Evolutionary Algorithm

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Documentation for package ‘evola’ version 1.0.7

• DESCRIPTION file.
• User guides, package vignettes and other documentation.

Help Pages

addZeros	Function to add zeros before and after a numeric vector to have the same number of characters.
bestSol	Extract the index of the best solution
drift	Drift of positive allele calculation
evola	*EVOL*utionary *A*lgorithm
evolafit	Fits a genetic algorithm for a set of traits and constraints.
evolaPop	Genetic algorithm pop
evolaPop-class	Genetic algorithm pop
evolmonitor	plot the change of values across iterations
freqPosAllele	Extract frequency of positive alleles
importHaploSparse	Import haplotypes
inbFun	Fitness function from contribution theory using only the group relationship
Jc	Matrix of ones
Jr	Matrix of ones
nQtl	Matrix of number of activated QTLs
ocsFun	Fitness function from contribution theory
ocsFunC	Fitness function from contribution theory
pareto	plot the change of values across iterations
regFun	Fitness function from linear regressions based on mean squared error.
summary.Pop	summary form an evolafit model
update.evolaFitMod	update form an evolafit model
varQ	Extract the variance existing in the genome solutions