Package: charm

Version: 1.5.5

Command: mkdir charm.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh charm_1.5.5.tar.gz /Library/Frameworks/R.framework/Versions/2.14/Resources/bin/R charm.buildbin-libdir

StartedAt: 2011-07-07 06:33:09 -0700 (Thu, 07 Jul 2011)

EndedAt: 2011-07-07 06:33:45 -0700 (Thu, 07 Jul 2011)

EllapsedTime: 35.6 seconds

RetCode: 0

Status:  OK

PackageFile: charm_1.5.5.tgz

PackageFileSize: 446.3 KiB

>>>>>>> 
>>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --library=charm.buildbin-libdir charm_1.5.5.tar.gz'
>>>>>>> 

* installing *source* package 'charm' ...
** R
** inst
** preparing package for lazy loading

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'browseVignettes()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation("pkgname")'.

Loading required package: mclust

by using mclust, invoked on its own or through another package,
you accept the license agreement in the mclust LICENSE file
and at http://www.stat.washington.edu/mclust/license.txt

Loading required package: nor1mix
Loading required package: spam
Package 'spam' is loaded. Spam version 0.23-0 (2010-09-01).
Type demo( spam) for some demos, help( Spam) for an overview
of this package.
Help for individual functions is optained by adding the
suffix '.spam' to the function name, e.g. 'help(chol.spam)'.

Attaching package: 'spam'

The following object(s) are masked from 'package:base':

    backsolve, forwardsolve, norm

 Use help(fields) for an overview of this library

library( fields, keep.source=TRUE) retains comments in the source code.

Copyright 2004-2011, Licensed under GPL, www.gpl.org/licenses/gpl.html 
Warning: 'DESCRIPTION' file has 'Encoding' field and re-encoding is not possible
Loading package bit1.1-7

package:bit (c) 2008/2009 Jens Oehlschlaegel (GPL-2)

creators: bit bitwhich

coercion: as.logical as.integer as.bit as.bitwhich which

operator: ! & | xor != == 

querying: print length any all min max range sum summary

bit access: length<- [ [<- [[ [[<-

for more help type ?bit

Warning: 'DESCRIPTION' file has 'Encoding' field and re-encoding is not possible
Loading package ff2.2-2
- getOption("fftempdir")=="/tmp/Rtmp1qxUdU"

- getOption("ffextension")=="ff"

- getOption("ffdrop")==TRUE

- getOption("fffinonexit")==TRUE

- getOption("ffpagesize")==65536

- getOption("ffcaching")=="mmnoflush"  -- consider "ffeachflush" if your system stalls on large writes

- getOption("ffbatchbytes")==16777216 -- consider a different value for tuning your system

- getOption("ffmaxbytes")==536870912 -- consider a different value for tuning your system

** help
*** installing help indices
** building package indices ...
*** tangling vignette sources ...
   'charm.Rnw' 
** testing if installed package can be loaded

by using mclust, invoked on its own or through another package,
you accept the license agreement in the mclust LICENSE file
and at http://www.stat.washington.edu/mclust/license.txt

Welcome to charm version 1.5.5
Warning messages:
1: 'DESCRIPTION' file has 'Encoding' field and re-encoding is not possible 
2: 'DESCRIPTION' file has 'Encoding' field and re-encoding is not possible 

* DONE (charm)