pdbHelix
Usage
Usage: pdbHelix
Options:
[-i[nput] In (NULL ).as(inFile ) ] :Essential :InputDataFile
[-o[utput] Out (NULL ).as(outFile ) ] :Optional :OutputDataFile
[-3[D] Out3D (NULL ).as(outFile ) ] :Optional :OutputDataFile(3D-mrc)
[-2[D] Out2D (NULL ).as(outFile ) ] :Optional :OutputDataFile(2D-mrc projection(y-z))
[-d[elta] delta (5 ).as(Real ) ] :Optional :delta[A](mrc-file)
[-p[delphi] delphi (165 ).as(Real ) ] :Essential :deltaPhi
[-dp[delphi] deldelphi (5 ).as(Real ) ] :Optional :deltaDeltaPhi
[-z[deltaz] delz (5 ).as(Real ) ] :Essential :deltaz
[-n[Molecule] nMolecule (1 ).as(Integer ) ] :Essential :NumberOfMolecules
[-nx nx (1 ).as(Integer ) ] :Optional :Pixel[Def:]
[-ny ny (1 ).as(Integer ) ] :Optional :Pixel[Def:]
[-nz nz (1 ).as(Integer ) ] :Optional :Pixel[Def:]
[-Sx[tart] Startx (0.0 ).as(Real ) ] :Optional :Startx[A]
[-Sy[tart] Starty (0.0 ).as(Real ) ] :Optional :Starty[A]
[-Sz[tart] Startz (0.0 ).as(Real ) ] :Optional :Startz[A]
[-w[eight] Weight (1.0 ).as(Real ) ] :Optional :Weight
[-dx dx (2.5 ).as(Real ) ] :Optional :dx
[-dy dy (2.5 ).as(Real ) ] :Optional :dy
[-dz dz (2.5 ).as(Real ) ] :Optional :dz
[-startn startn (0 ).as(Integer ) ] :Optional :start molecule's index
[-startC startID (A ).as(Character ) ] :Optional :start chain ID
[-deltaSeq deltaSeq (1000 ).as(Integer ) ] :Optional :start chain ID
[-c[onfig] configFile (NULL ).as(inFile ) ] :Optional :ConfigurationFile
[-m[ode] mode (0 ).as(Integer ) ] :Optional :Mode