DMRsegaldata
This is the development version of DMRsegaldata; to use it, please install the devel version of Bioconductor.
Example DNAm Data for DMRsegal
Bioconductor version: Development (3.23)
Data package providing example DNA methylation files used in the DMRsegal vignette and examples. Includes a sorted beta matrix as a tab-delimited, bgzip-compressed file and a matching phenotype table. The data contains 10 healthy and 10 cancer samples, and preprocessing has already been performed on the beta values.
Author: Vasileios Lemonidis [aut, cre, cph]
, Center for Oncological Research, University of Antwerp [cph, fnd], Stichting Tegen Kanker [fnd]
Maintainer: Vasileios Lemonidis <vasileios.lemonidis at uantwerpen.be>
citation("DMRsegaldata")):
Installation
To install this package, start R (version "4.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("DMRsegaldata")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("DMRsegaldata")| Introduction to DMRsegaldata | HTML | R Script |
| Reference Manual |
Details
| biocViews | ExperimentData, ExperimentHub, Genome, MicroarrayData, SNPData, SequencingData |
| Version | 0.99.7 |
| License | GPL (>= 2) |
| Depends | R (>= 4.5.0), ExperimentHub |
| Imports | |
| System Requirements | |
| URL | https://github.com/CMG-UA/DMRsegal |
| Bug Reports | https://github.com/CMG-UA/DMRsegal/issues |
See More
| Suggests | knitr, rmarkdown, BiocStyle, ExperimentHubData |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | DMRsegaldata_0.99.7.tar.gz |
| Windows Binary (x86_64) | |
| macOS Binary (big-sur-x86_64) | |
| macOS Binary (big-sur-arm64) | |
| macOS Binary (sonoma-arm64) | |
| Source Repository | git clone https://git.bioconductor.org/packages/DMRsegaldata |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/DMRsegaldata |
| Package Short Url | https://bioconductor.org/packages/DMRsegaldata/ |
| Package Downloads Report | Download Stats |