iSeq 1.1.1
Qianxing Mo
| Snapshot Date: 2011-03-17 11:16:30 -0700 (Thu, 17 Mar 2011) | | URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/iSeq | | Last Changed Rev: 50641 / Revision: 53825 | | Last Changed Date: 2010-11-02 15:11:15 -0700 (Tue, 02 Nov 2010) |
| lamb1 | Linux (openSUSE 11.3) / x86_64 | OK | OK | |
| liverpool | Windows Server 2003 R2 (32-bit) / x64 | OK | OK | OK |
| gewurz | Windows Server 2008 R2 Enterprise (64-bit) / x64 | OK | OK | OK |
| pelham | Mac OS X Leopard (10.5.8) / i386 | OK | OK | OK |
| petty | Mac OS X Snow Leopard (10.6.6) / i386 | OK | OK | [ OK ] |
>>>>>>>
>>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --library=iSeq.buildbin-libdir iSeq_1.1.1.tar.gz'
>>>>>>>
* installing *source* package 'iSeq' ...
** libs
*** arch - i386
gcc -arch i386 -std=gnu99 -I/Library/Frameworks/R.framework/Versions/2.13/Resources/include -I/Library/Frameworks/R.framework/Versions/2.13/Resources/include/i386 -I/usr/local/include -fPIC -g -O2 -Wall -pedantic -c iSeq.c -o iSeq.o
iSeq.c: In function 'iSeq1':
iSeq.c:208: warning: unused variable 'j'
iSeq.c: In function 'subBkg':
iSeq.c:507: warning: suggest parentheses around comparison in operand of &
gcc -arch i386 -std=gnu99 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o iSeq.so iSeq.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Users/biocbuild/bbs-2.8-bioc/meat/iSeq.buildbin-libdir/iSeq/libs/i386
*** arch - ppc
gcc -arch ppc -std=gnu99 -I/Library/Frameworks/R.framework/Versions/2.13/Resources/include -I/Library/Frameworks/R.framework/Versions/2.13/Resources/include/ppc -I/usr/local/include -fPIC -g -O2 -Wall -pedantic -c iSeq.c -o iSeq.o
iSeq.c: In function 'iSeq1':
iSeq.c:208: warning: unused variable 'j'
iSeq.c: In function 'subBkg':
iSeq.c:507: warning: suggest parentheses around comparison in operand of &
gcc -arch ppc -std=gnu99 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o iSeq.so iSeq.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Users/biocbuild/bbs-2.8-bioc/meat/iSeq.buildbin-libdir/iSeq/libs/ppc
*** arch - x86_64
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Versions/2.13/Resources/include -I/Library/Frameworks/R.framework/Versions/2.13/Resources/include/x86_64 -I/usr/local/include -fPIC -g -O2 -Wall -pedantic -c iSeq.c -o iSeq.o
iSeq.c: In function 'iSeq1':
iSeq.c:208: warning: unused variable 'j'
iSeq.c: In function 'subBkg':
iSeq.c:507: warning: suggest parentheses around comparison in operand of &
gcc -arch x86_64 -std=gnu99 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o iSeq.so iSeq.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Users/biocbuild/bbs-2.8-bioc/meat/iSeq.buildbin-libdir/iSeq/libs/x86_64
** R
** data
** moving datasets to lazyload DB
** demo
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices ...
** testing if installed package can be loaded
* DONE (iSeq)
>>>>>>>
>>>>>>> FIXING LINKS FOR iSeq.buildbin-libdir/iSeq/libs/i386/iSeq.so
>>>>>>>
install_name_tool -change "/usr/local/lib/libgcc_s.1.dylib" "/Library/Frameworks/R.framework/Versions/2.13/Resources/lib/libgcc_s.1.dylib" "iSeq.buildbin-libdir/iSeq/libs/i386/iSeq.so"
install_name_tool -change "/usr/local/lib/libgfortran.2.dylib" "/Library/Frameworks/R.framework/Versions/2.13/Resources/lib/libgfortran.2.dylib" "iSeq.buildbin-libdir/iSeq/libs/i386/iSeq.so"
install_name_tool -change "/usr/local/lib/libreadline.5.2.dylib" "/Library/Frameworks/R.framework/Versions/2.13/Resources/lib/libreadline.5.2.dylib" "iSeq.buildbin-libdir/iSeq/libs/i386/iSeq.so"
install_name_tool -change "/usr/local/lib/libreadline.dylib" "/Library/Frameworks/R.framework/Versions/2.13/Resources/lib/libreadline.dylib" "iSeq.buildbin-libdir/iSeq/libs/i386/iSeq.so"
>>>>>>>
>>>>>>> FIXING LINKS FOR iSeq.buildbin-libdir/iSeq/libs/ppc/iSeq.so
>>>>>>>
install_name_tool -change "/usr/local/lib/libgcc_s.1.dylib" "/Library/Frameworks/R.framework/Versions/2.13/Resources/lib/libgcc_s.1.dylib" "iSeq.buildbin-libdir/iSeq/libs/ppc/iSeq.so"
install_name_tool -change "/usr/local/lib/libgfortran.2.dylib" "/Library/Frameworks/R.framework/Versions/2.13/Resources/lib/libgfortran.2.dylib" "iSeq.buildbin-libdir/iSeq/libs/ppc/iSeq.so"
install_name_tool -change "/usr/local/lib/libreadline.5.2.dylib" "/Library/Frameworks/R.framework/Versions/2.13/Resources/lib/libreadline.5.2.dylib" "iSeq.buildbin-libdir/iSeq/libs/ppc/iSeq.so"
install_name_tool -change "/usr/local/lib/libreadline.dylib" "/Library/Frameworks/R.framework/Versions/2.13/Resources/lib/libreadline.dylib" "iSeq.buildbin-libdir/iSeq/libs/ppc/iSeq.so"
>>>>>>>
>>>>>>> FIXING LINKS FOR iSeq.buildbin-libdir/iSeq/libs/x86_64/iSeq.so
>>>>>>>
install_name_tool -change "/usr/local/lib/libgcc_s.1.dylib" "/Library/Frameworks/R.framework/Versions/2.13/Resources/lib/libgcc_s.1.dylib" "iSeq.buildbin-libdir/iSeq/libs/x86_64/iSeq.so"
install_name_tool -change "/usr/local/lib/libgfortran.2.dylib" "/Library/Frameworks/R.framework/Versions/2.13/Resources/lib/libgfortran.2.dylib" "iSeq.buildbin-libdir/iSeq/libs/x86_64/iSeq.so"
install_name_tool -change "/usr/local/lib/libreadline.5.2.dylib" "/Library/Frameworks/R.framework/Versions/2.13/Resources/lib/libreadline.5.2.dylib" "iSeq.buildbin-libdir/iSeq/libs/x86_64/iSeq.so"
install_name_tool -change "/usr/local/lib/libreadline.dylib" "/Library/Frameworks/R.framework/Versions/2.13/Resources/lib/libreadline.dylib" "iSeq.buildbin-libdir/iSeq/libs/x86_64/iSeq.so"