BioC experimental data: CHECK report for PathNetData on zin1

Package: PathNetData

Version: 0.99.3

Command: /home/biocbuild/bbs-2.13-bioc/R/bin/R CMD check --no-vignettes --timings PathNetData_0.99.3.tar.gz

StartedAt: 2014-04-04 09:35:44 -0700 (Fri, 04 Apr 2014)

EndedAt: 2014-04-04 09:35:59 -0700 (Fri, 04 Apr 2014)

EllapsedTime: 14.3 seconds

RetCode: 0

Status:  OK

CheckDir: PathNetData.Rcheck

Warnings: 0

* using log directory ‘/home/biocbuild/bbs-2.13-data-experiment/meat/PathNetData.Rcheck’
* using R version 3.0.3 (2014-03-06)
* using platform: x86_64-unknown-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘PathNetData/DESCRIPTION’ ... OK
* this is package ‘PathNetData’ version ‘0.99.3’
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘PathNetData’ can be installed ... [1s/1s] OK
* checking installed package size ... NOTE
  installed size is 17.6Mb
  sub-directories of 1Mb or more:
    data      1.4Mb
    extdata  16.2Mb
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking examples ... [1s/1s] OK
* checking PDF version of manual ... OK

NOTE: There was 1 note.
See
  ‘/home/biocbuild/bbs-2.13-data-experiment/meat/PathNetData.Rcheck/00check.log’
for details.

* installing *source* package ‘PathNetData’ ...
** data
** inst
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded
* DONE (PathNetData)

name	user	system	elapsed
A	0.196	0.020	0.216
brain_regions	0.016	0.000	0.016
disease_progression	0.004	0.004	0.008
pathway	0.012	0.000	0.011