Package Download_score pd.rg.u34a 32 BSgenome.Hsapiens.UCSC.hg19 2860 org.MeSH.Cin.db 3 pd.plasmodium.anopheles 30 pd.zebrafish 30 hthgu133bprobe 33 org.MeSH.Eco.E24377A.db 4 org.MeSH.Ptr.db 4 org.MeSH.Bta.db 4 illuminaMousev1p1.db 35 org.MeSH.Miy.db 4 pd.cytogenetics.array 44 mirna20cdf 31 hthgu133b.db 36 org.Gg.eg.db 497 human370quadv3cCrlmm 29 TxDb.Mmusculus.UCSC.mm10.knownGene 1401 mgu74acdf 31 IlluminaHumanMethylation27kmanifest 38 pd.celegans 34 hgu95av2.db 722 hom.Dr.inp.db 18 mu11ksubb.db 34 pd.wheat 40 BSgenome.Scerevisiae.UCSC.sacCer1 142 pd.hg.u133b 34 mouse430a2frmavecs 20 ygs98cdf 34 rgu34b.db 38 bovinecdf 36 pd.soygene.1.1.st 47 pd.ragene.1.1.st.v1 40 pd.hu6800 48 hu6800subacdf 27 mogene20stprobeset.db 32 SNPlocs.Hsapiens.dbSNP.20100427 19 rgug4131a.db 36 org.MeSH.Mml.db 3 hgug4112a.db 81 TxDb.Scerevisiae.UCSC.sacCer2.sgdGene 30 m20kcod.db 31 mu11ksubbprobe 32 pd.aragene.1.0.st 31 pd.soybean 36 BSgenome.Drerio.UCSC.danRer5 41 pd.hg.focus 32 yeast2.db 59 pd.ovigene.1.1.st 36 MeSH.AOR.db 16 illuminaHumanv4.db 281 hgfocuscdf 63 mgug4121a.db 39 htratfocusprobe 33 ragene21stprobeset.db 32 org.MeSH.Eqc.db 3 mogene21stprobeset.db 35 pd.mouse430.2 54 org.Tgondii.eg.db 14 ragene20sttranscriptcluster.db 35 hgu133a2probe 40 rnu34.db 37 BSgenome.Drerio.UCSC.danRer6 41 BSgenome.Btaurus.UCSC.bosTau6 82 HsAgilentDesign026652.db 68 hugene21stprobeset.db 40 pd.drosgenome1 32 ygs98frmavecs 19 hgu95dprobe 30 BSgenome.Mmulatta.UCSC.rheMac3.masked 27 pd.xenopus.laevis 31 adme16cod.db 37 gahgu133plus2probe 14 drosophila2probe 150 huex10sttranscriptcluster.db 46 gahgu133plus2.db 16 org.Cf.eg.db 515 ecoli2cdf 31 JazaeriMetaData.db 39 htmg430pmprobe 33 pd.rice 42 gahgu95bprobe 16 pd.barley1 32 org.MeSH.Atu.K84.db 4 org.MeSH.Eco.55989.db 4 porcineprobe 35 pd.hg.u133.plus.2 254 hugene10stprobeset.db 49 pd.2006.07.18.mm8.refseq.promoter 32 pd.drosophila.2 30 canine2.db 42 org.MeSH.Ani.FGSC.db 3 humancytosnp12v2p1hCrlmm 29 ragene10stv1cdf 32 pd.rhesus 38 org.Mm.eg.db 8506 BSgenome.Dmelanogaster.UCSC.dm2 65 HuExExonProbesetLocation 32 BSgenome.Hsapiens.UCSC.hg18 273 BSgenome.Ptroglodytes.UCSC.panTro2.masked 24 org.MeSH.Rno.db 4 org.MeSH.Mtr.db 3 hgu133b.db 56 org.MeSH.Sau.COL.db 3 citrusprobe 32 SIFT.Hsapiens.dbSNP137 126 FDb.UCSC.snp137common.hg19 34 poplarprobe 32 mu19ksuba.db 34 IlluminaHumanMethylation450kanno.ilmn12.hg19 1533 pd.mouse430a.2 33 pd.mg.u74b 28 pd.ecoli.asv2 29 BSgenome.Sscrofa.UCSC.susScr3 38 pd.hg18.60mer.expr 55 KEGG.db 263 org.Bt.eg.db 538 org.Ce.eg.db 629 org.Dr.eg.db 1013 hugene11sttranscriptcluster.db 77 raex10stprobeset.db 34 org.MeSH.Cfa.db 3 ecoliasv2probe 33 plasmodiumanophelesprobe 30 mguatlas5k.db 34 hgug4111a.db 39 org.EcK12.eg.db 389 pd.hc.g110 30 canine.db 38 htmg430acdf 32 BSgenome.Celegans.UCSC.ce2 369 BSgenome.Dmelanogaster.UCSC.dm3 260 org.MeSH.Eco.536.db 3 mu11ksubaprobe 33 org.Ag.eg.db 309 pd.pae.g1a 30 TxDb.Athaliana.BioMart.plantsmart21 2 tomatocdf 27 hgu133aprobe 162 humanomni5quadv1bCrlmm 21 nugohs1a520180cdf 31 ath1121501probe 37 pd.ht.mg.430a 32 mouse4302cdf 136 drosophila2.db 42 mogene.1.0.st.v1frmavecs 19 hgfocus.db 53 gahgu95cprobe 15 hom.Rn.inp.db 23 hu35ksubbprobe 31 hwgcod.db 34 bsubtilisprobe 33 tomatoprobe 32 TxDb.Athaliana.BioMart.plantsmart16 6 hu6800subdcdf 29 pd.hg.u95b 29 hi16cod.db 31 canineprobe 31 ygs98.db 46 moe430bcdf 30 mogene11sttranscriptcluster.db 43 moe430bprobe 31 pd.sugar.cane 30 BSgenome.Rnorvegicus.UCSC.rn4 71 hgu133acdf 239 lumiMouseIDMapping 35 org.MeSH.Bsu.Bsn5.db 4 org.MeSH.Gma.db 3 MeSH.PCR.db 15 ratCHRLOC 24 BSgenome.Ptroglodytes.UCSC.panTro2 45 hgubeta7.db 39 soybeancdf 77 pd.rg.u34b 28 hom.Dm.inp.db 22 mogene21sttranscriptcluster.db 45 mgu74bv2cdf 31 org.MeSH.Dya.db 4 pd.cyngene.1.0.st 32 huex.1.0.st.v2frmavecs 31 hugene20sttranscriptcluster.db 66 mu6500subacdf 28 pd.mg.u74c 28 hugene.1.0.st.v1frmavecs 23 pd.rjpgene.1.1.st 27 mu19ksubccdf 28 worm.db0 49 hu35ksubaprobe 32 org.MeSH.Eco.SMS35.db 4 pd.rhegene.1.1.st 35 hgu219.db 93 org.MeSH.Pae.PA14.db 4 wheatcdf 34 rhesuscdf 32 gahgu133a.db 18 Roberts2005Annotation.db 34 pd.yg.s98 30 org.MeSH.Der.db 4 phastCons100way.UCSC.hg19 260 org.MeSH.Mmu.db 4 rnu34probe 28 h20kcod.db 33 org.MeSH.Cbr.db 4 BSgenome.Cfamiliaris.UCSC.canFam2 45 org.MeSH.Dda.3937.db 4 pd.charm.hg18.example 32 org.MeSH.Bsu.TUB10.db 3 MafDb.ESP6500SI.V2.SSA137.dbSNP138 4 org.MeSH.Syn.db 4 hu6800subbcdf 28 pd.mapping250k.nsp 200 oligoData 96 chimp.db0 47 canine2probe 34 humanomni258v1aCrlmm 2 gahgu133plus2cdf 18 org.MeSH.Bsu.168.db 4 hgu133a2frmavecs 22 ChemmineDrugs 59 mta10stprobeset.db 6 pd.elegene.1.1.st 24 pd.rusgene.1.1.st 32 pd.guigene.1.0.st 25 XtraSNPlocs.Hsapiens.dbSNP141.GRCh38 13 pd.chigene.1.1.st 35 pd.elegene.1.0.st 27 illuminaHumanv4BeadID.db 2 hs95av2hsentrezgcdf 1 drosophila2 2 illuminaMousev2BeadID.db 9 illuminaMousev1p1BeadID.db 6 illuminaRatv1BeadID.db 5 SNPlocs.Hsapiens.dbSNP.20080617 5 hsahomology 2 xlahomology 3 m20kcod 3 hs133bhsrefseq7cdf 1 hs133bptensg7cdf 1 TxDb.Hsapiens.UCSC.hg38.knownGene 2594 mogene10stv1.r3cdf 1 domainsignatures 0 mm74av1mmentrezgprobe 1 gahgu95d 1 hgu133b 2 ragene10stv1.r3cdf 1 hguatlas13k 2 hs133xhsrefseq7probe 1 yeast2 2 hu6800 2 ath1attair 2 hs133av2hsentrezg 1 btahomology 2 BSgenome.Hsapiens.NCBI.b36v3 1 gmahomology 2 hs133av2ptensg7cdf 1 cfcanine2cfense7cdf 1 org.MeSH.Sau.MW2.db 4 hom.Mm.inp.db 21 org.MeSH.Eco.O157.H7.EC4115.db 4 org.MeSH.Zma.db 3 org.MeSH.Dan.db 4 pd.mogene.2.0.st 59 FDb.UCSC.snp135common.hg19 32 riceprobe 37 org.MeSH.Oni.db 3 PANTHER.db 195 PFAM.db 682 hu35ksubbcdf 29 hu6800subccdf 29 zebrafishcdf 36 TxDb.Athaliana.BioMart.plantsmart14 5 BSgenome.Mmusculus.UCSC.mm10 1205 org.MeSH.Vvi.db 4 seqnames.db 8 pd.ht.hg.u133.plus.pm 39 hgu133atagcdf 57 rattoxfxprobe 28 soybeanprobe 31 hgu95av2probe 287 ragene10stv1probe 31 ecoliK12.db0 49 org.MeSH.Eco.O157.H7.EDL933.db 4 gahgu95av2probe 16 mouse4302probe 40 TxDb.Athaliana.BioMart.plantsmart10 8 hgu95av2cdf 362 hgu133plus2probe 126 TxDb.Hsapiens.UCSC.hg19.knownGene 4896 ecoliprobe 31 pd.rg.u34c 28 xenopus.db0 43 pd.equgene.1.0.st 29 mu11ksubacdf 30 hthgu133pluspmprobe 33 gahgu95av2cdf 14 pd.felgene.1.1.st 32 FDb.InfiniumMethylation.hg18 70 BSgenome.Tguttata.UCSC.taeGut1 32 yeast.db0 50 hgu95acdf 127 DO.db 1608 htrat230pmcdf 31 htrat230pmprobe 30 hthgu133pluspmcdf 48 pedbarrayv9.db 35 hu35ksubd.db 36 gp53cdf 30 RaExExonProbesetLocation 35 citruscdf 30 mouse.db0 63 bovine.db 40 nugomm1a520177cdf 27 MoExExonProbesetLocation 32 rae230aprobe 77 hu35ksubb.db 36 test3probe 31 cMAP 78 pd.genomewidesnp.6 225 org.MeSH.Bfl.db 4 mu11ksubbcdf 29 nugomm1a520177probe 29 org.MeSH.Spu.db 3 hgu133bprobe 37 htmg430bcdf 27 pd.mirna.2.0 29 hgu133plus2frmavecs 46 pd.ragene.2.0.st 29 pd.equgene.1.1.st 42 pd.mg.u74a 29 gahgu95ccdf 11 org.MeSH.Tgo.ME49.db 3 pd.mapping250k.sty 198 Mu15v1.db 38 test1cdf 28 mi16cod.db 32 org.MeSH.Eco.O26.H11.11368.db 3 TxDb.Rnorvegicus.UCSC.rn5.refGene 156 xtropicaliscdf 28 TxDb.Mmusculus.UCSC.mm10.ensGene 124 rat2302probe 34 mogene10stv1probe 32 FDb.UCSC.tRNAs 149 org.MeSH.Dmo.db 3 rattoxfxcdf 27 PolyPhen.Hsapiens.dbSNP131 136 org.MeSH.Eco.HS.db 4 ag.db 40 test3cdf 34 hugene10sttranscriptcluster.db 573 illuminaHumanv2BeadID.db 34 saureuscdf 30 SNPlocs.Hsapiens.dbSNP.20120608 29 hgu95d.db 41 org.Pf.plasmo.db 96 pd.cotton 29 reactome.db 3538 mgu74c.db 36 rgu34ccdf 28 org.Pt.eg.db 357 gahgu95dcdf 13 mgu74av2probe 31 Norway981.db 35 SNPlocs.Hsapiens.dbSNP.20090506 18 celegans.db 61 ygs98probe 31 humanomni25quadv1bCrlmm 20 hgu95eprobe 31 hivprtplus2cdf 29 pd.hg.u95a 115 BSgenome.Cfamiliaris.UCSC.canFam3.masked 26 pd.mogene.1.0.st.v1 80 rat2302cdf 50 BSgenome.Celegans.UCSC.ce6 40 rwgcod.db 32 BSgenome.Mmulatta.UCSC.rheMac2 41 BSgenome.Btaurus.UCSC.bosTau4 53 org.MeSH.Osa.db 4 BSgenome.Amellifera.UCSC.apiMel2.masked 24 ecoliasv2cdf 30 pd.cangene.1.1.st 32 pd.feinberg.hg18.me.hx1 35 pd.cyngene.1.1.st 34 mgu74aprobe 