Package: CGHnormaliter

Version: 1.7.0

Command: mkdir CGHnormaliter.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh CGHnormaliter_1.7.0.tar.gz /Library/Frameworks/R.framework/Versions/2.14/Resources/bin/R CGHnormaliter.buildbin-libdir

StartedAt: 2011-06-22 06:05:28 -0700 (Wed, 22 Jun 2011)

EndedAt: 2011-06-22 06:05:38 -0700 (Wed, 22 Jun 2011)

EllapsedTime: 10.0 seconds

RetCode: 0

Status:  OK

PackageFile: CGHnormaliter_1.7.0.tgz

PackageFileSize: 960.7 KiB

>>>>>>> 
>>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --library=CGHnormaliter.buildbin-libdir CGHnormaliter_1.7.0.tar.gz'
>>>>>>> 

* installing *source* package ‘CGHnormaliter’ ...
** R
** data
** inst
** preparing package for lazy loading
Loading required package: impute
Loading required package: DNAcopy

**************************************************************************
   The plan to change the data format for CNA object has been postponed   
 in order to ensure backward compatibility with older versions of DNAcopy 
**************************************************************************

Loading required package: Biobase

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'browseVignettes()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation("pkgname")'.

Loading required package: CGHbase
Loading required package: marray
Loading required package: limma

Attaching package: ‘CGHcall’

The following object(s) are masked from ‘package:CGHbase’:

    bpend, bpstart, calls, calls<-, chromosomes, copynumber,
    copynumber<-, probamp, probamp<-, probgain, probgain<-, probloss,
    probloss<-, probnorm, probnorm<-, segmented, segmented<-

** help
*** installing help indices
** building package indices ...
*** tangling vignette sources ...
   ‘CGHnormaliter.Rnw’ 
Warning: value of 'results' option should be lowercase
Warning: value of 'results' option should be lowercase
** testing if installed package can be loaded

* DONE (CGHnormaliter)