Package: TypeInfo

Version: 1.20.0

Command: D:\biocbld\bbs-2.9-bioc\R\bin\R.exe CMD check --no-vignettes --timings --no-multiarch TypeInfo_1.20.0.tar.gz

StartedAt: 2012-01-09 06:07:27 -0800 (Mon, 09 Jan 2012)

EndedAt: 2012-01-09 06:07:52 -0800 (Mon, 09 Jan 2012)

EllapsedTime: 25.5 seconds

RetCode: 0

Status:  OK

CheckDir: TypeInfo.Rcheck

Warnings: 0

* using log directory 'D:/biocbld/bbs-2.9-bioc/meat/TypeInfo.Rcheck'
* using R version 2.14.1 (2011-12-22)
* using platform: x86_64-pc-mingw32 (64-bit)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'TypeInfo/DESCRIPTION' ... OK
* this is package 'TypeInfo' version '1.20.0'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking whether package 'TypeInfo' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking examples ... OK
* checking for unstated dependencies in tests ... NOTE
'::' or ':::' import not declared from: 'Biobase'
'library' or 'require' call not declared from: 'Biobase'
* checking tests ...
  Running 'copyEnv.R'
  Running 'copySubstitute.R'
 OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in 'inst/doc' ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignettes ... SKIPPED
* checking PDF version of manual ... OK

* installing *source* package 'TypeInfo' ...
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices ...
*** tangling vignette sources ...
   'TypeInfoNews.Rnw' 
** testing if installed package can be loaded

* DONE (TypeInfo)

name	user	system	elapsed
DynamicTypeTest-class	0.03	0.00	0.03
IndependentTypeSpecification-class	0.11	0.00	0.13
IndependentTypeSpecification	0.01	0.00	0.01
NamedTypeTest-class	0.02	0.00	0.02
ReturnTypeSpecification	0	0	0
SimultaneousTypeSpecification	0.01	0.00	0.02
TypedSignature	0	0	0
checkArgs	0	0	0
hasParameterType	0.02	0.00	0.01
rewriteTypeCheck	0	0	0
showTypeInfo	0.01	0.00	0.02