30 org.MeSH.Eco.K12.DH10B.db 4 hguDKFZ31.db 37 pd.genomewidesnp.5 200 BSgenome.Tguttata.UCSC.taeGut1.masked 22 pd.rhegene.1.0.st 59 BSgenome.Amellifera.BeeBase.assembly4 35 rgug4130a.db 38 rat2302.db 73 mgug4120a.db 35 human610quadv1bCrlmm 59 BSgenome.Amellifera.UCSC.apiMel2 44 primeviewcdf 65 fly.db0 56 org.MeSH.Aca.db 4 gahgu95e.db 14 htratfocuscdf 30 mm24kresogen.db 27 pig.db0 47 pd.x.laevis.2 32 mu19ksubb.db 36 BSgenome.Ecoli.NCBI.20080805 216 celegansprobe 34 ragene10sttranscriptcluster.db 41 pd.cyrgene.1.0.st 35 hu6800cdf 33 BSgenome.Btaurus.UCSC.bosTau3.masked 27 moex10stprobeset.db 33 hapmap370k 38 BSgenome.Ggallus.UCSC.galGal4.masked 23 humanomniexpress12v1bCrlmm 29 ragene11sttranscriptcluster.db 41 BSgenome.Rnorvegicus.UCSC.rn5 142 pd.2006.10.31.rn34.refseq.promoter 29 humanomni258v1p1bCrlmm 1 rgu34acdf 32 pd.nugo.hs1a520180 26 PartheenMetaData.db 39 raex10sttranscriptcluster.db 34 MmAgilentDesign026655.db 39 agcdf 31 malaria.db0 45 pd.081229.hg18.promoter.medip.hx1 29 hu35ksubdcdf 30 mgug4122a.db 38 SHDZ.db 36 BSgenome.Btaurus.UCSC.bosTau6.masked 70 BSgenome.Mmulatta.UCSC.rheMac3 40 illuminaHumanv3.db 288 org.MeSH.Sau.USA300TCH1516.db 3 ricecdf 38 pd.moe430b 28 HuExExonProbesetLocationHg18 27 org.MeSH.Ame.db 4 human370v1cCrlmm 186 pd.rat230.2 50 gahgu95dprobe 16 hgu95ccdf 33 org.MeSH.Pab.db 4 pd.ath1.121501 32 medicagoprobe 32 BSgenome.Alyrata.JGI.v1 33 org.MeSH.Eco.O26.H7.CB9615.db 4 xenopuslaevisprobe 32 m10kcod.db 33 hugene20stprobeset.db 39 hgug4100a.db 38 org.MeSH.Pae.PA7.db 3 yeast2cdf 34 mouse430a2.db 71 mgu74bprobe 33 pd.ag 33 rgu34cprobe 31 org.MeSH.Eco.UTI89.db 3 pd.rae230a 30 hcg110probe 29 org.MeSH.Tgu.db 4 GGHumanMethCancerPanelv1.db 30 zebrafish.db 39 Hspec 21 TxDb.Rnorvegicus.BioMart.igis 25 pd.margene.1.0.st 27 pd.rabgene.1.0.st 28 pd.chigene.1.0.st 23 pd.medgene.1.0.st 29 pd.medgene.1.1.st 23 pd.fingene.1.1.st 23 agahomology 2 hgu133a 2 adme16cod 2 illuminaMousev1BeadID.db 4 illuminaHumanDASLBeadID.db 4 illuminaHumanv3BeadID.db 4 illuminaHumanv1BeadID.db 9 GO 2 hgfocus 2 hsex10stv2hsrefseq 1 hsex10stv2hsrefseqprobe 1 hs133pptense7probe 1 hs133phsrefseq7probe 1 hs133phsentrezg7cdf 1 mogene10st.db 1 h20kcod 2 hspeccdf 22 athhomology 2 YEAST 2 ag 2 gahgu95e 1 hugene10stv1.r3cdf 1 mm74av1mmentrezgcdf 1 mouse430a2 2 org.Hs.sp.db 2 dmdrosophila2dmenst7cdf 1 hs133xhsensg7probe 1 dmdrosophila2dmense7probe 1 hs133bhsentrezg7probe 1 illuminaHumanv2 2 BSgenome.Dmelanogaster.UCSC.dm6 215 BSgenome.Rnorvegicus.UCSC.rn6 134 ath1atrefseq 1 hs133ahsentrezg 2 hs133ahsentrezgcdf 2 hs133phsentrezg 1 cfcanine2cfenst7cdf 1 lumiHumanIDMapping.db 1 org.Rn.sp.db 3 rwgcod 2 hs133aptentrezgprobe 1 dmgenome1dmenst7probe 1 dmgenome1dmensg7cdf 1 lumiMouseV1 1 org.MeSH.Mes.db 4 mogene10stv1cdf 55 ecoli2probe 29 org.MeSH.Sau.MSHR1132.db 4 lumiRatAll.db 35 org.MeSH.Sau.Mu3.db 3 gahgu95c.db 14 org.MeSH.Eco.IAI1.db 3 pd.huex.1.0.st.v2 121 pd.moe430a 34 org.MeSH.Eco.O103.H2.12009.db 3 org.MeSH.Eco.BW2952.db 4 mirbase.db 234 human1mduov3bCrlmm 31 hguqiagenv3.db 37 BSgenome.Mmusculus.UCSC.mm8 136 org.MeSH.Sau.VC40.db 3 Mus.musculus 392 pd.ht.hg.u133a 34 GO.db 23279 ecoli2.db 39 illuminaHumanWGDASLv4.db 35 org.Hs.eg.db 19128 hgfocusprobe 59 mirna10cdf 43 mgu74cprobe 30 chicken.db0 53 pd.mg.u74av2 31 BSgenome.Hsapiens.NCBI.GRCh38 745 POCRCannotation.db 36 mu6500subbcdf 31 illuminaHumanv1.db 69 hgu133a.db 936 hgu95e.db 36 xlaevis2cdf 28 pd.rn.u34 27 caninecdf 31 org.MeSH.Gga.db 3 hu6800.db 278 BSgenome.Drerio.UCSC.danRer6.masked 23 saureusprobe 35 sugarcaneprobe 31 BSgenome.Btaurus.UCSC.bosTau4.masked 24 LAPOINTE.db 37 BSgenome.Ptroglodytes.UCSC.panTro3.masked 23 rgu34bprobe 31 lumiRatIDMapping 32 u133x3pcdf 35 rat.db0 55 hgu133bcdf 60 BSgenome.Cfamiliaris.UCSC.canFam3 57 mouse4302.db 216 rgu34aprobe 30 org.Dm.eg.db 1236 pd.yeast.2 30 pd.mg.u74cv2 30 org.Mmu.eg.db 542 pd.hg.u219 46 org.MeSH.Dre.db 4 arabidopsis.db0 54 htmg430pmcdf 34 hthgu133bcdf 31 pd.hg.u95c 29 u133x3p.db 47 gahgu95b.db 14 hugene10stv1cdf 119 moex10sttranscriptcluster.db 31 indac.db 36 pd.poplar 30 pd.hugene.2.0.st 92 hgu95a.db 736 mouse430a2probe 32 pd.cyrgene.1.1.st 29 org.MeSH.Xla.db 3 gahgu133acdf 14 ragene11stprobeset.db 37 illuminaRatv1.db 36 lumiHumanIDMapping 99 BSgenome.Sscrofa.UCSC.susScr3.masked 26 BSgenome.Hsapiens.UCSC.hg19.masked 159 primeviewprobe 31 sugarcanecdf 28 org.MeSH.Sil.db 3 BSgenome.Hsapiens.UCSC.hg18.masked 61 pd.felgene.1.0.st 29 chickencdf 31 rae230b.db 38 hgu95dcdf 30 Homo.sapiens 1119 org.MeSH.Spo.972h.db 3 org.MeSH.Eco.B.REL606.db 4 pd.ragene.2.1.st 31 human550v3bCrlmm 23 wheatprobe 29 org.MeSH.Dme.db 3 BSgenome.Celegans.UCSC.ce10 71 ecoliSakai.db0 46 pd.canine 30 org.MeSH.Oan.db 4 mu6500subccdf 28 BSgenome.Cfamiliaris.UCSC.canFam2.masked 24 hs25kresogen.db 33 BSgenome.Dmelanogaster.UCSC.dm3.masked 26 rae230bprobe 34 hgu95aprobe 35 TxDb.Dmelanogaster.UCSC.dm3.ensGene 565 hgu133plus2.db 1882 pd.mu11ksuba 30 org.MeSH.Eco.CFT073.db 3 pd.citrus 34 u133x3pprobe 30 org.MeSH.Ath.db 3 org.MeSH.Xtr.db 3 cyp450cdf 27 org.MeSH.Sau.Newman.db 4 ye6100subacdf 29 hu35ksubdprobe 32 mgu74cv2probe 31 hu35ksubcprobe 32 BSgenome.Ggallus.UCSC.galGal3 111 pd.x.tropicalis 31 humanCHRLOC 65 chicken.db 39 org.MeSH.Cpo.db 4 lumiHumanAll.db 106 gahgu133b.db 17 BSgenome.Ptroglodytes.UCSC.panTro3 38 BSgenome.Hsapiens.UCSC.hg17.masked 34 pd.feinberg.mm8.me.hx1 32 nugomm1a520177.db 32 pd.hugene.2.1.st 128 mu19ksubc.db 35 TxDb.Athaliana.BioMart.plantsmart19 5 moe430b.db 37 org.Ss.eg.db 525 mgu74cv2cdf 28 ath1121501.db 70 org.Hs.ipi.db 20 IlluminaHumanMethylation450kprobe 34 nugohs1a520180.db 31 org.EcSakai.eg.db 261 pd.rae230b 28 hgu95ecdf 30 cottonprobe 33 rgu34bcdf 30 IlluminaHumanMethylation450k.db 25 pd.maize 30 org.MeSH.Cre.db 3 rnu34cdf 30 org.MeSH.Dse.db 3 org.At.tair.db 808 hgu95av2 93 BSgenome.Drerio.UCSC.danRer5.masked 23 rguatlas4k.db 34 zebrafish.db0 44 org.MeSH.Mdo.db 4 TxDb.Athaliana.BioMart.plantsmart12 6 pd.hg.u95d 30 BSgenome.Ggallus.UCSC.galGal4 41 canine.db0 49 human660quadv1aCrlmm 24 gahgu95ecdf 11 org.MeSH.Nle.db 4 illuminaMousev1.db 36 maizeprobe 31 pd.mogene.1.1.st.v1 43 pd.s.aureus 30 zebrafishprobe 33 org.MeSH.Dpe.db 4 pd.bovine 36 org.MeSH.Sau.Mu50.db 3 pd.mu11ksubb 30 org.MeSH.Eco.O127.H6.E2348.69.db 3 hu35ksubacdf 28 hgug4110b.db 41 mogene11stprobeset.db 39 rgug4105a.db 36 gahgu95d.db 14 Hs6UG171.db 35 cottoncdf 31 org.MeSH.Eco.O111.H.11128.db 4 pd.raex.1.0.st.v1 38 hgug4101a.db 35 genomewidesnp6Crlmm 214 pd.mirna.3.0 28 rtu34.db 35 illuminaHumanWGDASLv3.db 30 hthgu133aprobe 33 BSgenome.Athaliana.TAIR.04232008 37 htmg430bprobe 30 org.MeSH.Ssc.db 4 org.MeSH.Bsu.W23.db 3 mu6500subdcdf 28 vitisviniferaprobe 32 org.MeSH.Eco.ED1a.db 4 org.MeSH.Aml.db 4 humanomni1quadv1bCrlmm 28 org.MeSH.Sco.A32.db 4 pd.porcine 31 paeg1aprobe 29 ri16cod.db 37 SNPlocs.Hsapiens.dbSNP.20110815 15 hu35ksuba.db 36 org.MeSH.Sce.S288c.db 4 hugene21sttranscriptcluster.db 41 test2cdf 29 pd.mirna.1.0 29 ragene21sttranscriptcluster.db 32 org.MeSH.Pae.LESB58.db 4 barley1probe 32 org.MeSH.Sau.MSSA476.db 4 org.MeSH.Eco.IAI39.db 4 org.MeSH.Eco.S88.db 3 org.MeSH.Mga.db 3 mgu74b.db 40 xenopuslaeviscdf 31 hgu133a2cdf 104 mwgcod.db 36 moe430aprobe 33 targetscan.Mm.eg.db 33 org.MeSH.Eco.KO11FL.db 3 org.MeSH.Pto.db 4 miRNAtap.db 108 TxDb.Hsapiens.BioMart.igis 25 TxDb.Athaliana.BioMart.plantsmart22 152 pd.drogene.1.1.st 23 pd.mirna.4.0 35 pd.margene.1.1.st 23 pd.fingene.1.0.st 31 celegans 2 IlluminaHumanMethylation450kannotation.ilmn.v1.2 4 mgug4122a 2 hgu133plus2 2 ath1121501 2 lumiHumanV2 1 Masks.Dmelanogaster.UCSC.dm3 6 BSgenome.Athaliana.TAIR.01222004 8 illuminaMousev1 1 atgenomeattigr7probe 1 hs133bptensg7probe 1 hgu95a 2 atgenomeattigr7cdf 1 hs133bhsense7cdf 1 dmgenome1dmrefseq7probe 1 hgu95e 2 TxDb.Mmusculus.BioMart.igis 0 hs95av2hsense 2 humanLLMappings 2 KEGGprofile 0 gahgu133b 1 gahgu95b 1 gahgu95c 1 KEGG 2 hvuhomology 2 BSgenome.Dmelanogaster.FlyBase.r51 