Concept
mrcImage.h
Data Structure
Member Function
- Momory Control for mrcImage
- File Control for mrcImage-formatted file
- mrcFileRead
- mrcHeaderRead and mrcImageRead
- No initialization is required.
- mrcImageRead
- Read image following header information
- mrcHeaderRead
- mrcFileWrite
- Subtration : in lmrcImageSubtraction.c
- lmrcImageSubtraction(mrcImage* out, mrcImage* in, double value);
- out := in - value
- lmrcImageMeanSubtraction(mrcImage* out, mrcImage* in);
- out := in - mean of in
- lmrcImageMinSubtraction(mrcImage* out, mrcImage* in);
- out := in - min of in
- lmrcImageMaxSubtraction(mrcImage* out, mrcImage* in);
- out := in - max of in
- lmrcImageSubtractionCalc(mrcImage* out, mrcImage* in1, mrcImage* in2);
- out := in1 - in2
- Rotation : in lmrcImageRotation.c : mrcImage.h
- 3D: lmrcImageRotation3DFollowingEulerAngle
- Rotation of a 3D image
- 3D: lmrcImageRotation3DZXY
- Rotation ZXY of a 3D image
- 2D: lmrcImageRotation2D
- Rotation of a 2D image
- 2D: lmrcImageRotationPeriodicBoundary
- Rotation of a 2D image
- Correlation : in lmrcImageCorrelation
- double lmrcImageEuclidDistanceCalc(mrcImage* in1, mrcImage* in2, int mode)
- return Euclid Distnce
- 0: sigmai(in1i - in2i)2
- 1: sqrt(sigmai(in1i - in2i)2)
- 2: the above number / pixelNumber;
-
- lmrcImageCorralation(mrcImage* out, mrcImage* in, mrcImage* ref, long mode);
-
- void lmrcImageCorrelationRefinement(mrcImage* out, mrcImage* shift,
mrcImage* in, mrcImage* ref,
lmrcImageCorrelationRefinementInfo* info, long mode)
- While two images are shifted in Fourier space, i.e. phase shift,
the best match is searched.
- double lmrcImageLinearCorrelation(mrcImage* in1, mrcImage* in2, long mode)
- Calculate the linear correlation, i.e. statistical correlation
- void lmrcImageAutoRotationCorrelation(mrcImage* out, mrcImage* cor,
mrcImage* in, mrcImage* ref,
lmrcImageAutoRotationCorrelationInfo* linfo, int mode)
- While a reference image is rotated, lmrcImageCorrelation is used.
- void lmrcImageAutoRotationCorrelationRotationalCrossCorrelationFunction(
mrcImage* out, mrcImage* cor,
mrcImage* in, mrcImage* ref,
lmrcImageAutoRotationCorrelationInfo* linfo, int mode)
- After two images are tranformed from Descartes into Polar coordinates,
lmrcImageCorrelation is used.
- void lmrcImageAutoRotationCorretionForManyReferences(mrcImage* in, mrcImage* ref,
lmrcImageAutoRotationCorrelationForManyReferencesInfo* info,
lmrcImageAutoRotationCorrelationInfo* linfo,
int mode)
- Auto Rotational correlation for many references.
- Classifilcation
- ClusterAnalysis
- lmrcImageClusterAnalysis
- lmrcImageClusterAnalysisByIteration
- lmrcImageDistanceCalc
- lmrcImageDistanceCalc0
- Interface method for DistanceCalc
- lmrcImageDistanceCalc
- lmrcImageDistanceCalcWithAutoRotation
- lmrcImageDistanceCalcByWardMethod
- lmrcImageDistanceCalcByWardMethodWithAutoRotation
- lmrcImageClusterMerge
- lmrcImageClusterAnalysisDistanceToLog(FILE* fpt, ...);
- Output the log file during analysis