DNAcopy 1.28.0
Venkatraman E. Seshan
| Snapshot Date: 2012-03-23 18:21:46 -0700 (Fri, 23 Mar 2012) | | URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_9/madman/Rpacks/DNAcopy | | Last Changed Rev: 59920 / Revision: 64395 | | Last Changed Date: 2011-10-31 15:59:03 -0700 (Mon, 31 Oct 2011) |
| wilson2 | Linux (openSUSE 11.4) / x86_64 | OK | OK | |
| moscato1 | Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64 | OK | OK | [ OK ] |
| pitt | Mac OS X Leopard (10.5.8) / i386 | OK | OK | OK |
install for i386
* installing *source* package 'DNAcopy' ...
** libs
gfortran -O3 -mtune=core2 -c cbsWtstats.f -o cbsWtstats.o
gfortran -O3 -mtune=core2 -c cbststats.f -o cbststats.o
gfortran -O3 -mtune=core2 -c changepoints-wtd.f -o changepoints-wtd.o
gfortran -O3 -mtune=core2 -c changepoints.f -o changepoints.o
gfortran -O3 -mtune=core2 -c esegment.f -o esegment.o
gcc -I"D:/biocbld/BBS-2˜1.9-B/R/include" -O3 -Wall -std=gnu99 -mtune=core2 -c flchoose.c -o flchoose.o
gcc -I"D:/biocbld/BBS-2˜1.9-B/R/include" -O3 -Wall -std=gnu99 -mtune=core2 -c fphyper.c -o fphyper.o
gcc -I"D:/biocbld/BBS-2˜1.9-B/R/include" -O3 -Wall -std=gnu99 -mtune=core2 -c fpnorm.c -o fpnorm.o
gfortran -O3 -mtune=core2 -c getbdry.f -o getbdry.o
gfortran -O3 -mtune=core2 -c prune.f -o prune.o
gcc -I"D:/biocbld/BBS-2˜1.9-B/R/include" -O3 -Wall -std=gnu99 -mtune=core2 -c rshared.c -o rshared.o
gfortran -O3 -mtune=core2 -c segmentp.f -o segmentp.o
gfortran -O3 -mtune=core2 -c smoothCNA.f -o smoothCNA.o
gfortran -O3 -mtune=core2 -c tailprobs.f -o tailprobs.o
gcc -shared -s -static-libgcc -o DNAcopy.dll tmp.def cbsWtstats.o cbststats.o changepoints-wtd.o changepoints.o esegment.o flchoose.o fphyper.o fpnorm.o getbdry.o prune.o rshared.o segmentp.o smoothCNA.o tailprobs.o -lgfortran -LD:/biocbld/BBS-2˜1.9-B/R/bin/i386 -lR
installing to D:/biocbld/bbs-2.9-bioc/meat/DNAcopy.buildbin-libdir/DNAcopy/libs/i386
** R
** data
** moving datasets to lazyload DB
** demo
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices ...
*** tangling vignette sources ...
'DNAcopy.Rnw'
** testing if installed package can be loaded
add DLL for x64
* installing *source* package 'DNAcopy' ...
** libs
gfortran -m64 -O2 -mtune=core2 -c cbsWtstats.f -o cbsWtstats.o
gfortran -m64 -O2 -mtune=core2 -c cbststats.f -o cbststats.o
gfortran -m64 -O2 -mtune=core2 -c changepoints-wtd.f -o changepoints-wtd.o
gfortran -m64 -O2 -mtune=core2 -c changepoints.f -o changepoints.o
gfortran -m64 -O2 -mtune=core2 -c esegment.f -o esegment.o
gcc -m64 -I"D:/biocbld/BBS-2˜1.9-B/R/include" -I"d:/RCompile/CRANpkg/extralibs64/local/include" -O2 -Wall -std=gnu99 -mtune=core2 -c flchoose.c -o flchoose.o
gcc -m64 -I"D:/biocbld/BBS-2˜1.9-B/R/include" -I"d:/RCompile/CRANpkg/extralibs64/local/include" -O2 -Wall -std=gnu99 -mtune=core2 -c fphyper.c -o fphyper.o
gcc -m64 -I"D:/biocbld/BBS-2˜1.9-B/R/include" -I"d:/RCompile/CRANpkg/extralibs64/local/include" -O2 -Wall -std=gnu99 -mtune=core2 -c fpnorm.c -o fpnorm.o
gfortran -m64 -O2 -mtune=core2 -c getbdry.f -o getbdry.o
gfortran -m64 -O2 -mtune=core2 -c prune.f -o prune.o
gcc -m64 -I"D:/biocbld/BBS-2˜1.9-B/R/include" -I"d:/RCompile/CRANpkg/extralibs64/local/include" -O2 -Wall -std=gnu99 -mtune=core2 -c rshared.c -o rshared.o
gfortran -m64 -O2 -mtune=core2 -c segmentp.f -o segmentp.o
gfortran -m64 -O2 -mtune=core2 -c smoothCNA.f -o smoothCNA.o
gfortran -m64 -O2 -mtune=core2 -c tailprobs.f -o tailprobs.o
gcc -m64 -shared -s -static-libgcc -o DNAcopy.dll tmp.def cbsWtstats.o cbststats.o changepoints-wtd.o changepoints.o esegment.o flchoose.o fphyper.o fpnorm.o getbdry.o prune.o rshared.o segmentp.o smoothCNA.o tailprobs.o -Ld:/RCompile/CRANpkg/extralibs64/local/lib/x64 -Ld:/RCompile/CRANpkg/extralibs64/local/lib -lgfortran -LD:/biocbld/BBS-2˜1.9-B/R/bin/x64 -lR
installing to D:/biocbld/bbs-2.9-bioc/meat/DNAcopy.buildbin-libdir/DNAcopy/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'DNAcopy' as DNAcopy_1.28.0.zip
* DONE (DNAcopy)