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ceuhm3 0.0.10
VJ Carey
Snapshot Date: 2011-10-18 23:15:16 -0700 (Tue, 18 Oct 2011)
URL: https://hedgehog.fhcrc.org/bioc-data/trunk/experiment/pkgs/ceuhm3
Last Changed Rev: 1730 / Revision: 1763
Last Changed Date: 2011-10-01 03:31:47 -0700 (Sat, 01 Oct 2011)
lamb1 Linux (openSUSE 11.3) / x86_64  OK  OK 
gewurz Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64  OK  OK  OK 
pelham Mac OS X Leopard (10.5.8) / i386  OK [ OK ] OK 

Summary

Package: ceuhm3
Version: 0.0.10
Command: /Library/Frameworks/R.framework/Versions/2.13/Resources/bin/R CMD check --no-vignettes --timings --no-multiarch ceuhm3_0.0.10.tar.gz
StartedAt: 2011-10-19 01:09:10 -0700 (Wed, 19 Oct 2011)
EndedAt: 2011-10-19 01:12:27 -0700 (Wed, 19 Oct 2011)
EllapsedTime: 196.6 seconds
RetCode: 0
Status:  OK 
CheckDir: ceuhm3.Rcheck
Warnings: 0

Command output

* using log directory '/Users/biocbuild/bbs-2.8-data-experiment/meat/ceuhm3.Rcheck'
* using R version 2.13.2 (2011-09-30)
* using platform: i386-apple-darwin9.8.0 (32-bit)
* using session charset: ASCII
* using option '--no-vignettes'
* checking for file 'ceuhm3/DESCRIPTION' ... OK
* this is package 'ceuhm3' version '0.0.10'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'ceuhm3' can be installed ... OK
* checking installed package size ... NOTE
  installed size is 56.4Mb
  sub-directories of 1Mb or more:
    data   37.2Mb
    parts  19.1Mb
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking examples ... OK
* checking PDF version of manual ... OK

ceuhm3.Rcheck/00install.out:

* installing *source* package 'ceuhm3' ...
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices ...
** testing if installed package can be loaded
To get a tailored smlSet, use getSS("ceuhm3", [chrvec]) 
available chromosomes are named  chr1 chr10 ... chr8 chr9 

* DONE (ceuhm3)

ceuhm3.Rcheck/ceuhm3-Ex.timings:

nameusersystemelapsed
ceuhm3-package16.181 0.53717.282