Package: friends.test
Type: Package
Title: In a matrix, we look for columns that are friendly to a row
Version: 0.99.18
Date: 2026-01-11
Encoding: UTF-8
Authors@R: c(
    person("Alexandra","Suvorikova",email = "a.suvorikova@gmail.com",role=c("aut","ctb")),
    person("Alexey","Kroshnin",email = "kroshnin@wias-berlin.de",role=c("aut","ctb")),
    person("Dmitrijs","Lvovs",email = "dmitrijs.lvovs@gmail.com",role=c("aut","ctb")),
    person("Vera","Mukhina",email = "atgc@vigg.ru",role=c("aut","ctb")),
    person("Andrey A.","Mironov", email="mironov@bioinf.fbb.msu.ru",role=c("aut","ctb")),
    person("Ludmila","Danilova", email="ludmila.danilova@gmail.com",role=c("aut","ctb")),
    person("Alexander","Favorov", email = "favorov@sensi.org", role=c("aut","cre"),
        comment=c(ORCID="0000-0003-2595-1091"))
    )
Description: We have two sets:T (rows) and C (columns) and 
    A real matrix A(t,c) that describes the strength of association 
    between each t and each c; t is an element of T and c is an element of C. 
    For each t we want to identify whether it is significantly more 
    relevant for some c's than for the remaining c's.
    If it does, those c for which the t is relevant, 
    are the t's friend. And, the t is the c's marker.
License: Artistic-2.0
LazyLoad: yes
Depends: R (>= 4.5.0)
biocViews: Annotation, StatisticalMethod
URL: https://github.com/favorov/friends.test
BugReports: https://github.com/favorov/friends.test/issues
Suggests: knitr, rmarkdown, devtools, markdown, BiocStyle, testthat,
        dplyr, msigdbr, fgsea, tibble
VignetteBuilder: knitr
Packaged: 2026-05-18 18:10:43 UTC; pkgbuild
Imports: stats, utils, data.table, purrr, cli, mirai, carrier, rtlr
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.3.3
LazyData: false
NeedsCompilation: no
Author: Alexandra Suvorikova [aut, ctb],
  Alexey Kroshnin [aut, ctb],
  Dmitrijs Lvovs [aut, ctb],
  Vera Mukhina [aut, ctb],
  Andrey A. Mironov [aut, ctb],
  Ludmila Danilova [aut, ctb],
  Alexander Favorov [aut, cre] (ORCID:
    <https://orcid.org/0000-0003-2595-1091>)
Maintainer: Alexander Favorov <favorov@sensi.org>