1 hs133ahsensgcdf 2 TxDb.Scerevisiae.UCSC.sacCer2.ensGene 1 cfcanine2cfensg7cdf 1 hgu133a2 2 illuminaHumanv3ProbeID.db 1 rat2302 3 hs133aptense7probe 1 pd.chicken 29 illuminaMousev2.db 55 org.MeSH.Cal.SC5314.db 4 hguatlas13k.db 37 org.MeSH.Laf.db 3 r10kcod.db 36 genomewidesnp5Crlmm 197 org.MeSH.Sau.MRSA252.db 4 mpedbarray.db 39 ye6100subdcdf 31 org.MeSH.Sau.M013.db 3 hu35ksubc.db 37 hgug4845a.db 29 rtu34cdf 30 BSgenome.Scerevisiae.UCSC.sacCer3 174 pd.ragene.1.0.st.v1 39 mirna102xgaincdf 27 pd.mirna.3.1 28 org.MeSH.Ana.db 4 FDb.InfiniumMethylation.hg19 1531 IlluminaHumanMethylation450kmanifest 1324 rhesusprobe 32 anopheles.db0 45 OperonHumanV3.db 36 org.MeSH.Cja.db 4 pd.porgene.1.0.st 32 pd.bovgene.1.1.st 105 TxDb.Mmusculus.UCSC.mm9.knownGene 624 TxDb.Hsapiens.UCSC.hg18.knownGene 580 pd.hg.u133a 73 org.MeSH.Pfa.3D7.db 3 targetscan.Hs.eg.db 159 BSgenome.Ggallus.UCSC.galGal3.masked 23 pd.vitis.vinifera 30 mgug4104a.db 33 mgu74cv2.db 41 drosgenome1cdf 31 hgu133plus2cdf 691 ecolicdf 62 illuminaHumanv2.db 72 BSgenome.Drerio.UCSC.danRer7 332 vitisviniferacdf 31 org.MeSH.Sau.USA300FPR3757.db 4 pd.tomato 30 porcine.db 37 pd.medicago 27 pd.ovigene.1.0.st 30 BSgenome.Scerevisiae.UCSC.sacCer2 201 pd.zebgene.1.0.st 28 BSgenome.Osativa.MSU.MSU7 54 pd.rcngene.1.1.st 30 gahgu95bcdf 12 pd.hugene.1.0.st.v1 234 hugene11stprobeset.db 51 org.Sc.sgd.db 606 hcg110cdf 29 BSgenome.Rnorvegicus.UCSC.rn5.masked 38 HuExExonProbesetLocationHg19 29 pd.mapping50k.xba240 233 BSgenome.Tgondii.ToxoDB.7.0 36 canine2cdf 32 hom.Sc.inp.db 22 chickenprobe 33 BSgenome.Mmusculus.UCSC.mm9 357 huex10stprobeset.db 31 hgu95bcdf 32 mgu74bcdf 29 pd.cangene.1.0.st 37 bovine.db0 51 BSgenome.Hsapiens.UCSC.hg17 56 FDb.FANTOM4.promoters.hg19 28 hgu219cdf 61 pd.canine.2 30 pd.zebgene.1.1.st 37 mu11ksuba.db 35 mgu74a.db 38 BSgenome.Athaliana.TAIR.TAIR9 74 hu35ksubccdf 29 org.MeSH.Sau.N315.db 4 yeast2probe 35 hom.Ce.inp.db 19 pd.hg.u95e 33 hu6800probe 32 Mu22v3.db 36 hgu95c.db 39 barley1cdf 32 hgu133atagprobe 50 org.MeSH.Cel.db 4 h10kcod.db 35 agprobe 31 rhesus.db0 52 BSgenome.Gaculeatus.UCSC.gasAcu1.masked 22 rtu34probe 30 pd.mapping50k.hind240 209 hugene10stv1probe 41 org.MeSH.Dvi.db 4 porcinecdf 32 hgu133a2.db 274 SNPlocs.Hsapiens.dbSNP.20101109 28 pd.porgene.1.1.st 31 BSgenome.Dmelanogaster.UCSC.dm2.masked 23 hgu95bprobe 31 pd.hugene.1.1.st.v1 85 celeganscdf 33 TxDb.Rnorvegicus.UCSC.rn4.ensGene 296 maizecdf 30 poplarcdf 31 org.Sco.eg.db 16 BSgenome.Mmulatta.UCSC.rheMac2.masked 25 hgu95b.db 38 org.Rn.eg.db 1764 gahgu133bcdf 10 pd.bsubtilis 34 gahgu95av2.db 14 pd.hg.u133a.tag 31 hgu219probe 31 org.MeSH.Eco.UMN026.db 4 TxDb.Celegans.UCSC.ce6.ensGene 290 mirna10probe 30 mogene20sttranscriptcluster.db 44 hcg110.db 39 moe430a.db 50 rgu34a.db 45 pd.mogene.2.1.st 42 hom.At.inp.db 18 pd.ecoli 30 mogene10sttranscriptcluster.db 93 org.MeSH.Dgr.db 4 ye6100subccdf 29 rae230bcdf 31 Rattus.norvegicus 67 hgu133afrmavecs 58 IlluminaHumanMethylation27k.db 44 xlaevis.db 37 BSgenome.Mmusculus.UCSC.mm9.masked 48 BSgenome.Mmusculus.UCSC.mm8.masked 124 rgu34c.db 37 drosgenome1.db 55 pedbarrayv10.db 38 org.MeSH.Eco.O157.H7.Sakai.db 3 pd.u133.x3p 41 nugohs1a520180probe 29 ath1121501cdf 63 pd.mg.u74bv2 29 xtropicalisprobe 31 ragene20stprobeset.db 34 hom.Hs.inp.db 33 hthgu133afrmavecs 21 mouse430a2cdf 40 BSgenome.Rnorvegicus.UCSC.rn4.masked 32 rae230a.db 85 moe430acdf 33 mouse4302frmavecs 74 bovineprobe 37 hgu95cprobe 33 mgu74av2.db 47 org.Xl.eg.db 368 hthgu133a.db 96 hthgu133acdf 40 RmiR.Hs.miRNA 37 org.MeSH.Pae.PAO1.db 3 RmiR.hsa 36 SIFT.Hsapiens.dbSNP132 80 SNPlocs.Hsapiens.dbSNP.20111119 22 TxDb.Scerevisiae.UCSC.sacCer3.sgdGene 88 xlaevis2probe 27 mu19ksubbcdf 27 pd.hg.u133a.2 46 ragene10stprobeset.db 39 rae230acdf 33 BSgenome.Btaurus.UCSC.bosTau3 59 BSgenome.Mmusculus.UCSC.mm10.masked 69 HuO22.db 35 human.db0 104 BSgenome.Drerio.UCSC.danRer7.masked 24 org.MeSH.Sau.RF122.db 3 pd.moex.1.0.st.v1 51 MeSH.db 18 u133aaofav2cdf 34 org.MeSH.Dsi.db 3 paeg1acdf 30 mogene10stprobeset.db 44 org.MeSH.Ocu.db 4 org.MeSH.Tbr.9274.db 4 mouseCHRLOC 24 drosophila2cdf 34 org.MeSH.Eco.K12.MG1655.db 3 lumiMouseAll.db 37 org.MeSH.Ddi.AX4.db 3 pd.aragene.1.1.st 39 gahgu133aprobe 15 gahgu95eprobe 15 human650v3aCrlmm 29 org.MeSH.Eco.SE11.db 3 plasmodiumanophelescdf 48 pd.2006.07.18.hg18.refseq.promoter 33 pd.nugo.mm1a520177 23 human1mv1cCrlmm 29 org.MeSH.Lma.db 3 mgu74av2cdf 35 ye6100subbcdf 28 mu19ksubacdf 29 RnAgilentDesign028282.db 40 mgu74bv2.db 36 org.MeSH.Sau.ED98.db 4 mgu74bv2probe 28 htmg430aprobe 37 org.MeSH.Eco.O157.H7.TW14359.db 3 pd.bovgene.1.0.st 34 org.MeSH.Bsu.RONN1.db 4 bsubtiliscdf 28 MafDb.ALL.wgs.phase1.release.v3.20101123 9 mgu74ccdf 29 org.MeSH.Hsa.db 4 org.MeSH.Eco.APEC01.db 3 TxDb.Hsapiens.UCSC.hg19.lincRNAsTranscripts 153 gahgu133bprobe 15 pd.e.coli.2 34 drosgenome1probe 31 BSgenome.Gaculeatus.UCSC.gasAcu1 43 medicagocdf 30 pd.hg.u95av2 65 org.MeSH.Aga.PEST.db 3 BSgenome.Mfuro.UCSC.musFur1 26 SNPlocs.Hsapiens.dbSNP141.GRCh38 13 pd.chogene.2.0.st 27 pd.drogene.1.0.st 30 mta10sttranscriptcluster.db 5 pd.rcngene.1.0.st 22 pd.chogene.2.1.st 22 pd.rjpgene.1.0.st 29 pd.hta.2.0 92 pd.soygene.1.0.st 26 pd.rusgene.1.0.st 22 pd.rabgene.1.1.st 25 pd.guigene.1.1.st 34 hs133phsentrezgcdf 1 hugene10st.db 1 SNPlocs.Hsapiens.dbSNP.20071016 4 hwgcod 2 illuminaHumanv1 1 hsfocushsentrezgcdf 1 hs133pptensg7cdf 1 hs133phsug7probe 1 hs133bhsense7probe 1 hs133pptense7cdf 1 hs133bptense7probe 1 mouse4302 2 lumiRatV1 1 gahgu95av2 1 gahgu133plus2 2 gahgu133a 2 dmdrosophila2dmensg7probe 1 illuminaMousev1p1 1 hs133phsenst7probe 1 hs95av2ptensg7probe 1 hs133xptensg7cdf 1 u133x3p 2 hsex10stv2ptensg7cdf 1 hs133xhsense7probe 1 rae230a 2 mm430mmense 2 mgu74av2 2 dmdrosophila2dmrefseq 1 lumiHumanV1 1 hs95av2ptensg7cdf 1 MafDb.ESP6500SI.V2.SSA137 6 MafDb.ExAC.r0.3.sites 5 MeSH.Aca.eg.db 12 MeSH.Dan.eg.db 10 MeSH.Eco.ED1a.eg.db 9 MeSH.Eco.K12.DH10B.eg.db 5 MeSH.Ocu.eg.db 11 MeSH.Syn.eg.db 13 MeSH.Tbr.9274.eg.db 11 MeSH.Dre.eg.db 10 MeSH.Eqc.eg.db 9 SNPlocs.Hsapiens.dbSNP142.GRCh37 13 MeSH.Dmo.eg.db 10 MeSH.Sil.eg.db 9 MeSH.Eco.UMN026.eg.db 10 MeSH.Eco.IAI39.eg.db 10 MeSH.Tgu.eg.db 10 MeSH.Pfa.3D7.eg.db 9 MeSH.Pae.PAO1.eg.db 11 MeSH.Pto.eg.db 10 MeSH.Spo.972h.eg.db 6 MeSH.Dda.3937.eg.db 10 MeSH.Dse.eg.db 10 EnsDb.Rnorvegicus.v79 104 MeSH.Ath.eg.db 11 pd.rta.1.0 47 MeSH.Cbr.eg.db 11 MeSH.Xla.eg.db 11 MeSH.Mml.eg.db 12 MeSH.Dsi.eg.db 11 MeSH.Dvi.eg.db 11 MeSH.Laf.eg.db 10 MeSH.Eco.IAI1.eg.db 5 BSgenome.Mfascicularis.NCBI.5.0 46 SNPlocs.Hsapiens.dbSNP144.GRCh38 514 int.mppi.db 1 sc.dbsubloc.db 3 dName.db 3 scop.db 1 org.Hs.ref.db 4 MafDb.ALL.wgs.phase3.release.v5b.20130502 5 phastCons100way.UCSC.hg38 135 hi16cod 2 hgug4100a 2 mm74av2mmensecdf 2 xtrhomology 1 ScerevisiaeGenome.sacCer1 1 rnex10stv1rnug7cdf 1 rnex10stv1rnense7probe 1 rn34arnenst7probe 1 rn230rnense7cdf 1 rn230brnug7probe 1 rn230brnenst7cdf 1 rn34arnensg7probe 1 rn230rnrefseq7probe 1 rn230arnrefseq7cdf 1 rn230brnrefseq7probe 1 rn230rnentrezg7cdf 1 rn230rnenst7cdf 1 rguatlas4k 2 rgu34c 3 r10kcod 3 rae230b 2 mm430mmrefseqcdf 2 mm430ammugcdf 2 hs133phsrefseq 1 drzebrafishdrenstprobe 1 mi16cod 2 hsfocushsense 2 rn230rnensecdf 1 hs133pptenseprobe 2 mm11ksubammense7probe 1 mm11ksubammensg7cdf 1 mm11ksubbmmensg7cdf 1 mm11ksubbmmenst7probe 1 mm11ksubbmmentrezg7probe 1 mm11ksubbmmrefseq7probe 1 mm430ammenst7cdf 1 mm430ammrefseq7cdf 1 mm430bmmensg7probe 1 mm430bmmentrezg7cdf 1 mm430mmensg7cdf 1 mm430mmentrezg7cdf 1 mm74av1mmenst7probe 1 mm74av1mmrefseq7probe 1 mm74av1mmug7cdf 1 mm74av2mmenst7cdf 1 mm74av2mmense7cdf 1 mmex10stv1mmense7cdf 1 mmex10stv1mmrefseq7cdf 1 mmex10stv1mmrefseq7probe 1 mmuhomology 2 atgenomeattigr 1 atgenomeattigrprobe 1 ath1attigr 1 ath1attigrcdf 1 BSgenome.Dmelanogaster.BDGP.Release5 1 ggchickenggensg7cdf 1 ggchickenggenst7probe 1 egohomology 2 drzebrafishdrug7cdf 1 hgu95b 2 mouseLLMappings 2 mwgcod 3 PFAM 2 hs133xhsenstprobe 2 