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Neve2006 0.1.10
VJ Carey
Snapshot Date: 2010-11-12 00:25:07 -0800 (Fri, 12 Nov 2010)
URL: https://hedgehog.fhcrc.org/bioc-data/trunk/experiment/pkgs/Neve2006
Last Changed Rev: 1375 / Revision: 1384
Last Changed Date: 2010-10-21 09:43:05 -0700 (Thu, 21 Oct 2010)
lamb1 Linux (openSUSE 11.3) / x86_64  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK [ OK ] OK 
pelham Mac OS X Leopard (10.5.8) / i386  OK  OK  OK 

Summary

Package: Neve2006
Version: 0.1.10
Command: E:\biocbld\bbs-2.8-bioc\R\bin\R.exe CMD check --no-vignettes --timings Neve2006_0.1.10.tar.gz
StartedAt: 2010-11-12 04:31:51 -0800 (Fri, 12 Nov 2010)
EndedAt: 2010-11-12 04:33:34 -0800 (Fri, 12 Nov 2010)
EllapsedTime: 102.6 seconds
RetCode: 0
Status:  OK  
CheckDir: Neve2006.Rcheck
Warnings: 0

Command output

* using log directory 'E:/biocbld/bbs-2.8-data-experiment/meat/Neve2006.Rcheck'
* using R version 2.13.0 Under development (unstable) (2010-11-10 r53547)
* using platform: i386-pc-mingw32 (32-bit)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'Neve2006/DESCRIPTION' ... OK
* this is package 'Neve2006' version '0.1.10'
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'Neve2006' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking data for non-ASCII characters ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... SKIPPED
* checking PDF version of manual ... OK

Neve2006.Rcheck/00install.out:

* installing *source* package 'Neve2006' ...
** R
** data
** inst
** preparing package for lazy loading

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

Loading required package: AnnotationDbi
Loading required package: org.Hs.eg.db
Loading required package: DBI
** help
*** installing help indices
** building package indices ...
** testing if installed package can be loaded

* DONE (Neve2006)

Neve2006.Rcheck/Neve2006-Ex.timings:

nameusersystemelapsed
cghExSet-class0.570.000.59
logRatios0.060.000.06
neveCGHmatch0.600.020.64