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Package 447/514HostnameOS / ArchBUILDCHECKBUILD BIN
SamSPECTRAL 1.8.0
Habil Zare
Snapshot Date: 2012-03-23 18:21:46 -0700 (Fri, 23 Mar 2012)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_9/madman/Rpacks/SamSPECTRAL
Last Changed Rev: 59920 / Revision: 64395
Last Changed Date: 2011-10-31 15:59:03 -0700 (Mon, 31 Oct 2011)
wilson2 Linux (openSUSE 11.4) / x86_64  OK  WARNINGS 
moscato1 Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64  OK  WARNINGS [ OK ]
pitt Mac OS X Leopard (10.5.8) / i386  OK  WARNINGS  OK 

Summary

Package: SamSPECTRAL
Version: 1.8.0
Command: rm -rf SamSPECTRAL.buildbin-libdir && mkdir SamSPECTRAL.buildbin-libdir && D:\biocbld\bbs-2.9-bioc\R\bin\R.exe CMD INSTALL --build --merge-multiarch --library=SamSPECTRAL.buildbin-libdir SamSPECTRAL_1.8.0.tar.gz
StartedAt: 2012-03-24 04:09:40 -0700 (Sat, 24 Mar 2012)
EndedAt: 2012-03-24 04:10:21 -0700 (Sat, 24 Mar 2012)
EllapsedTime: 41.0 seconds
RetCode: 0
Status:  OK  
PackageFile: SamSPECTRAL_1.8.0.zip
PackageFileSize: 983.9 KiB

Command output


install for i386

* installing *source* package 'SamSPECTRAL' ...
** libs
gcc  -I"D:/biocbld/BBS-2˜1.9-B/R/include"          -O3 -Wall  -std=gnu99 -mtune=core2 -c Rinit.c -o Rinit.o
gcc  -I"D:/biocbld/BBS-2˜1.9-B/R/include"          -O3 -Wall  -std=gnu99 -mtune=core2 -c conductance_computation.c -o conductance_computation.o
conductance_computation.c: In function 'conductance_computation':
conductance_computation.c:155:17: warning: variable 'repres_ind' set but not used [-Wunused-but-set-variable]
conductance_computation.c:155:7: warning: variable 'density' set but not used [-Wunused-but-set-variable]
conductance_computation.c:153:31: warning: unused variable 'dj' [-Wunused-variable]
conductance_computation.c:153:27: warning: unused variable 'di' [-Wunused-variable]
conductance_computation.c:152:20: warning: unused variable 'memberLen' [-Wunused-variable]
gcc  -I"D:/biocbld/BBS-2˜1.9-B/R/include"          -O3 -Wall  -std=gnu99 -mtune=core2 -c maximum_of_rows.c -o maximum_of_rows.o
gcc -shared -s -static-libgcc -o SamSPECTRAL.dll tmp.def Rinit.o conductance_computation.o maximum_of_rows.o -LD:/biocbld/BBS-2˜1.9-B/R/bin/i386 -lR
installing to D:/biocbld/bbs-2.9-bioc/meat/SamSPECTRAL.buildbin-libdir/SamSPECTRAL/libs/i386
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices ...
*** tangling vignette sources ...
   'Clustering_by_SamSPECTRAL.Rnw' 
** testing if installed package can be loaded

add DLL for x64

* installing *source* package 'SamSPECTRAL' ...
** libs
gcc -m64 -I"D:/biocbld/BBS-2˜1.9-B/R/include"     -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O2 -Wall  -std=gnu99 -mtune=core2 -c Rinit.c -o Rinit.o
gcc -m64 -I"D:/biocbld/BBS-2˜1.9-B/R/include"     -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O2 -Wall  -std=gnu99 -mtune=core2 -c conductance_computation.c -o conductance_computation.o
conductance_computation.c: In function 'conductance_computation':
conductance_computation.c:155:17: warning: variable 'repres_ind' set but not used [-Wunused-but-set-variable]
conductance_computation.c:155:7: warning: variable 'density' set but not used [-Wunused-but-set-variable]
conductance_computation.c:153:31: warning: unused variable 'dj' [-Wunused-variable]
conductance_computation.c:153:27: warning: unused variable 'di' [-Wunused-variable]
conductance_computation.c:152:20: warning: unused variable 'memberLen' [-Wunused-variable]
gcc -m64 -I"D:/biocbld/BBS-2˜1.9-B/R/include"     -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O2 -Wall  -std=gnu99 -mtune=core2 -c maximum_of_rows.c -o maximum_of_rows.o
gcc -m64 -shared -s -static-libgcc -o SamSPECTRAL.dll tmp.def Rinit.o conductance_computation.o maximum_of_rows.o -Ld:/RCompile/CRANpkg/extralibs64/local/lib/x64 -Ld:/RCompile/CRANpkg/extralibs64/local/lib -LD:/biocbld/BBS-2˜1.9-B/R/bin/x64 -lR
installing to D:/biocbld/bbs-2.9-bioc/meat/SamSPECTRAL.buildbin-libdir/SamSPECTRAL/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'SamSPECTRAL' as SamSPECTRAL_1.8.0.zip

* DONE (SamSPECTRAL)