hs133xhsentrezgprobe 1 hs133xptensgprobe 1 hs95av2hsensg 2 hs95av2hsenstcdf 1 hs95av2hsentrezg 1 hs95av2hsrefseqcdf 2 hs95av2hsug 2 hs95av2ptensg 1 hs95av2ptensgcdf 2 hs95av2ptensgprobe 2 hs95av2ptenst 1 hs95av2ptenstcdf 1 hs95av2ptenstprobe 2 hsex10stv2hsensecdf 1 hsex10stv2hsensg 1 hsex10stv2hsensgcdf 1 hsex10stv2hsentrezg 1 hsex10stv2hsentrezgcdf 1 hsex10stv2hsugcdf 1 BSgenome.Mmusculus.UCSC.mm7 2 btbovinebtensg 1 btbovinebtenst 1 btbovinebtenstprobe 1 btbovinebtrefseqcdf 1 btbovinebtrefseqprobe 1 cfahomology 2 cfcanine2cfense 1 cfcanine2cfensg 1 cfcanine2cfenstprobe 1 cfcanine2cfentrezg 1 cfcanine2cfentrezgprobe 1 cfcanine2cfrefseqcdf 1 cfcanine2cfugcdf 1 cfcanine2cfugprobe 1 dmdrosophila2dmense 1 dmdrosophila2dmrefseqcdf 1 dmdrosophila2dmrefseqprobe 1 dmgenome1dmense 1 dmgenome1dmensg 1 dmgenome1dmenst 2 dmgenome1dmugcdf 1 drzebrafishdrensgprobe 1 drzebrafishdrentrezgprobe 1 drzebrafishdrugcdf 1 drzebrafishdrugprobe 1 ggchickenggensgcdf 1 ggchickenggensgprobe 1 ggchickenggenstcdf 1 ggchickenggentrezg 1 ggchickenggentrezgprobe 1 ggchickenggug 2 hgu95c 2 hgu95d 2 hguDKFZ31 2 hguqiagenv3 3 hs133ahsenstcdf 1 hs133ahsrefseqcdf 2 hs133ahsugprobe 2 hs133ahsvegaeprobe 1 hs133aptensgcdf 2 hs133aptentrezg 1 hs133av2hsense 1 hs133av2hsenstprobe 1 hs133av2hsenseprobe 2 hs133av2hsentrezgcdf 1 hs133av2hsug 2 hs133av2hsugprobe 1 hs133av2hsvegaeprobe 1 HsapiensGenome.hg16 1 hsex10stv2hsense7cdf 1 hsex10stv2hsenst7cdf 1 hsex10stv2hsrefseq7cdf 1 hsex10stv2hsug7cdf 1 hsfocushsense7probe 1 hsfocushsensg7probe 1 hsfocushsrefseq7cdf 1 hsfocushsrefseq7probe 1 hsfocushsug7probe 1 hsfocusptense7probe 1 indac 3 mm11ksubammentrezg 1 mm11ksubammentrezgprobe 1 mm11ksubammrefseq 1 mm11ksubammrefseqprobe 1 mm11ksubammug 1 mm11ksubbmmentrezgprobe 1 rn230arnrefseq 1 rn230brnenstcdf 1 rn230brnentrezg 1 rn230brnentrezgprobe 1 rn230brnrefseq 2 rn230rnentrezg 2 rn230rnentrezgprobe 1 rn230rnugcdf 1 rn230rnugprobe 1 rn34arnenseprobe 1 rn34arnentrezgprobe 2 rn34arnrefseq 1 rnex10stv1rnenstcdf 1 rnex10stv1rnenstprobe 1 rnex10stv1rnentrezgprobe 1 cfcanine2cfenst7probe 1 dmdrosophila2dmug7probe 1 dmgenome1dmense7cdf 1 dmgenome1dmug7cdf 1 drzebrafishdrense7probe 1 drzebrafishdrenst7cdf 1 hs133ahsenst7cdf 1 hs133ahsrefseq7probe 1 hs133ahsug7probe 1 hs133av2hsense7probe 1 hs133av2hsensg7probe 1 hs133av2hsenst7cdf 1 hs133av2hsentrezg7probe 1 hs133av2ptense7cdf 1 hs133av2ptensg7probe 1 hs133phsenst7cdf 1 hs133phsentrezg7probe 1 hs133pptensg7probe 1 hs133xhsense7cdf 1 hs133xhsenst7probe 1 hs133xhsentrezg7probe 1 hs133xhsug7probe 1 hs133xptensg7probe 1 hs95av2hsug7probe 1 hs95av2ptense7cdf 1 hs133av2ptenst 1 hs133bhsense 2 hs133bhsenseprobe 1 hs133bhsugprobe 1 hs133bptenseprobe 1 hs133bptentrezg 2 hs133phsense 1 hs133phsenseprobe 1 hs133phsrefseqprobe 1 hs133pptensecdf 2 hs133pptensg 1 hs133pptensgprobe 1 hs133xhsenseprobe 2 rnex10stv1rnug 1 Norway981 2 cfcanine2cfensg7probe 1 hs133av2ptrefseqcdf 1 mm74av2mmvegagprobe 1 hsfocushsvegatcdf 1 mm430mmenstprobe 2 mm74cv2mmvegat 1 mm74cv2mmenst 1 mamurhesusmamuenst 1 mm74cv2mmentrezg 1 mm74av2mmrefseqprobe 2 mm430a2mmenstprobe 1 hsfocusptrefseqprobe 1 mm74bv2mmrefseqprobe 1 mamurhesusmamuensgcdf 1 mm74bv2mmentrezgcdf 1 mm430a2mmvegaeprobe 1 mm430ammenst 2 mm430ammentrezg 1 mm74av1mmvegat 1 mm74bv2mmug 2 mm430mmvegagprobe 1 mm74bv2mmenseprobe 1 mm74bv2mmensgcdf 1 mm74cv2mmvegag 1 hsfocushsensecdf 1 mm430ammvegaeprobe 1 mm430a2mmug 1 mm74av1mmrefseq 2 mm74bv2mmugprobe 1 hs133xhsvegatprobe 1 mm74cv2mmvegagprobe 1 mm430ammentrezgcdf 1 mm430mmvegae 1 mm74bv2mmentrezgprobe 1 BSgenome.Drerio.UCSC.danRer10 146 mm430bmmensgprobe 2 mm430bmmug 2 hs133av2hsvegagcdf 1 mm74cv2mmensecdf 1 hs95av2ptrefseqprobe 1 mm74bv2mmensgprobe 2 mm430a2mmensg 1 mm430mmrefseqprobe 2 mm430mmugcdf 2 mm74av1mmense 2 mm74av1mmugprobe 2 mm74av2mmentrezg 2 mm74av2mmugcdf 2 mm74bv2mmensg 2 mm74bv2mmvegag 1 mm74cv2mmense 2 pedbarrayv10 2 SHDZ 2 hsex10stv2ptensgprobe 1 hsex10stv2ptentrezgprobe 1 hsfocushsugcdf 2 mm430ammensgprobe 1 mm430bmmenseprobe 2 mm430bmmenst 2 mm430mmensgcdf 2 mm430mmensecdf 1 mm430mmenseprobe 2 mm430mmensg 2 mm430mmentrezgcdf 3 mmex10stv1mmensecdf 1 hs95av2hsvegagprobe 1 hs133pptrefseqcdf 2 mm430a2mmugcdf 1 mm11ksubammvegag 1 hs133av2ptensg 2 CelegansGenome.ce2 1 hs133av2ptensgcdf 1 hs133phsvegatcdf 1 mmex10stv1mmrefseq 1 hs133xhsvegae 1 hs133xhsvegagcdf 1 hs133xhsvegat 1 hs95av2hsvegat 1 hs95av2hsvegatcdf 1 mamurhesusmamuensecdf 2 mamurhesusmamuensgprobe 1 mm11ksubammvegatcdf 1 mm430a2mmvegae 1 mm430ammvegaecdf 1 mm430bmmvegagprobe 1 vvgrapevvtigrcdf 1 osriceostigrcdf 1 MeSH.Pae.LESB58.eg.db 0 MeSH.Eco.APEC01.eg.db 0 MeSH.Eco.O26.H7.CB9615.eg.db 0 MeSH.Eco.E24377A.eg.db 0 MeSH.Sau.COL.eg.db 0 MeSH.Sau.USA300FPR3757.eg.db 0 MeSH.Bsu.Bsn5.eg.db 0 MeSH.Eco.KO11FL.eg.db 0 MeSH.Eco.O103.H2.12009.eg.db 0 EnsDb.Mmusculus.v79 737 MeSH.Aga.PEST.eg.db 11 MeSH.Aml.eg.db 10 MeSH.Bta.eg.db 10 MeSH.Gga.eg.db 9 MeSH.Sau.USA300TCH1516.eg.db 5 MeSH.Vvi.eg.db 11 grasp2db 63 EnsDb.Hsapiens.v75 877 MeSH.Cpo.eg.db 11 MeSH.Cin.eg.db 12 MeSH.Lma.eg.db 11 MeSH.Eco.55989.eg.db 10 MeSH.Bsu.168.eg.db 13 MeSH.Nle.eg.db 10 MeSH.Gma.eg.db 11 pd.mta.1.0 41 MeSH.Eco.O127.H6.E2348.69.eg.db 5 MeSH.Mga.eg.db 11 MeSH.Mes.eg.db 9 MeSH.Xtr.eg.db 12 MeSH.Ptr.eg.db 12 MeSH.Ana.eg.db 10 hta20sttranscriptcluster.db 5 hta20stprobeset.db 5 MeSH.Rno.eg.db 11 XtraSNPlocs.Hsapiens.dbSNP144.GRCh38 135 org.Mm.cross.db 1 org.Rn.ipi.db 1 org.HsMm.ortholog.db 2 org.Hs.cross.db 7 homolog.db 1 int.geneint.db 2 org.Hs.bf.db 4 org.Rn.ref.db 4 TxDb.Athaliana.BioMart.plantsmart28 59 rtu34 2 sschomology 2 scehomology 1 vvgrapevvtigr7probe 1 rnohomology 2 rnex10stv1rnentrezg7cdf 1 rnex10stv1rnenst7cdf 1 rnex10stv1rnense7cdf 1 rn34arnense7probe 1 rn230rnentrezg7probe 1 rn230rnensg7probe 1 rn230rnensg7cdf 1 rn230brnense7probe 1 rn230brnensg7probe 1 rn34arnenst7cdf 1 rn230brnenst7probe 1 rn230arnensg7cdf 1 rn230arnrefseq7probe 1 rn230arnense7cdf 1 rgu34b 3 ratLLMappings 2 ptrhomology 2 mm430a2mmrefseq 1 hu35ksubb 3 hs133av2hsvegat 1 btbovinebtenstcdf 1 hs133pptentrezgprobe 2 mm11ksubbmmenstcdf 1 rn34arnugprobe 1 mgug4104a 2 mm11ksubammensg7probe 1 mm11ksubammenst7probe 1 mm11ksubammrefseq7probe 1 mm11ksubammug7cdf 1 mm11ksubbmmentrezg7cdf 1 mm11ksubbmmrefseq7cdf 1 mm430ammense7cdf 1 mm430ammentrezg7cdf 1 mm430ammrefseq7probe 1 mm430ammug7cdf 1 mm430ammug7probe 1 mm430bmmenst7probe 1 mm430bmmrefseq7cdf 1 mm430bmmug7cdf 1 mm430mmense7cdf 1 mm430mmentrezg7probe 1 mm74av1mmense7cdf 1 mm74av1mmensg7cdf 1 mm74av2mmensg7cdf 1 mm74av2mmensg7probe 1 mm74av1mmug7probe 1 mm74av2mmense7probe 1 mm74av2mmrefseq7cdf 1 mmex10stv1mmenst7cdf 1 mmex10stv1mmentrezg7cdf 1 atgenomeattair 1 atgenomeattaircdf 1 ath1atrefseqcdf 1 ath1atrefseqprobe 1 ggchickenggense7cdf 1 ggchickenggensg7probe 1 mu19ksubb 2 osriceosrefseq7probe 1 osriceostigr7probe 1 hs133xhsrefseqcdf 1 hs133xptense 1 hs133xptensecdf 2 hs133xptentrezgprobe 2 hs95av2hsensecdf 1 hs95av2hsensgcdf 2 hs95av2hsensgprobe 2 hs95av2ptentrezg 1 hs95av2ptentrezgcdf 2 hs95av2hsrefseqprobe 1 hs95av2ptense 1 hsex10stv2hsense 1 hsex10stv2hsenstprobe 2 btbovinebtense 1 btbovinebtentrezg 1 btbovinebtentrezgprobe 1 canine2 2 cfcanine2cfrefseq 1 cfcanine2cfrefseqprobe 1 cfcanine2cfvegatprobe 1 cinhomology 2 dmdrosophila2dmenst 1 dmdrosophila2dmugprobe 1 dmgenome1dmenseprobe 1 dmgenome1dmensgprobe 1 dmgenome1dmrefseqprobe 1 drehomology 2 drzebrafishdrensgcdf 1 drzebrafishdrentrezg 2 drzebrafishdrrefseqcdf 1 ggchickenggense 1 ggchickenggensecdf 1 ggchickenggenstprobe 1 ggchickenggugcdf 1 hs133ahsenseprobe 2 hs133ahsensgprobe 1 hs133ahsentrezgprobe 1 hs133ahsrefseqprobe 2 hs133ahsvegaecdf 1 hs133ahsvegagprobe 1 hs133ahsvegat 1 hs133aptensgprobe 2 hs133aptenstprobe 2 hs133aptrefseqcdf 1 hs133av2hsenst 1 hs133av2hsensg 1 hs133av2hsentrezgprobe 1 hsex10stv2hsensg7probe 1 hsex10stv2hsenst7probe 1 hsex10stv2hsentrezg7cdf 1 hsex10stv2hsentrezg7probe 1 hsex10stv2ptensg7probe 