Package: dressCheck

Version: 0.1.2

Command: /home/biocbuild/bbs-2.8-bioc/R/bin/R CMD check --no-vignettes --timings dressCheck_0.1.2.tar.gz

StartedAt: 2011-10-19 00:56:05 -0700 (Wed, 19 Oct 2011)

EndedAt: 2011-10-19 00:56:33 -0700 (Wed, 19 Oct 2011)

EllapsedTime: 27.5 seconds

RetCode: 0

Status:  OK

CheckDir: dressCheck.Rcheck

Warnings: 0

* using log directory ‘/loc/home/biocbuild/bbs-2.8-data-experiment/meat/dressCheck.Rcheck’
* using R version 2.13.2 (2011-09-30)
* using platform: x86_64-unknown-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘dressCheck/DESCRIPTION’ ... OK
* this is package ‘dressCheck’ version ‘0.1.2’
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package ‘dressCheck’ can be installed ... OK
* checking installed package size ... NOTE
  installed size is 66.0Mb
  sub-directories of 1Mb or more:
    sampleRemap  11.2Mb
    data         54.4Mb
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking Rd files ... NOTE
prepare_Rd: DrAsGiven.Rd:69-71: Dropping empty section \details
prepare_Rd: DrAsGiven.Rd:72-74: Dropping empty section \source
prepare_Rd: DrAsGiven.Rd:75-77: Dropping empty section \references
prepare_Rd: E2F3sig.probes.Rd:16-18: Dropping empty section \details
prepare_Rd: E2F3sig.probes.Rd:19-21: Dropping empty section \source
prepare_Rd: E2F3sig.probes.Rd:22-24: Dropping empty section \references
prepare_Rd: Src.probes.Rd:17-19: Dropping empty section \details
prepare_Rd: Src.probes.Rd:20-22: Dropping empty section \source
prepare_Rd: Src.probes.Rd:23-25: Dropping empty section \references
prepare_Rd: c119.Rd:97-99: Dropping empty section \source
prepare_Rd: c119.Rd:100-102: Dropping empty section \references
prepare_Rd: corrp116.Rd:71-73: Dropping empty section \details
prepare_Rd: corrp116.Rd:74-76: Dropping empty section \source
prepare_Rd: corrp116.Rd:77-79: Dropping empty section \references
prepare_Rd: e2f3Wts.Rd:19-21: Dropping empty section \details
prepare_Rd: e2f3Wts.Rd:22-24: Dropping empty section \source
prepare_Rd: e2f3Wts.Rd:25-27: Dropping empty section \references
prepare_Rd: platsigprobes.Rd:17-19: Dropping empty section \details
prepare_Rd: platsigprobes.Rd:20-22: Dropping empty section \source
prepare_Rd: platsigprobes.Rd:23-25: Dropping empty section \references
prepare_Rd: pwLines.Rd:127-129: Dropping empty section \details
prepare_Rd: pwLines.Rd:130-132: Dropping empty section \source
prepare_Rd: pwLines.Rd:133-135: Dropping empty section \references
prepare_Rd: srcWts.Rd:19-21: Dropping empty section \details
prepare_Rd: srcWts.Rd:22-24: Dropping empty section \source
prepare_Rd: srcWts.Rd:25-27: Dropping empty section \references
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking examples ... OK
* checking for unstated dependencies in vignettes ... NOTE
'library' or 'require' calls not declared from:
  chron survival
* checking package vignettes in ‘inst/doc’ ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignettes ... SKIPPED
* checking PDF version of manual ... OK

* installing *source* package ‘dressCheck’ ...
** data
** inst
** help
*** installing help indices
** building package indices ...
** testing if installed package can be loaded

* DONE (dressCheck)

name	user	system	elapsed
DrAsGiven	1.320	0.056	1.378
E2F3sig.probes	0.004	0.000	0.002
Src.probes	0.000	0.004	0.002
c119	2.264	0.152	2.424
corrp116	1.292	0.012	1.306
e2f3Wts	0.000	0.000	0.002
platsigprobes	0.000	0.000	0.002
pwLines	2.708	0.080	2.791
srcWts	0.008	0.000	0.002