# Generated by roxygen2: do not edit by hand

export(Arrange_plots)
export(Execute_AUCell)
export(Execute_AUCell_parallel)
export(Execute_E_M_plot)
export(Execute_GSVA)
export(Execute_GSVA_parallel)
export(Execute_JAS)
export(Execute_JASMINE_parallel)
export(Execute_M_dimension_plot)
export(Execute_SCSE)
export(Execute_SCSE_parallel)
export(Execute_nnPCA)
export(Execute_nnPCA_parallel)
export(Execute_ssGSEA)
export(Execute_ssGSEA_parallel)
export(add_EMT_score)
export(add_EMT_score_Bulk)
export(add_EMT_score_multiple)
export(compute_Signature_score)
export(compute_Signature_score_SingleCell)
export(correlate_sample_scores)
export(data_prepare)
export(filter_gmt_by_reference)
export(plot_EMT_from_objects)
export(plot_heatmap_function)
export(predict_cluster_labels)
export(read_gmt)
export(write_gmt)
import(AUCell)
import(ExperimentHub)
import(GSA)
import(GSVA)
import(Matrix)
import(Seurat)
import(SummarizedExperiment)
import(curl)
import(data.table)
import(doParallel)
import(dplyr)
import(foreach)
import(ggplot2)
import(ggpubr)
import(nsprcomp)
import(patchwork)
import(rlang)
import(stringr)
importFrom(Seurat,GetAssayData)
importFrom(Seurat,UpdateSeuratObject)
importFrom(magrittr,"%>%")
importFrom(stats,cor)
importFrom(utils,read.delim)