1 hsfocushsensg7cdf 1 hsfocushsentrezg7cdf 1 hsfocushsug7cdf 1 hsfocusptense7cdf 1 hu35ksubc 2 klahomology 2 m10kcod 2 mm11ksubammensgprobe 2 mm11ksubammenstcdf 1 mm11ksubammentrezgcdf 1 mm11ksubammrefseqcdf 1 mm11ksubammugprobe 2 mm11ksubbmmrefseqcdf 1 mm11ksubbmmug 1 rn230arnrefseqcdf 2 rn230arnrefseqprobe 1 rn230arnugprobe 2 rn230brnense 1 rn230brnenst 2 rn230brnenstprobe 1 rn230brnrefseqcdf 1 rn230rnensgprobe 1 rn230rnenst 1 rn34arnensecdf 1 rn34arnensgcdf 2 rn34arnenstprobe 1 rn34arnrefseqcdf 1 rn34arnugcdf 2 rnex10stv1rnensgcdf 1 rnex10stv1rnenst 1 dmdrosophila2dmense7cdf 1 dmdrosophila2dmenst7probe 1 cfcanine2cfentrezg7probe 1 cfcanine2cfrefseq7cdf 1 cfcanine2cfug7cdf 1 dmdrosophila2dmug7cdf 1 dmgenome1dmense7probe 1 dmgenome1dmrefseq7cdf 1 dmgenome1dmug7probe 1 drzebrafishdrense7cdf 1 drzebrafishdrensg7cdf 1 drzebrafishdrenst7probe 1 drzebrafishdrentrezg7cdf 1 drzebrafishdrentrezg7probe 1 drzebrafishdrrefseq7cdf 1 hs133ahsentrezg7cdf 1 hs133aptense7cdf 1 hs133av2hsense7cdf 1 hs133av2hsensg7cdf 1 hs133av2hsrefseq7cdf 1 hs133av2hsrefseq7probe 1 hs133av2hsug7cdf 1 hs133bhsenst7cdf 1 hs133phsense7cdf 1 hs133phsense7probe 1 hs133phsrefseq7cdf 1 hs133phsug7cdf 1 hs133xhsenst7cdf 1 hs95av2hsentrezg7cdf 1 hs95av2hsentrezg7probe 1 hs95av2hsrefseq7probe 1 hs133xhsug7cdf 1 hs133xptense7probe 1 hs95av2hsensg7cdf 1 hs95av2hsenst7cdf 1 hs133av2ptentrezgcdf 1 hs133bhsensg 2 hs133bhsensgcdf 2 hs133bhsenst 2 hs133bhsentrezg 2 hs133bhsrefseq 2 hs133bhsrefseqcdf 2 hs133bhsrefseqprobe 2 hs133bhsug 1 hs133bhsugcdf 2 hs133bptenstprobe 2 hs133phsensgprobe 2 hs133phsenst 1 hs133phsenstprobe 1 hs133phsug 2 hs133phsugcdf 2 hs133pptense 2 hs133pptensgcdf 2 hs133pptenstprobe 1 hs133xhsense 2 HsapiensGenome.hg17 1 BSgenome.Vvinifera.URGI.IGGP12Xv0 23 BSgenome.Vvinifera.URGI.IGGP12Xv2 29 hs133bptrefseq 1 mm11ksubammvegagprobe 1 hs133av2ptrefseqprobe 1 mm74av2mmensgcdf 2 mm430bmmensecdf 2 mm74bv2mmenst 2 mm74av1mmentrezg 1 hsfocusptensecdf 1 mpedbarray 1 mm430bmmugcdf 1 BSgenome.Mmusculus.UCSC.mm6 1 mm430a2mmvegaecdf 1 mm74bv2mmrefseq 2 mm430a2mmrefseqprobe 1 mm11ksubammvegaeprobe 1 moe430a 2 mm11ksubbmmvegatcdf 1 mm430mmvegagcdf 1 mm74bv2mmense 1 mm74av1mmvegag 1 hsfocushsug 1 hsfocusptenseprobe 1 mm430a2mmensecdf 1 hs133xhsvegaeprobe 1 mm430ammvegae 1 mm430bmmvegaecdf 1 mm11ksubbmmvegagcdf 1 mm74cv2mmenseprobe 2 hsfocusptentrezg 1 hsfocushsvegat 1 osriceosrefseqprobe 1 mm74av2mmenstcdf 1 mm74bv2mmvegaecdf 1 hs133av2hsvegagprobe 1 mm74av1mmugcdf 2 mamurhesusmamuenseprobe 1 illuminaRatv1 1 hsfocusptense 1 mm430ammrefseqprobe 1 mm430bmmrefseqcdf 2 mm430ammrefseq 2 mm430a2mmvegatprobe 1 mm74av2mmug 2 mm74cv2mmugprobe 2 mm11ksubbmmvegaecdf 1 mm430mmvegatcdf 1 mm74av2mmugprobe 1 mm430mmvegat 1 mm74av1mmensgprobe 2 mm74av1mmenstprobe 2 mm74av1mmrefseqprobe 2 mm74av1mmug 2 mm74av2mmensgprobe 2 mm74av2mmentrezgcdf 2 mm74av2mmvegaecdf 1 mm74bv2mmenstcdf 2 mm74bv2mmvegagcdf 1 mm74cv2mmugcdf 1 mm74bv2mmvegatcdf 1 moe430b 2 OperonHumanV3 2 pedbarrayv9 2 ri16cod 2 Roberts2005Annotation 2 hsex10stv2ptense 1 hsex10stv2ptensecdf 1 hsex10stv2ptensg 1 hsex10stv2ptensgcdf 1 hsex10stv2ptenstcdf 1 hsex10stv2ptenstprobe 1 hsfocushsenst 2 hsfocushsentrezg 1 hsfocushsrefseqprobe 2 mm430ammenstprobe 1 mm430bmmensgcdf 1 mm430bmmenstcdf 2 mmex10stv1mmenst 1 MmusculusGenome.mm7 1 hsfocusptrefseq 1 hsfocushsvegatprobe 1 hs133av2ptense 1 hs133bptrefseqprobe 1 mm430a2mmugprobe 1 hs133av2ptrefseq 1 hs133xptrefseqprobe 1 atgenomeatrefseq7probe 1 hcgi8k 1 hs133phsvegae 1 rn230arnensecdf 1 rn230arnensg 2 mmex10stv1mmentrezgprobe 1 hs133pptrefseq 1 hs133xhsvegaecdf 1 hs133xhsvegag 1 hs133xptrefseq 1 hs95av2hsvegaecdf 1 hsfocushsvegaeprobe 1 hsfocushsvegagprobe 1 mamurhesusmamuugcdf 1 mamurhesusmamuugprobe 1 mm11ksubammvegae 1 mm11ksubammvegagcdf 1 mm430a2mmvegagcdf 1 vvgrapevvtigrprobe 1 osriceostigr 1 illuminaHumanv2ProbeID.db 1 illuminaRatv1ProbeID.db 1 MeSH.Eco.O157.H7.EC4115.eg.db 0 MeSH.Pae.PA7.eg.db 0 MeSH.Pae.PA14.eg.db 0 MeSH.Eco.BW2952.eg.db 0 MeSH.Eco.536.eg.db 0 MeSH.Sau.RF122.eg.db 0 MeSH.Sau.N315.eg.db 0 EnsDb.Mmusculus.v75 41 MeSH.Eco.O157.H7.Sakai.eg.db 12 MeSH.Hsa.eg.db 14 MeSH.Mtr.eg.db 9 MeSH.Pab.eg.db 11 MeSH.Sco.A32.eg.db 11 MeSH.Ssc.eg.db 10 MeSH.Cel.eg.db 12 MeSH.Zma.eg.db 10 MeSH.Eco.K12.MG1655.eg.db 10 MeSH.Spu.eg.db 10 MeSH.Ddi.AX4.eg.db 10 MeSH.Der.eg.db 11 MeSH.Cal.SC5314.eg.db 11 MeSH.Cja.eg.db 11 BSgenome.Hsapiens.UCSC.hg38.masked 196 MeSH.Dgr.eg.db 12 MeSH.Dpe.eg.db 13 MeSH.Osa.eg.db 11 XtraSNPlocs.Hsapiens.dbSNP144.GRCh37 101 int.intact.db 5 org.Hs.pep.db 1 int.did.db 1 org.Mm.sp.db 4 sc.bacello.db 1 sysptm.db 2 org.Hs.goa.db 5 BSgenome.Hsapiens.1000genomes.hs37d5 894 MeSH.Atu.K84.eg.db 1 celhomology 2 zmahomology 2 taehomology 2 vvihomology 2 zebrafish 3 ygs98 3 xenopuslaevis 2 rnu34 2 rnex10stv1rnentrezg7probe 1 rnex10stv1rnensg7probe 1 rnex10stv1rnenst7probe 1 rn34arnug7probe 1 rn34arnrefseq7probe 1 rn230rnug7cdf 1 rn230rnrefseq7cdf 1 rn34arnense7cdf 1 rn230rnug7probe 1 rnex10stv1rnrefseq7probe 1 rn230brnense7cdf 1 rn230brnentrezg7probe 1 rn34arnug7cdf 1 rn34arnrefseq7cdf 1 rn230arnentrezg7cdf 1 rn230rnenst7probe 1 rn230brnentrezg7cdf 1 rn230arnenst7probe 1 rn230arnense7probe 1 rgug4130a 2 rgug4105a 2 rn230arnug7cdf 1 rgu34a 2 hu35ksuba 2 rn34arnensg 1 mm74av2mmrefseq 2 rn34arnentrezgcdf 1 hs133bptensgprobe 2 hs133ahsenst 2 mm11ksubammensecdf 1 mm430mmentrezgprobe 1 mm430ammvegagprobe 1 drzebrafishdrvegat 1 mgug4120a 2 mgug4121a 2 mm11ksubammense7cdf 1 mm11ksubammenst7cdf 1 mm11ksubammentrezg7cdf 1 mm11ksubbmmense7cdf 1 mm11ksubbmmense7probe 1 mm11ksubammrefseq7cdf 1 mm11ksubbmmensg7probe 1 mm11ksubbmmug7cdf 1 mm11ksubbmmug7probe 1 mm430ammense7probe 1 mm430ammenst7probe 1 mm430bmmense7cdf 1 mm430bmmense7probe 1 mm430bmmensg7cdf 1 mm430bmmenst7cdf 1 mm430bmmrefseq7probe 1 mm430mmenst7cdf 1 mm430mmrefseq7cdf 1 mm430mmrefseq7probe 1 mm430mmug7cdf 1 mm430mmug7probe 1 mm74av1mmense7probe 1 mm74av1mmenst7cdf 1 mm74av1mmentrezg7probe 1 mm74av2mmenst7probe 1 mm74av2mmug7cdf 1 mmex10stv1mmense7probe 1 mmex10stv1mmensg7cdf 1 mmex10stv1mmensg7probe 1 mmex10stv1mmentrezg7probe 1 mmex10stv1mmug7probe 1 atgenomeatrefseq 1 atgenomeatrefseqprobe 1 ath1attaircdf 1 ath1attairprobe 1 BSgenome.Hsapiens.UCSC.hg16 1 ggchickenggenst7cdf 1 ggchickenggrefseq7cdf 1 ggchickenggrefseq7probe 1 ggchickenggug7probe 1 ggahomology 2 ncrhomology 2 osriceosrefseq7cdf 1 osriceostigr7cdf 1 hs133xhsug 2 hs133xptenstprobe 2 hs133xptentrezgcdf 2 hs25kresogen 2 hs95av2hsenseprobe 2 hs95av2hsentrezgprobe 1 hs95av2hsrefseq 1 hs95av2ptentrezgprobe 2 hsex10stv2hsenseprobe 1 hsex10stv2hsentrezgprobe 1 hsex10stv2hsrefseqcdf 1 hsex10stv2hsug 1 btbovinebtenseprobe 1 btbovinebtensgcdf 1 btbovinebtensgprobe 1 btbovinebtug 1 btbovinebtugcdf 1 btbovinebtugprobe 1 cfcanine2cfensgprobe 2 cfcanine2cfug 1 cfcanine2cfvegat 1 cfcanine2cfvegatcdf 1 dmdrosophila2dmensecdf 1 dmdrosophila2dmenseprobe 1 dmdrosophila2dmensg 1 dmdrosophila2dmensgprobe 1 dmdrosophila2dmug 1 dmdrosophila2dmugcdf 1 dmehomology 1 dmgenome1dmensgcdf 1 dmgenome1dmenstprobe 1 dmgenome1dmrefseq 1 dmgenome1dmrefseqcdf 1 dmgenome1dmugprobe 1 drosgenome1 2 drzebrafishdrense 2 drzebrafishdrensecdf 1 drzebrafishdrenseprobe 1 drzebrafishdrrefseq 1 drzebrafishdrug 1 ggchickenggensg 1 ggchickenggentrezgcdf 1 ggchickenggrefseq 1 hgug4111a 2 hs133ahsense 2 hs133ahsensecdf 1 hs133ahsug 2 hs133ahsugcdf 2 hs133ahsvegatcdf 1 hs133aptensg 2 hs133aptenstcdf 1 hs133av2hsenstcdf 1 hs133av2hsrefseqcdf 2 hs133av2hsrefseqprobe 1 hs133av2hsugcdf 2 hs133av2hsvegae 1 hsex10stv2hsense7probe 1 hsex10stv2hsensg7cdf 1 hsex10stv2hsrefseq7probe 1 hsex10stv2hsug7probe 1 hsfocushsenst7cdf 1 hsfocushsenst7probe 1 hsfocusptensg7cdf 1 mgu74bv2 2 mgu74c 3 mguatlas5k 2 mm11ksubammenseprobe 2 mm11ksubammensgcdf 1 mm11ksubammugcdf 1 mm11ksubbmmensecdf 1 mm11ksubbmmensgcdf 1 mm11ksubbmmensgprobe 1 mm11ksubbmmenst 2 mm11ksubbmmentrezgcdf 1 