Package: OmniAgeR
Title: Aging Omic Biomarkers from DNA Methylation and Transcriptomics
Version: 0.99.4
Authors@R: 
    c(person(given = "Zhaozhen",
             family = "Du",
             role = c("aut", "cre"),
             email = "duzhaozhen2022@sinh.ac.cn",
             comment = c(affiliation = "Shanghai Institute of Nutrition and Health, CAS")),
      person(given = "Andrew E.",
             family = "Teschendorff",
             role = "aut",
             email = "andrew@sinh.ac.cn",
             comment = c(affiliation = "Shanghai Institute of Nutrition and Health, CAS")),
      person("National Science Foundation of China", 
             role = "fnd", 
             comment = c(NSFC = "W2431024, 32370699, 32570775")))
Description: Provides a comprehensive suite of tools for calculating and evaluating a wide array of aging-related clocks and surrogate biomarkers from DNA methylation and transcriptomic data. 
URL: https://github.com/Duzhaozhen/OmniAgeR
BugReports: https://github.com/Duzhaozhen/OmniAgeR/issues
License: MIT + file LICENSE
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
Depends: R (>= 4.5.0)
Suggests: BiocStyle, ggplot2, ggpubr, knitr, patchwork, rmarkdown,
        testthat (>= 3.0.0)
Config/testthat/edition: 3
VignetteBuilder: knitr
Imports: dplyr, glmnet, HiBED, magrittr, preprocessCore, purrr,
        randomForest, rlang, Seurat, tidyr, BiocFileCache, methods,
        OmniAgeRData, ExperimentHub, AnnotationHub, qs2
NeedsCompilation: no
biocViews: Software, Epigenetics, DNAMethylation, Transcription,
        GeneExpression, ComparativeGenomics, Regression,
        MethylationArray, Transcriptomics
Config/roxygen2/version: 8.0.0
Packaged: 2026-05-18 11:17:16 UTC; pkgbuild
Author: Zhaozhen Du [aut, cre] (affiliation: Shanghai Institute of Nutrition
    and Health, CAS),
  Andrew E. Teschendorff [aut] (affiliation: Shanghai Institute of
    Nutrition and Health, CAS),
  National Science Foundation of China [fnd] (NSFC: W2431024, 32370699,
    32570775)
Maintainer: Zhaozhen Du <duzhaozhen2022@sinh.ac.cn>
