable 'SSR2'
estimation_slice.c:116:10: warning: unused variable 'SSR1'
estimation_slice.c:115:25: warning: unused variable 'dens_epsilon_new'
estimation_slice.c:115:10: warning: unused variable 'dens_epsilon'
estimation_slice.c:114:22: warning: unused variable 'l_epsilon_new'
estimation_slice.c:114:10: warning: unused variable 'l_epsilon'
estimation_slice.c:113:27: warning: unused variable 'lambda_eps2_new'
estimation_slice.c:113:10: warning: unused variable 'lambda_eps1_new'
estimation_slice.c: In function 'slice_sampling_lambda_eps':
estimation_slice.c:484:3: warning: suggest parentheses around comparison in operand of '&'
estimation_slice.c:493:3: warning: suggest parentheses around comparison in operand of '&'
x86_64-w64-mingw32-gcc -I"D:/biocbld/bbs-2.9-bioc/R/include" -O2 -Wall -std=gnu99 -mtune=core2 -c ex_estimation_slice.c -o ex_estimation_slice.o
ex_estimation_slice.c: In function 'mcmc':
ex_estimation_slice.c:144:10: warning: unused variable 'old_a'
ex_estimation_slice.c:143:10: warning: unused variable 'old_b'
ex_estimation_slice.c:138:10: warning: unused variable 'sum_res2'
ex_estimation_slice.c:137:10: warning: unused variable 'sum_res1'
ex_estimation_slice.c:119:19: warning: unused variable 'dens_t_new'
ex_estimation_slice.c:119:10: warning: unused variable 'dens_t'
ex_estimation_slice.c:112:10: warning: unused variable 'pi'
x86_64-w64-mingw32-gcc -I"D:/biocbld/bbs-2.9-bioc/R/include" -O2 -Wall -std=gnu99 -mtune=core2 -c mean.sd.c -o mean.sd.o
x86_64-w64-mingw32-gcc -I"D:/biocbld/bbs-2.9-bioc/R/include" -O2 -Wall -std=gnu99 -mtune=core2 -c reorder.c -o reorder.o
x86_64-w64-mingw32-gcc -I"D:/biocbld/bbs-2.9-bioc/R/include" -O2 -Wall -std=gnu99 -mtune=core2 -c util.c -o util.o
util.c: In function 'product_mat_vec':
util.c:574:11: warning: unused variable 'k'
util.c: In function 'slice_sampling_a':
util.c:629:3: warning: suggest parentheses around comparison in operand of '|'
util.c:629:3: warning: suggest parentheses around comparison in operand of '&'
util.c:636:4: warning: suggest parentheses around comparison in operand of '&'
util.c:643:4: warning: suggest parentheses around comparison in operand of '&'
util.c:613:13: warning: unused variable 'v'
util.c: In function 'slice_sampling_b':
util.c:703:3: warning: suggest parentheses around comparison in operand of '|'
util.c:703:3: warning: suggest parentheses around comparison in operand of '&'
util.c:710:4: warning: suggest parentheses around comparison in operand of '&'
util.c:717:4: warning: suggest parentheses around comparison in operand of '&'
util.c:686:13: warning: unused variable 'v'
util.c: In function 'slice_sampling_b2':
util.c:767:3: warning: suggest parentheses around comparison in operand of '&'
util.c:775:3: warning: suggest parentheses around comparison in operand of '&'
util.c: In function 'slice_sampling_a2':
util.c:822:3: warning: suggest parentheses around comparison in operand of '&'
util.c:830:3: warning: suggest parentheses around comparison in operand of '&'
util.c: In function 'slice_sampling_rho':
util.c:876:3: warning: suggest parentheses around comparison in operand of '|'
util.c:876:3: warning: suggest parentheses around comparison in operand of '&'
util.c:883:4: warning: suggest parentheses around comparison in operand of '&'
util.c:890:4: warning: suggest parentheses around comparison in operand of '&'
util.c:860:13: warning: unused variable 'v'
util.c: In function 'slice_sampling_rho2':
util.c:935:3: warning: suggest parentheses around comparison in operand of '&'
util.c:944:3: warning: suggest parentheses around comparison in operand of '&'
util.c: In function 'slice_sampling_shift':
util.c:1019:3: warning: suggest parentheses around comparison in operand of '|'
util.c:1019:3: warning: suggest parentheses around comparison in operand of '&'
util.c:1026:4: warning: suggest parentheses around comparison in operand of '&'
util.c:1033:4: warning: suggest parentheses around comparison in operand of '&'
util.c:1000:13: warning: unused variable 'v'
util.c: In function 'slice_sampling_shift2':
util.c:1100:3: warning: suggest parentheses around comparison in operand of '&'
util.c:1108:3: warning: suggest parentheses around comparison in operand of '&'
util.c:1082:13: warning: unused variable 'v'
util.c: In function 'slice_sampling_p':
util.c:1248:3: warning: suggest parentheses around comparison in operand of '&'
util.c:1256:3: warning: suggest parentheses around comparison in operand of '&'
x86_64-w64-mingw32-gcc -shared -s -static-libgcc -o rama.dll tmp.def estimation_slice.o ex_estimation_slice.o mean.sd.o reorder.o util.o -LD:/biocbld/bbs-2.9-bioc/R/bin/x64 -lR
installing to D:/biocbld/bbs-2.9-bioc/meat/rama.buildbin-libdir/rama/libs/x64
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices ...
*** tangling vignette sources ...
'rama.Rnw'
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'rama' as rama_1.28.0.zip
* DONE (rama)