beadarray 2.0.6
Mark Dunning
| Snapshot Date: 2011-03-30 23:22:56 -0700 (Wed, 30 Mar 2011) | | URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_7/madman/Rpacks/beadarray | | Last Changed Rev: 53565 / Revision: 54281 | | Last Changed Date: 2011-03-10 02:48:20 -0800 (Thu, 10 Mar 2011) |
| lamb2 | Linux (openSUSE 11.2) / x86_64 | OK | OK | |
| liverpool | Windows Server 2003 R2 (32-bit) / x64 | OK | OK | OK |
| gewurz | Windows Server 2008 R2 Enterprise (64-bit) / x64 | OK | OK | [ OK ] |
| pelham | Mac OS X Leopard (10.5.8) / i386 | OK | OK | OK |
* installing *source* package 'beadarray' ...
Using auto-selected zip option '--use-zip-data'
** libs
x86_64-w64-mingw32-gcc -I"D:/biocbld/bbs-2.7-bioc/R/include" -O2 -Wall -std=gnu99 -c BASH.c -o BASH.o
x86_64-w64-mingw32-gcc -I"D:/biocbld/bbs-2.7-bioc/R/include" -O2 -Wall -std=gnu99 -c HULK.c -o HULK.o
x86_64-w64-mingw32-gcc -I"D:/biocbld/bbs-2.7-bioc/R/include" -O2 -Wall -std=gnu99 -c determiningGridPositions.c -o determiningGridPositions.o
determiningGridPositions.c: In function 'roundLocsFileValues':
determiningGridPositions.c:7:12: warning: unused variable 'vecLength'
x86_64-w64-mingw32-gcc -I"D:/biocbld/bbs-2.7-bioc/R/include" -O2 -Wall -std=gnu99 -c findAllOutliers.c -o findAllOutliers.o
findAllOutliers.c: In function 'findBeadStatus':
findAllOutliers.c:161:9: warning: 'm' may be used uninitialized in this function
findAllOutliers.c:161:12: warning: 'ma' may be used uninitialized in this function
findAllOutliers.c: In function 'findAllOutliers':
findAllOutliers.c:234:20: warning: 'status' may be used uninitialized in this function
x86_64-w64-mingw32-gcc -I"D:/biocbld/bbs-2.7-bioc/R/include" -O2 -Wall -std=gnu99 -c imageProcessing.c -o imageProcessing.o
imageProcessing.c: In function 'illuminaBackground':
imageProcessing.c:68:35: warning: statement with no effect
imageProcessing.c:70:0: warning: ignoring #pragma omp parallel
imageProcessing.c:51:9: warning: unused variable 'tmp'
imageProcessing.c:49:48: warning: unused variable 'k'
imageProcessing.c:49:45: warning: unused variable 'j'
imageProcessing.c: In function 'illuminaSharpen':
imageProcessing.c:166:0: warning: ignoring #pragma omp parallel
imageProcessing.c:168:0: warning: ignoring #pragma omp for
imageProcessing.c:175:0: warning: ignoring #pragma omp for
imageProcessing.c:154:22: warning: unused variable 'chunk'
imageProcessing.c:154:12: warning: unused variable 'nthreads'
imageProcessing.c:154:7: warning: unused variable 'tid'
x86_64-w64-mingw32-gcc -shared -s -static-libgcc -o beadarray.dll tmp.def BASH.o HULK.o determiningGridPositions.o findAllOutliers.o imageProcessing.o -LD:/biocbld/bbs-2.7-bioc/R/bin/x64 -lR
installing to D:/biocbld/bbs-2.7-bioc/meat/beadarray.buildbin-libdir/beadarray/libs/x64
** R
** data
** inst
** preparing package for lazy loading
Welcome to Bioconductor
Vignettes contain introductory material. To view, type
'openVignette()'. To cite Bioconductor, see
'citation("Biobase")' and for packages 'citation(pkgname)'.
Creating a new generic function for "boxplot" in "beadarray"
** help
*** installing help indices
** building package indices ...
** testing if installed package can be loaded
Welcome to beadarray version 2.0.6
There have been major changes to beadarray since Bioconductor 2.6 (April 2010). Please see package vignette for details
* MD5 sums
packaged installation of 'beadarray' as beadarray_2.0.6.zip
* DONE (beadarray)