mm11ksubbmmrefseqprobe 1 mm11ksubbmmugcdf 1 mm24kresogen 2 mm430ammensecdf 2 rn230arnensgprobe 2 rn230arnenst 2 rn230arnenstcdf 2 rn230arnenstprobe 2 rn230arnentrezg 2 rn230arnentrezgprobe 1 rn230brnenseprobe 1 rn230brnensgcdf 1 rn230brnensgprobe 2 rn230brnrefseqprobe 2 rn230brnugcdf 2 rn230brnugprobe 1 rn230rnenstprobe 2 rn230rnentrezgcdf 2 rn230rnrefseq 2 rn230rnrefseqprobe 1 rn230rnug 2 rn34arnensgprobe 1 rn34arnenst 1 rn34arnenstcdf 1 rn34arnug 1 rnex10stv1rnensecdf 1 rnex10stv1rnentrezg 1 rnex10stv1rnrefseq 1 dmdrosophila2dmrefseq7cdf 1 dmgenome1dmensg7probe 1 dmgenome1dmenst7cdf 1 hs133ahsense7cdf 1 hs133ahsensg7probe 1 hs133ahsenst7probe 1 hs133ahsentrezg7probe 1 hs133ahsrefseq7cdf 1 hs133ahsug7cdf 1 hs133aptensg7probe 1 hs133av2hsenst7probe 1 hs133av2hsentrezg7cdf 1 hs133av2hsug7probe 1 hs133bhsentrezg7cdf 1 hs133bhsrefseq7probe 1 hs133bhsug7probe 1 hs133phsensg7cdf 1 hs133phsensg7probe 1 hs95av2hsrefseq7cdf 1 hs133xptense7cdf 1 hs95av2hsense7probe 1 hs95av2hsenst7probe 1 hs95av2hsug7cdf 1 hs133av2ptenstprobe 2 hs133av2ptentrezgprobe 1 hs133bhsensecdf 1 hs133bhsensgprobe 2 hs133bhsenstcdf 2 hs133bhsentrezgcdf 2 hs133bhsentrezgprobe 2 hs133bptensecdf 2 hs133bptensgcdf 1 hs133bptentrezgprobe 2 hs133phsensg 2 hs133phsensgcdf 1 hs133pptenst 2 hs133pptenstcdf 2 hs133xhsensecdf 2 hs133xhsensgcdf 2 rnex10stv1rnrefseqprobe 1 rnex10stv1rnugcdf 1 mm74av2mmvegat 1 hsfocushsrefseq 2 mm74cv2mmvegae 1 mm74cv2mmensgprobe 1 mm430ammenseprobe 1 mm74av1mmensg 1 mm74av1mmvegatcdf 1 hsfocusptensg 1 mm74av2mmvegaeprobe 1 hsfocushsvegagcdf 1 mm74cv2mmrefseqprobe 1 mm430mmenstcdf 1 mm74bv2mmvegat 1 mm74bv2mmugcdf 1 hsfocushsrefseqcdf 2 mm11ksubammvegaecdf 1 mamurhesusmamuense 1 mm430bmmvegagcdf 1 hs133av2hsvegatcdf 1 mm430bmmense 2 mamurhesusmamuug 1 mm430bmmentrezgcdf 1 mm74av1mmvegaeprobe 1 mm430bmmenstprobe 1 mm74av1mmenstcdf 1 mm11ksubbmmvegat 1 mm74av1mmvegaecdf 1 hsfocushsensgprobe 1 mm430bmmvegat 1 mm74cv2mmentrezgcdf 2 mm74av2mmentrezgprobe 2 mm430bmmrefseqprobe 2 mm74av1mmrefseqcdf 1 mm430a2mmenseprobe 1 mm430ammvegatcdf 1 mm74cv2mmrefseq 2 hs133bhsvegagprobe 1 mm74bv2mmrefseqcdf 1 mm74av2mmvegatprobe 1 mm430bmmvegatprobe 1 mm74cv2mmensgcdf 1 mm430a2mmvegatcdf 1 mm74bv2mmenstprobe 2 mm430bmmugprobe 2 mm74av2mmenst 2 osriceosrefseq 2 mm74bv2mmentrezg 2 mm430bmmvegag 1 mm430a2mmentrezgcdf 1 mamurhesusmamuentrezgcdf 1 mm74cv2mmvegagcdf 1 hsfocusptensgprobe 1 mm74av2mmenseprobe 2 hsfocushsenseprobe 1 mm430mmvegatprobe 1 mm74av1mmensecdf 2 mm74av1mmensgcdf 1 mm74av1mmvegae 1 mm74av2mmenstprobe 2 mm74av2mmvegagcdf 1 mm74av2mmvegag 1 mm74bv2mmvegaeprobe 1 mm74cv2mmensg 1 mm74cv2mmvegatprobe 1 PartheenMetaData 1 hsex10stv2ptenst 1 hsex10stv2ptentrezg 1 hsex10stv2ptentrezgcdf 1 hsfocushsenstcdf 1 hsfocushsenstprobe 1 hsfocusptenstprobe 2 hsfocusptentrezgcdf 1 mm430ammenstcdf 1 mm430ammrefseqcdf 2 mm430ammugprobe 2 mmex10stv1mmense 1 mmex10stv1mmensg 1 mmex10stv1mmenstprobe 1 mmex10stv1mmentrezg 1 mmex10stv1mmentrezgcdf 1 hsfocushsvegag 1 hs133phsvegaeprobe 1 mm11ksubbmmvegagprobe 1 mm430a2mmensgcdf 1 hs133av2ptensgprobe 2 hs133xhsvegagprobe 1 mm430a2mmentrezg 1 mm11ksubammvegatprobe 1 mm430ammvegagcdf 1 hsfocushsvegaecdf 1 ath1attigr7cdf 1 mm11ksubbmmvegae 1 hs133av2hsvegag 1 hs133bhsvegae 1 hs133bhsvegaecdf 1 hs133bhsvegat 1 hs133phsvegaecdf 1 hs133phsvegag 1 hs133phsvegat 1 mmex10stv1mmug 1 mmex10stv1mmugprobe 1 hs133xhsvegatcdf 1 hs133xptrefseqcdf 1 hsfocushsvegae 1 JazaeriMetaData 2 mamurhesusmamuensg 1 mm11ksubbmmvegag 1 vvgrapevvtigr 1 illuminaMousev1p1ProbeID.db 1 illuminaMousev2ProbeID.db 1 mamurhesusmamurefseqprobe 1 mamurhesusmamurefseq 1 MeSH.Eco.B.REL606.eg.db 0 MeSH.Sau.Mu50.eg.db 0 MeSH.Sau.MSSA476.eg.db 0 MeSH.Sau.ED98.eg.db 0 MeSH.Eco.UTI89.eg.db 0 MeSH.Eco.O111.H.11128.eg.db 0 MeSH.Sau.Newman.eg.db 0 MeSH.Sau.M013.eg.db 0 MeSH.Sau.MSHR1132.eg.db 0 MeSH.Sau.VC40.eg.db 0 LowMACAAnnotation 25 BSgenome.Hsapiens.UCSC.hg38 4107 TxDb.Athaliana.BioMart.plantsmart25 23 MeSH.Cre.eg.db 9 MeSH.Dya.eg.db 10 MeSH.Eco.HS.eg.db 5 MeSH.Eco.S88.eg.db 5 MeSH.Mdo.eg.db 11 MeSH.Miy.eg.db 11 MeSH.Sce.S288c.eg.db 10 MeSH.Tgo.ME49.eg.db 9 phastCons7way.UCSC.hg38 70 EnsDb.Hsapiens.v79 337 BSgenome.Btaurus.UCSC.bosTau8 30 MeSH.Eco.CFT073.eg.db 6 MeSH.Ani.FGSC.eg.db 11 MeSH.Eco.O157.H7.EDL933.eg.db 5 EnsDb.Rnorvegicus.v75 25 MeSH.Bfl.eg.db 11 MeSH.Cfa.eg.db 10 MafDb.ALL.wgs.phase3.release.v5a.20130502 5 MeSH.Mmu.eg.db 13 MeSH.Oni.eg.db 9 MeSH.Ame.eg.db 13 MeSH.Oan.eg.db 11 MeSH.Bsu.TUB10.eg.db 5 MeSH.Dme.eg.db 12 SNPlocs.Hsapiens.dbSNP144.GRCh37 929 int.domine.db 4 org.Mm.ref.db 1 org.Mm.ipi.db 1 org.Rn.cross.db 2 spohomology 2 vvgrapevvtigr7cdf 1 rnex10stv1rnrefseq7cdf 1 rn34arnentrezg7cdf 1 rn230rnense7probe 1 rn230brnrefseq7cdf 1 rnex10stv1rnug7probe 1 rnex10stv1rnensg7cdf 1 rn34arnentrezg7probe 1 rn230brnensg7cdf 1 rn230brnug7cdf 1 rn34arnensg7cdf 1 rn230arnentrezg7probe 1 rn230arnenst7cdf 1 rn230arnensg7probe 1 rn230arnug7probe 1 prt440acdf 1 prt440scdf 1 mm430a2mmrefseqcdf 1 hs133av2ptentrezg 2 mu11ksuba 2 ath1attigr7probe 1 mm11ksubammentrezg7probe 1 mm11ksubammug7probe 1 mm11ksubbmmenst7cdf 1 mm430ammensg7cdf 1 mm430ammensg7probe 1 mm430ammentrezg7probe 1 mm430bmmentrezg7probe 1 mm430bmmug7probe 1 mm430mmense7probe 1 mm430mmensg7probe 1 mm430mmenst7probe 1 mm74av1mmensg7probe 1 mm74av1mmentrezg7cdf 1 mm74av1mmrefseq7cdf 1 mm74av2mmentrezg7cdf 1 mm74av2mmentrezg7probe 1 mm74av2mmrefseq7probe 1 mm74av2mmug7probe 1 mmex10stv1mmenst7probe 1 mmex10stv1mmug7cdf 1 atgenomeatrefseqcdf 1 atgenomeattairprobe 1 atgenomeattigrcdf 1 ath1attigrprobe 1 ggchickenggense7probe 1 ggchickenggug7cdf 1 drzebrafishdrrefseq7probe 1 drzebrafishdrug7probe 1 h10kcod 2 hcg110 2 mu11ksubb 3 mu19ksuba 2 mu19ksubc 2 omyhomology 3 osahomology 3 pfahomology 2 hs133xhsentrezg 2 hs133xhsentrezgcdf 2 hs133xhsrefseq 1 hs133xhsrefseqprobe 1 hs133xhsugcdf 1 hs133xhsugprobe 2 hs133xptenseprobe 1 hs133xptensg 2 hs133xptensgcdf 2 hs133xptenst 2 hs133xptenstcdf 2 hs133xptentrezg 2 hs95av2hsenst 1 hs95av2hsenstprobe 1 hs95av2hsugcdf 2 hs95av2hsugprobe 1 hs95av2ptensecdf 2 hs95av2ptenseprobe 1 hsex10stv2hsensgprobe 1 hsex10stv2hsenst 1 hsex10stv2hsenstcdf 1 btbovinebtensecdf 1 btbovinebtentrezgcdf 1 btbovinebtrefseq 1 cfcanine2cfensecdf 1 cfcanine2cfenseprobe 1 cfcanine2cfensgcdf 1 cfcanine2cfenst 1 cfcanine2cfenstcdf 1 cfcanine2cfentrezgcdf 1 chicken 1 dmdrosophila2dmensgcdf 1 dmdrosophila2dmenstcdf 1 dmdrosophila2dmenstprobe 1 dmgenome1dmensecdf 1 dmgenome1dmenstcdf 2 dmgenome1dmug 1 drzebrafishdrensg 1 drzebrafishdrenst 1 drzebrafishdrenstcdf 1 drzebrafishdrentrezgcdf 1 drzebrafishdrrefseqprobe 2 drzebrafishdrvegatcdf 1 drzebrafishdrvegatprobe 1 ggchickenggenseprobe 1 ggchickenggenst 1 ggchickenggrefseqcdf 1 ggchickenggrefseqprobe 1 ggchickenggugprobe 1 hgubeta7 2 hgug4101a 3 hgug4110b 2 hgug4112a 2 hs133ahsensg 2 hs133ahsenstprobe 2 hs133ahsrefseq 1 hs133ahsvegae 1 hs133ahsvegag 1 hs133ahsvegagcdf 1 hs133ahsvegatprobe 1 hs133aptense 2 hs133aptensecdf 2 hs133aptenseprobe 2 hs133aptenst 1 hs133aptentrezgcdf 1 hs133aptrefseq 1 hs133aptrefseqprobe 1 hs133av2hsensecdf 2 hs133av2hsensgcdf 1 hs133av2hsensgprobe 1 hs133av2hsrefseq 1 hs133av2hsvegaecdf 1 HsapiensGenome.hg18 1 hsex10stv2ptense7cdf 1 hsex10stv2ptense7probe 1 hsfocushsense7cdf 1 hsfocushsentrezg7probe 1 hsfocusptensg7probe 1 hu35ksubd 3 mgu74cv2 2 mgrhomology 2 mgu74a 3 mgu74b 3 mm11ksubammense 1 mm11ksubammensg 1 mm11ksubammenst 1 mm11ksubammenstprobe 2 mm11ksubbmmense 1 mm11ksubbmmenseprobe 2 mm11ksubbmmensg 2 mm11ksubbmmenstprobe 2 mm11ksubbmmentrezg 2 mm11ksubbmmrefseq 2 mm11ksubbmmugprobe 1 mm430ammense 2 rn230arnentrezgcdf 2 rn230arnug 2 rn230arnugcdf 2 rn230brnensecdf 2 rn230brnensg 2 rn230brnentrezgcdf 2 rn230brnug 2 rn230rnense 1 rn230rnenseprobe 1 rn230rnensg 2 rn230rnensgcdf 1 rn230rnenstcdf 2 rn230rnrefseqcdf 2 rn34arnense 1 rn34arnentrezg 1 rn34arnrefseqprobe 1 rnex10stv1rnense 1 rnex10stv1rnenseprobe 