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Package 402/479HostnameOS / ArchBUILDCHECKBUILD BIN
ROC 1.29.0
Vince Carey
Snapshot Date: 2011-07-06 19:21:50 -0700 (Wed, 06 Jul 2011)
URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/ROC
Last Changed Rev: 54802 / Revision: 56603
Last Changed Date: 2011-04-13 15:36:43 -0700 (Wed, 13 Apr 2011)
wilson2 Linux (openSUSE 11.4) / x86_64  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK  OK  OK 
gewurz Windows Server 2008 R2 Enterprise (64-bit) / x64  OK  OK  OK 
moscato1 Windows Server 2008 R2 Enterprise (64-bit) / x64  OK [ OK ] OK 
pitt Mac OS X Leopard (10.5.8) / i386  OK  OK  OK 

Summary

Package: ROC
Version: 1.29.0
Command: mkdir ROC.buildbin-libdir && D:\biocbld\bbs-2.9-bioc\R\bin\R.exe CMD INSTALL --build --merge-multiarch --library=ROC.buildbin-libdir ROC_1.29.0.tar.gz >ROC-install.out 2>&1 && D:\biocbld\bbs-2.9-bioc\R\bin\R.exe CMD check --library=ROC.buildbin-libdir --install="check:ROC-install.out" --force-multiarch --no-vignettes --timings ROC_1.29.0.tar.gz && mv ROC.buildbin-libdir/* ROC.Rcheck/ && rmdir ROC.buildbin-libdir
StartedAt: 2011-07-07 06:10:35 -0700 (Thu, 07 Jul 2011)
EndedAt: 2011-07-07 06:11:20 -0700 (Thu, 07 Jul 2011)
EllapsedTime: 44.8 seconds
RetCode: 0
Status:  OK  
CheckDir: ROC.Rcheck
Warnings: 0

Command output

* using log directory 'D:/biocbld/bbs-2.9-bioc/meat/ROC.Rcheck'
* using R version 2.14.0 Under development (unstable) (2011-06-20 r56188)
* using platform: i386-pc-mingw32 (32-bit)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'ROC/DESCRIPTION' ... OK
* this is package 'ROC' version '1.29.0'
* checking package name space information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'ROC' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* loading checks for arch 'i386'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the name space can be loaded with stated dependencies ... OK
** checking whether the name space can be unloaded cleanly ... OK
* loading checks for arch 'x64'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the name space can be loaded with stated dependencies ... OK
** checking whether the name space can be unloaded cleanly ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
prepare_Rd: AUC.Rd:38-39: Dropping empty section \value
prepare_Rd: AUC.Rd:48: Dropping empty section \note
prepare_Rd: rocdemo.sca.Rd:38: Dropping empty section \note
prepare_Rd: rocdemo.sca.Rd:36: Dropping empty section \references
prepare_Rd: trapezint.Rd:23: Dropping empty section \note
prepare_Rd: trapezint.Rd:22: Dropping empty section \author
prepare_Rd: trapezint.Rd:21: Dropping empty section \references
prepare_Rd: trapezint.Rd:24: Dropping empty section \seealso
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking examples ...
** running examples for arch 'i386' ... OK
** running examples for arch 'x64' ... OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in 'inst/doc' ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignettes ... SKIPPED
* checking PDF version of manual ... OK

ROC.Rcheck/00install.out:


install for i386

* installing *source* package 'ROC' ...
** libs
g++  -I"D:/biocbld/BBS-2˜1.9-B/R/include"          -O2 -Wall  -mtune=core2 -c ROC.cc -o ROC.o
g++ -shared -s -static-libgcc -o ROC.dll tmp.def ROC.o -LD:/biocbld/BBS-2˜1.9-B/R/bin/i386 -lR
installing to D:/biocbld/bbs-2.9-bioc/meat/ROC.buildbin-libdir/ROC/libs/i386
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices ...
*** tangling vignette sources ...
   'ROCnotes.Rnw' 
** testing if installed package can be loaded

add DLL for x64

* installing *source* package 'ROC' ...
** libs
x86_64-w64-mingw32-g++  -I"D:/biocbld/BBS-2˜1.9-B/R/include"          -O2 -Wall  -mtune=core2 -c ROC.cc -o ROC.o
x86_64-w64-mingw32-g++ -shared -s -static-libgcc -o ROC.dll tmp.def ROC.o -LD:/biocbld/BBS-2˜1.9-B/R/bin/x64 -lR
installing to D:/biocbld/bbs-2.9-bioc/meat/ROC.buildbin-libdir/ROC/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'ROC' as ROC_1.29.0.zip

* DONE (ROC)

ROC.Rcheck/ROC-Ex.timings:

nameusersystemelapsed
AUC0.010.000.02
plot-methods0.020.000.02
rocc-class000
rocdemo.sca3.540.003.54
trapezint0.020.000.01