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Package 234/472HostnameOS / ArchBUILDCHECKBUILD BIN
iFlow 2.5.0
Kyongryun Lee
Snapshot Date: 2011-06-21 19:21:48 -0700 (Tue, 21 Jun 2011)
URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/iFlow
Last Changed Rev: 54802 / Revision: 56351
Last Changed Date: 2011-04-13 15:36:43 -0700 (Wed, 13 Apr 2011)
wilson2 Linux (openSUSE 11.4) / x86_64  OK  WARNINGS 
liverpool Windows Server 2003 R2 (32-bit) / x64 N O T   S U P P O R T E D
gewurz Windows Server 2008 R2 Enterprise (64-bit) / x64 N O T   S U P P O R T E D
moscato1 Windows Server 2008 R2 Enterprise (64-bit) / x64 N O T   S U P P O R T E D
pelham Mac OS X Leopard (10.5.8) / i386  OK  WARNINGS [ OK ]

Summary

Package: iFlow
Version: 2.5.0
Command: mkdir iFlow.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh iFlow_2.5.0.tar.gz /Library/Frameworks/R.framework/Versions/2.14/Resources/bin/R iFlow.buildbin-libdir
StartedAt: 2011-06-22 06:15:33 -0700 (Wed, 22 Jun 2011)
EndedAt: 2011-06-22 06:15:55 -0700 (Wed, 22 Jun 2011)
EllapsedTime: 21.4 seconds
RetCode: 0
Status:  OK 
PackageFile: iFlow_2.5.0.tgz
PackageFileSize: 1.052 MiB

Command output

>>>>>>> 
>>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --library=iFlow.buildbin-libdir iFlow_2.5.0.tar.gz'
>>>>>>> 

* installing *source* package ‘iFlow’ ...
** R
** inst
** preparing package for lazy loading
Loading required package: Biobase

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'browseVignettes()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation("pkgname")'.

Loading required package: rrcov
Loading required package: robustbase
Loading required package: pcaPP
Loading required package: mvtnorm
Scalable Robust Estimators with High Breakdown Point (version 1.3-00)

Attaching package: ‘flowCore’

The following object(s) are masked from ‘package:stats’:

    alias, filter

Loading required package: lattice
KernSmooth 2.23 loaded
Copyright M. P. Wand 1997-2009
Loading required package: fda
Loading required package: splines
Loading required package: zoo
Loading required package: mvoutlier
Loading required package: compositions
Loading required package: rgl
Loading required package: tensorA

Attaching package: ‘tensorA’

The following object(s) are masked from ‘package:base’:

    norm

Loading required package: energy
Loading required package: boot

Attaching package: ‘boot’

The following object(s) are masked from ‘package:fda’:

    melanoma

The following object(s) are masked from ‘package:lattice’:

    melanoma

The following object(s) are masked from ‘package:robustbase’:

    salinity

Loading required package: MASS
Welcome to compositions, a package for compositional data analysis.

Get help with "? compositions"
Version info: to ensure compatibility with R > 2.7.0.
 ".inv" in function names has globaly been replaced by "Inv"
 similarly ".row" and ".col" respectively by "Row" and "Col".

WARNING
Please, take into account that this piece of software does complex   
geometric operations in high-dimensional spaces, possibly using      
different incompatible geometries. In particular, be advised that    
arithmetic operations (+ and *) might have non-conventional meanings.
Double-check that you are doing reasonable things. The mere fact that
the package computes something does not imply that this is reasonable

Attaching package: ‘compositions’

The following object(s) are masked from ‘package:flowCore’:

    normalize

The following object(s) are masked from ‘package:stats’:

    cor, cov, dist, var

The following object(s) are masked from ‘package:base’:

    %*%, scale, scale.default

Loading required package: robCompositions
Loading required package: car
Loading required package: nnet
Loading required package: survival

Attaching package: ‘survival’

The following object(s) are masked from ‘package:boot’:

    aml

The following object(s) are masked from ‘package:robustbase’:

    heart


Attaching package: ‘car’

The following object(s) are masked from ‘package:boot’:

    logit


--------

for references have a look at
citation('robCompositions')    
--------


Attaching package: ‘robCompositions’

The following object(s) are masked from ‘package:compositions’:

    alr, clr, ilr

Loading required package: cluster
** help
*** installing help indices
** building package indices ...
*** tangling vignette sources ...
   ‘iflow.Rnw’ 
** testing if installed package can be loaded
Scalable Robust Estimators with High Breakdown Point (version 1.3-00)
Welcome to compositions, a package for compositional data analysis.

Get help with "? compositions"
Version info: to ensure compatibility with R > 2.7.0.
 ".inv" in function names has globaly been replaced by "Inv"
 similarly ".row" and ".col" respectively by "Row" and "Col".

WARNING
Please, take into account that this piece of software does complex   
geometric operations in high-dimensional spaces, possibly using      
different incompatible geometries. In particular, be advised that    
arithmetic operations (+ and *) might have non-conventional meanings.
Double-check that you are doing reasonable things. The mere fact that
the package computes something does not imply that this is reasonable

--------

for references have a look at
citation('robCompositions')    
--------


* DONE (iFlow)