1 rnex10stv1rnensg 1 rnex10stv1rnensgprobe 1 rnex10stv1rnentrezgcdf 1 rnex10stv1rnrefseqcdf 1 dmdrosophila2dmensg7cdf 1 cfcanine2cfentrezg7cdf 1 cfcanine2cfrefseq7probe 1 cfcanine2cfug7probe 1 dmdrosophila2dmrefseq7probe 1 DmelanogasterGenome.dm2 1 drzebrafishdrensg7probe 1 hs133ahsense7probe 1 hs133ahsensg7cdf 1 hs133aptensg7cdf 1 hs133av2ptense7probe 1 hs133bhsensg7cdf 1 hs133bhsensg7probe 1 hs133bhsenst7probe 1 hs133bhsug7cdf 1 hs133bptense7cdf 1 hs133xhsensg7cdf 1 hs133xhsentrezg7cdf 1 hs133xhsrefseq7cdf 1 hs95av2hsense7cdf 1 hs95av2hsensg7probe 1 hs95av2ptense7probe 1 hs133av2ptenstcdf 1 hs133bhsenstprobe 2 hs133bptense 2 hs133bptensg 2 hs133bptenst 1 hs133bptenstcdf 2 hs133bptentrezgcdf 2 hs133phsensecdf 1 hs133phsenstcdf 1 hs133phsentrezgprobe 1 hs133phsrefseqcdf 2 hs133phsugprobe 2 hs133pptentrezg 1 hs133pptentrezgcdf 2 hs133xhsensg 1 hs133xhsensgprobe 1 hs133xhsenst 2 hs133xhsenstcdf 2 rnex10stv1rnugprobe 1 mm74cv2mmvegaeprobe 1 mm430a2mmense 1 rn230arnense 2 mm74cv2mmentrezgprobe 1 mm11ksubbmmvegatprobe 1 mm430a2mmenstcdf 1 hsfocushsugprobe 2 hs133av2hsvegatprobe 1 mm430mmvegaecdf 1 mm74cv2mmug 1 mm74cv2mmenstcdf 2 mm430bmmvegae 1 mm430bmmrefseq 2 hsfocusptensgcdf 1 mm430a2mmvegat 1 hs133phsvegatprobe 1 hsfocushsensgcdf 1 mm430bmmvegatcdf 1 mm430mmvegaeprobe 1 mm430ammvegatprobe 1 mm430bmmentrezgprobe 2 mm430mmrefseq 2 mm74av2mmensg 2 mm74av1mmvegagprobe 1 mm74cv2mmrefseqcdf 1 hs133bhsvegatprobe 1 mm74av2mmrefseqcdf 1 osriceosrefseqcdf 2 mm74bv2mmensecdf 1 BSgenome.Tguttata.UCSC.taeGut2 23 mm430a2mmenst 1 mm430ammensg 1 mm430ammensgcdf 2 hs133av2ptenseprobe 1 mm430bmmentrezg 2 mm430mmenst 2 mm430mmentrezg 2 mm74av1mmenst 1 mm430bmmensg 1 ath1atrefseq7probe 1 mm430bmmvegaeprobe 1 mamurhesusmamurefseqcdf 1 mamurhesusmamuenstcdf 1 mm430a2mmentrezgprobe 1 atgenomeatrefseq7cdf 1 mm11ksubammvegat 1 mm430mmug 2 mm430mmugprobe 2 mm430mmvegag 1 mm74av1mmenseprobe 2 mm74av1mmvegagcdf 1 mm74av1mmvegatprobe 1 mm74av2mmense 2 mm74av2mmvegae 1 mm74av2mmvegatcdf 1 mm74bv2mmvegae 1 mm74bv2mmvegagprobe 1 mm74bv2mmvegatprobe 1 mm74cv2mmenstprobe 1 mm74cv2mmvegaecdf 1 mm74cv2mmvegatcdf 1 Mu15v1 2 Mu22v3 1 hsex10stv2hsugprobe 1 hsex10stv2ptenseprobe 1 hsfocushsensg 1 hsfocushsentrezgprobe 2 hsfocusptenst 2 hsfocusptenstcdf 2 hsfocusptentrezgprobe 1 mm430ammentrezgprobe 1 mm430ammug 2 mm430mmensgprobe 1 mmex10stv1mmenseprobe 1 mmex10stv1mmensgcdf 1 mmex10stv1mmensgprobe 1 mmex10stv1mmenstcdf 1 greengenes13.5MgDb 6 rn230arnensgcdf 1 hs95av2hsvegatprobe 1 mm430ammvegag 1 mm430a2mmvegag 1 hs133phsvegagprobe 1 hs133av2ptensecdf 1 hs95av2ptrefseq 1 ath1atrefseq7cdf 1 cfcanine2cfense7probe 1 hs133pptrefseqprobe 1 hs95av2hsvegaeprobe 1 hs133bhsvegaeprobe 1 mm430a2mmensgprobe 1 hcgi12k 1 hs133bhsvegag 1 hs133bhsvegagcdf 1 hs133bhsvegatcdf 1 hs133bptrefseqcdf 1 hs133phsvegagcdf 1 rn230arnenseprobe 2 mmex10stv1mmrefseqcdf 1 mmex10stv1mmrefseqprobe 1 mmex10stv1mmugcdf 1 hs95av2hsvegae 1 hs95av2hsvegag 1 hs95av2hsvegagcdf 1 hs95av2ptrefseqcdf 1 hsfocusptrefseqcdf 1 HuO22 2 mamurhesusmamuenstprobe 1 mamurhesusmamuentrezg 1 mamurhesusmamuentrezgprobe 1 mm11ksubbmmvegaeprobe 1 mm430a2mmvegagprobe 1 mm430ammvegat 2 osriceostigrprobe 1 illuminaHumanv1ProbeID.db 1 illuminaMousev1ProbeID.db 1 MeSH.Eco.O157.H7.TW14359.eg.db 0 MeSH.Sau.Mu3.eg.db 0 MeSH.Bsu.W23.eg.db 0 MeSH.Bsu.RONN1.eg.db 0 MeSH.Eco.SMS35.eg.db 0 MeSH.Eco.SE11.eg.db 0 MeSH.Eco.O26.H11.11368.eg.db 0 MeSH.Sau.MW2.eg.db 0 TxDb.Dmelanogaster.UCSC.dm6.ensGene 308 TxDb.Celegans.UCSC.ce11.refGene 47 LymphoSeqDB 176 MafDb.ExAC.r0.3.1.snvs.hs37d5 2 hta20transcriptcluster.db 57 TxDb.Mmulatta.UCSC.rheMac8.refGene 22 alternativeSplicingEvents.hg19 24 fitCons.UCSC.hg19 23 BSgenome.Ggallus.UCSC.galGal5 24 clariomshumanhttranscriptcluster.db 26 pd.clariom.s.rat.ht 22 BSgenome.Celegans.UCSC.ce11 159 TxDb.Rnorvegicus.UCSC.rn6.refGene 138 TxDb.Cfamiliaris.UCSC.canFam3.refGene 24 FlowSorted.CordBloodNorway.450k 1 TxDb.Ptroglodytes.UCSC.panTro4.refGene 21 MafDb.1Kgenomes.phase3.hs37d5 121 BSgenome.Mmulatta.UCSC.rheMac8 99 clariomdhumanprobeset.db 52 MafDb.ESP6500SI.V2.SSA137.GRCh38 7 BSgenome.Ptroglodytes.UCSC.panTro5 26 mta10transcriptcluster.db 24 IlluminaHumanMethylation27kanno.ilmn12.hg19 41 EnsDb.Hsapiens.v86 2994 pd.clariom.s.mouse.ht 23 clariomsrathttranscriptcluster.db 21 miRBaseVersions.db 178 IlluminaHumanMethylationEPICmanifest 1194 TxDb.Mmulatta.UCSC.rheMac3.refGene 21 TxDb.Btaurus.UCSC.bosTau8.refGene 25 TxDb.Drerio.UCSC.danRer10.refGene 111 MafDb.ExAC.r0.3.1.nonTCGA.snvs.hs37d5 2 MafDb.1Kgenomes.phase1.hs37d5 189 clariomsmousehttranscriptcluster.db 24 clariomsmousetranscriptcluster.db 31 mta10probeset.db 29 rta10probeset.db 22 pd.clariom.s.rat 23 clariomsrattranscriptcluster.db 24 lumiMouseIDMapping.db 1 IlluminaHumanMethylationEPICanno.ilm10b2.hg19 327 TxDb.Ggallus.UCSC.galGal4.refGene 22 TxDb.Sscrofa.UCSC.susScr3.refGene 22 BSgenome.Vvinifera.URGI.IGGP8X 22 clariomshumantranscriptcluster.db 34 hta20probeset.db 28 MafDb.ESP6500SI.V2.SSA137.hs37d5 6 clariomdhumantranscriptcluster.db 46 pd.clariom.s.mouse 45 pd.clariom.s.human 74 rta10transcriptcluster.db 21 pd.clariom.d.human 69 pd.clariom.s.human.ht 33 MafDb.gnomAD.r2.0.1.hs37d5 6 MafDb.gnomADex.r2.0.1.hs37d5 5 IlluminaHumanMethylationEPICanno.ilm10b4.hg19 1248 GenomeInfoDbData 54881 SNPlocs.Hsapiens.dbSNP150.GRCh38 57 AHEnsDbs 29 alternativeSplicingEvents.hg38 24 SNPlocs.Hsapiens.dbSNP149.GRCh38 50 TxDb.Ggallus.UCSC.galGal5.refGene 45 IlluminaHumanMethylationEPICanno.ilm10b3.hg19 38 AHCytoBands 18 MafDb.ExAC.r1.0.hs37d5 94 MafDb.ExAC.r1.0.nonTCGA.hs37d5 24 MafDb.TOPMed.freeze5.hg38 28 MafDb.1Kgenomes.phase1.GRCh38 25 MafDb.gnomADex.r2.0.1.GRCh38 4 MafDb.TOPMed.freeze5.hg19 25 TxDb.Sscrofa.UCSC.susScr11.refGene 28 TxDb.Ptroglodytes.UCSC.panTro5.refGene 18 MafDb.gnomAD.r2.1.hs37d5 33 ribosomaldatabaseproject11.5MgDb 4 silva128.1MgDb 4 BSgenome.Ptroglodytes.UCSC.panTro6 24 LRBase.Xtr.eg.db 4 JASPAR2018 399 geneplast.data.string.v91 37 LRBase.Mmu.eg.db 4 BSgenome.Carietinum.NCBI.v1 23 LRBase.Cel.eg.db 3 LRBase.Ath.eg.db 4 LRBase.Dre.eg.db 5 LRBase.Bta.eg.db 4 LRBase.Rno.eg.db 4 org.hs.eg.db 2 MafDb.gnomAD.r2.0.1.GRCh38 5 MafDb.1Kgenomes.phase3.GRCh38 56 MafDb.ExAC.r1.0.nonTCGA.GRCh38 29 BSgenome.Sscrofa.UCSC.susScr11 48 SNPlocs.Hsapiens.dbSNP151.GRCh38 12 LRBase.Hsa.eg.db 5 MafDb.gnomADex.r2.1.hs37d5 97 LRBase.Pab.eg.db 4 LRBase.Dme.eg.db 4 BSgenome.Aofficinalis.NCBI.V1 22 LRBase.Ssc.eg.db 4 LRBase.Gga.eg.db 4 MafDb.ExAC.r1.0.GRCh38 39 EuPathDB 23 go.db 1 rat2302frmavecs 22 BSgenome.Btaurus.UCSC.bosTau9 44 TxDb.Celegans.UCSC.ce11.ensGene 141 BSgenome.Mdomestica.UCSC.monDom5 21 BSgenome.Cjacchus.UCSC.calJac3 21 MafDb.gnomADex.r2.1.GRCh38 22 TxDb.Btaurus.UCSC.bosTau9.refGene 26 TxDb.Ggallus.UCSC.galGal6.refGene 25 BSgenome.Drerio.UCSC.danRer11 63 BSgenome.Ggallus.UCSC.galGal6 40 ENCODExplorerData 29 TxDb.Drerio.UCSC.danRer11.refGene 35 GenomicState 97 TxDb.Ptroglodytes.UCSC.panTro6.refGene 19 TxDb.Mmulatta.UCSC.rheMac10.refGene 108 BSgenome.Mmulatta.UCSC.rheMac10 155 hpAnnot 22 MafDb.gnomAD.r2.1.GRCh38 50 org.Mxanthus.db 30 MafDb.gnomAD.r3.0.GRCh38 6 BANDITS 0 MeSH.Eca.eg.db 2 CluMSID 0 waddR 0 BiocGenerics 18 AnnotationHub 3 BiocInstaller 1 Biostrings 16 DNAcopy 1 edgeR 12 ensembldb 4 gage 0 graph 1 graphics 1 pathview 1 rtracklayer 3 XVector 2 rstudio 0 S4Vectors 10 sitePath 0 GenomeInfoDb 20 ggtree 13 string 0 metaboliteIDmapping 194 geneLenDataBase 10 biomaRt 2 geneplast.data 43 TxDb.Mmusculus.UCSC.mm39.refGene 122 BSgenome.Creinhardtii.JGI.v5.6 26 CATALYST 1 universalmotif 1 KEGGREST 10 methods 1 multtest 1 affyio 1 compiler 1 cummeRbund 0 geneplotter 1 GenomicAlignments 4 GenomicRanges 5 KEGGgraph 1 NOISeq 1 splines 1 stats4 1 SummarizedExperiment 4 tools 1 utils 1 VariantAnnotation 1 vsn 1 DEXICA 0 vcfR 2 phastCons30way.UCSC.hg38 18 EpiTxDb.Sc.sacCer3 20 BSgenome.Dvirilis.Ensembl.dvircaf1 18 BSgenome.Ppaniscus.UCSC.panPan1 20 BSgenome.Ppaniscus.UCSC.panPan2 27 TxDb.Rnorvegicus.UCSC.rn6.ncbiRefSeq 18 BiocWorkflowTools 0 BiocSklearn 0 ATACseqQC 1 cliqueMS 1 synergyfinder 0 tradeSeq 1 coMET 0 limma 30 annotate 2 biovizBase 1 datasets 1 DESeq 0 DESeq2 6 gdsfmt 1 grid 1 Rsamtools 4 SeqArray 0 SeqVarTools 0 stats 1 zlibbioc 5 rlang 501 EpiTxDb.Hs.hg38 57 MafH5.gnomAD.r3.0.GRCh38 4 EpiTxDb.Mm.mm10 19 base 1 seqCAT 0 muscat 1 JASPAR2020 1752 facets 0 BSgenome.Amellifera.NCBI.AmelHAv3.1 20 CancerSubtypes 0 CellMixS 0 CEMiTool 0 ChAMP 1 genefilter 2 affy 1 AnnotationDbi 23 Biobase 10 BiocParallel 17 BSgenome 3 GenomeGraphs 0 GenomicFeatures 13 grDevices 1 Gviz 2 IRanges 20 interactiveDisplayBase 1 parallel 1 preprocessCore 1 Rgraphviz 1 Ringo 1 tcltk 1 AHWikipathwaysDbs 20 AHMeSHDbs 28 Orthology.eg.db 135 htrat230pm.db 18 htmg430pm.db 20 htmg430a.db 18 chromhmmData 65 BSgenome.Mmusculus.UCSC.mm39 146 excluderanges 94 TxDb.Cfamiliaris.UCSC.canFam4.refGene 17 ichorCNA 1 TxDb.Hsapiens.UCSC.hg38.refGene 86 htmg430b.db 17 BSgenome.Hsapiens.UCSC.hg38.dbSNP151.minor 28 BSgenome.Hsapiens.UCSC.hg38.dbSNP151.major 29 CTCF 28 karyoploteR 1 synaptome.db 30 KaryoploteR 0 ontoProcData 18 synaptome.data 36 GeneSummary 29 u 0 AHPathbankDbs 21 AHPubMedDbs 25 gwascatData 16 hthgu133pluspm.db 25 hthgu133plusb.db 17 BSgenome.Rnorvegicus.UCSC.rn7 117 TxDb.Rnorvegicus.UCSC.rn7.refGene 110 scAnnotatR.models 17 kegg.db 1 AHLRBaseDbs 24 MafH5.gnomAD.v3.1.1.GRCh38 6 htratfocus.db 17 hthgu133plusa.db 18 TxDb.Athaliana.BioMart.plantsmart51 32 rGenomeTracksData 51 TxDb.Cfamiliaris.UCSC.canFam5.refGene 16 p 0 JASPAR2022 261 BSgenome.CneoformansVarGrubiiKN99.NCBI.ASM221672v1 18 BSgenome.Cjacchus.UCSC.calJac4 37 UCSCRepeatMasker 22 BSgenome.Gmax.NCBI.Gmv40 21 snow 13 renv 145 SNPlocs.Hsapiens.dbSNP155.GRCh37 910 ComplexHeatmap 14 gmp 19 caret 21 gert 121 farver 173 mutoss 9 SeuratObject 47 ALL 10 aws.s3 6 ash 6 fds 6 reticulate 95 patchwork 95 posterior 13 callr 267 dtplyr 28 cluster 96 httr 122 tinytex 425 processx 303 ps 355 igraph 205 broom 130 rvest 180 modelr 32 readxl 62 vctrs 246 Rcpp 384 TSP 20 iterators 9 sass 334 commonmark 253 DBI 379 locfit 110 ggplot2 389 RCurl 225 data.table 401 dendextend 36 digest 461 magrittr 17 dplyr 203 generics 23 R.filesets 8 aroma.core 8 shiny 339 admisc 12 RcppZiggurat 6 RcppHNSW 32 egg 6 NMF 15 reldist 8 decoupleR 1 shinyFiles 12 pRolocdata 9 shinypanel 6 Matrix.utils 1 Matching 3 crrri 0 DelayedArray 6 minpack.lm 5 globaltest 0 quantsmooth 1 mzR 1 ggbio 1 sm 1 Rhdf5lib 3 MassSpecWavelet 1 gcrma 1 ShortRead 1 affycoretools 1 derfinderHelper 0 AnnotationFilter 1 tximport 1 ALDEx2 1 progressr 45 ggfun 79 distributional 17 gargle 46 lintr 113 paws.compute 83 utf8 206 rstan 15 workflows 14 tidygraph 45 graphlayouts 65 RcppEigen 208 cachem 316 foreign 66 nnet 46 rsvd 9 filelock 90 purrr 108 minqa 121 babelgene 6 robustbase 40 gower 16 e1071 96 inum 3 libcoin 4 pamr 1 randomForest 21 ModelMetrics 2 dimRed 1 openxlsx 80 brave 0 xgboost 129 C50 1 Ckmeans.1d.dp 0 Lahman 1 NeuralNetTools 0 ParamHelpers 1 GWASExactHW 6 mixsqp 20 WGCNA 14 RWiener 0 RcppTOML 18 aldvmm 1 ape 55 bdsmatrix 16 BBmisc 1 Brobdingnag 1 Bioconductor 1 BiocIO 2 testthat 315 fontawesome 99 spatstat.sparse 32 tune 16 optparse 46 pingr 18 pool 12 segmented 34 config 24 gaston 1 shinythemes 2 fastmap 220 prettyunits 156 ellipsis 11 ggExtra 7 dae 1 superheat 0 adegenet 1 graphql 1 png 47 SBGNview.data 0 shinyhelper 6 mlr3 3 pander 4 party 75 paws 16 pryr 12 bigparallelr 0 brglm 1 modeltools 1 fitdistrplus 29 lsei 1 ica 4 tsne 2 StanHeaders 19 ivpack 0 km.ci 2 styler 62 kernlab 42 Rtsne 40 rex 3 fields 7 maps 14 spatstat.core 13 quantreg 85 benchmarkme 1 dbscan 8 magick 26 pdist 1 ragg 259 spatial 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GPArotation 8 mrgmisc 1 eha 1 mrgvalprep 1 jpeg 15 juicyjuice 0 gap 1 bigD 6 RcppDE 0 nanotime 2 rmutil 1 tidyvpc 1 RApiDatetime 1 slickR 0 survivalROC 1 nlmixr2lib 1 nlmixr2est 1 gamlss 4 webfakes 1 osqp 3 log4r 5 msm 8 modelenv 3 NMcalc 1 XLConnect 1 phyclust 1 infercnv 1 SingleCelLExperiment 0 BSgenome.Hsapiens.UCSC.mm10 0 motifmatchr 2 bayestestR 11 iml 1 dparser 1 gsDesign 1 fixest 1 JuliaCall 0 ggRandomForests 0 mlr 1 mapbayr 0 RefManageR 1 templater 1 scatterplot3d 10 flexclust 3 rms 5 apcluster 1 AUCell 1 dittoSeq 1 BSgenome.Mfascicularis.NCBI.6.0 23 flextable 28 pillar 46 emmeans 73 mathjaxr 2 Seurat 61 ggnewscale 66 RcppArmadillo 270 rstudioapi 159 RSQLite 212 treeio 10 haven 90 infer 15 parallelly 212 ggforce 47 reprex 87 stringr 201 stringi 410 foreach 9 bslib 396 fs 241 mgcv 261 survival 245 jsonlite 253 BH 239 withr 338 colorspace 140 heatmaply 18 seriation 43 PSCBS 6 aroma.affymetrix 8 RSpectra 65 ontologyIndex 20 ggthemes 16 ggseqlogo 17 poweRlaw 10 TFMPvalue 8 extraDistr 8 metaMA 7 SMVar 7 leidenAlg 1 dynamicTreeCut 1 PsNR 0 MultiAssayExperiment 0 vaplot 0 lixoftConnectors 0 crrry 0 SC3 1 baySeq 3 DEGseq 1 Rsubread 1 biomformat 1 ballgown 0 survcomp 1 impute 1 zip 200 gh 133 gitcreds 20 rversions 21 mailR 0 modeldata 14 parsnip 17 pracma 29 fastmatch 24 rrcov 23 rsample 22 googledrive 34 uuid 259 later 172 R6 14 scuttle 11 sitmo 8 polynom 4 curl 461 MeSHDbi 1 corrplot 32 geometry 1 magic 1 backports 129 mvtnorm 139 gtools 56 caTools 22 prodlim 44 numDeriv 2 survminer 4 assertthat 2 xtable 4 markdown 106 Hmisc 47 htmlTable 41 waldo 202 diffobj 4 doParallel 6 prettydoc 1 Cairo 20 MNP 1 ChAMPdata 1 RMySQL 5 RPostgreSQL 5 TH.data 118 WeightIt 2 admiral.test 1 ATE 1 BlakerCI 0 lme4 138 pkgbuild 158 shinydashboard 4 brio 189 rprojroot 145 rstatix 22 ExploreModelMatrix 0 ggrepel 292 spatstat.data 38 pcaPP 22 parsedate 4 hierfstat 0 pegas 2 webdriver 0 lmerTest 2 svglite 34 morpheus 1 yulab.utils 78 fresh 14 R.utils 103 proxy 3 carData 3 pROC 42 paws.database 16 paws.management 16 paws.analytics 16 pls 4 beeswarm 1 robust 18 rmio 1 fit.models 1 binom 0 coin 2 classInt 28 reshape2 5 TeachingDemos 2 gam 14 slam 10 gtx 0 hardhat 56 kableExtra 26 selectr 1 questionr 1 bitops 96 rappdirs 6 CVST 1 rbibutils 41 ggplotify 26 rvcheck 4 hunspell 32 plotrix 15 rcmdcheck 4 svMisc 1 lmtest 5 clue 54 R.methodsS3 9 R.oo 76 ClusterR 1 bibtex 2 askpass 179 RCircos 0 ggpubr 24 permute 2 BiocFileCache 5 tkWidgets 0 lumi 1 Wrench 0 PureCN 0 SSPA 0 ProtGenerics 1 oligoClasses 1 RsSimulx.1 0 Rsmlx.2 0 ncdf4.1 0 flowVS 0 Rsmlx.1 0 leidenbase 13 cmprsk 4 ccaPP 1 quadprog 1 diceR 1 registry 2 RBesT 1 downloader 1 ruv 1 storr 0 creatr 0 qpdf 4 rmdformats 1 mc2d 2 rgeos 17 LiblineaR 11 listenv 70 clariomdhumantranscriptcluster 0 oligo 1 ellipse 20 xts 36 fastGHQuad 1 fastICA 38 fuzzyjoin 0 labelled 16 covr 11 densityClust 1 dials 18 rstantools 13 shinystan 1 speedglm 1 PKI 7 ROCR 2 RhpcBLASctl 2 SQUAREM 2 psych 131 qvcalc 1 ranger 18 boot 86 rio 21 rols 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scrime 5 dbplyr 237 lubridate 90 jquerylib 2 irlba 19 ExomeDepth 1 clipr 11 tzdb 52 car 35 GEOquery 1 lazyeval 2 glmnet 23 partykit 4 lava 58 DescTools 19 exactRankTests 1 labeling 146 gdata 29 DBItest 1 MatchIt 3 OncoBayes2 0 RSNNS 1 arm 5 bbmle 15 AsioHeaders 5 maptools 20 Formula 15 latticeExtra 10 pcaExplorer 0 apeglm 1 systemfonts 317 sys 116 seqminer 12 pbapply 32 paws.application.integration 16 slider 18 seqinr 17 colourpicker 9 credentials 59 jose 2 poppr 1 shinytest 3 ssh 3 asremlPlus 1 rsvg 4 RIdeogram 0 qpcR 0 ghql 0 rhdf5 3 shinydashboardPlus 18 bsplus 1 vroom 146 class 41 shinyjqui 1 DMRcatedata 1 strucchange 1 paws.networking 16 paws.machine.learning 16 paws.customer.engagement 16 rapidjsonr 1 bigutilsr 0 profileModel 1 timeDate 48 coda 25 rjson 46 GetoptLong 4 cowplot 115 argparse 13 rly 0 geoR 0 splancs 10 glmnetUtils 11 gmodels 2 lambda.r 2 GlobalOptions 2 sandwich 19 usethis 170 downlit 112 goftest 2 deldir 59 VAM 1 pkgdown 137 textshaping 198 idr 0 VennDiagram 2 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