SpacePAC
This is the development version of SpacePAC; for the stable release version, see SpacePAC.
Identification of Mutational Clusters in 3D Protein Space via Simulation.
Bioconductor version: Development (3.21)
Identifies clustering of somatic mutations in proteins via a simulation approach while considering the protein's tertiary structure.
Author: Gregory Ryslik, Hongyu Zhao
Maintainer: Gregory Ryslik <gregory.ryslik at yale.edu>
Citation (from within R, enter
citation("SpacePAC")):
Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("SpacePAC")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
| Reference Manual |
Details
| biocViews | Clustering, Proteomics, Software |
| Version | 1.45.0 |
| In Bioconductor since | BioC 2.13 (R-3.0) (11 years) |
| License | GPL-2 |
| Depends | R (>= 2.15), iPAC |
| Imports | |
| System Requirements | |
| URL |
See More
| Suggests | RUnit, BiocGenerics, rgl |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | |
| Windows Binary (x86_64) | SpacePAC_1.45.0.zip |
| macOS Binary (x86_64) | |
| macOS Binary (arm64) | |
| Source Repository | git clone https://git.bioconductor.org/packages/SpacePAC |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/SpacePAC |
| Bioc Package Browser | https://code.bioconductor.org/browse/SpacePAC/ |
| Package Short Url | https://bioconductor.org/packages/SpacePAC/ |
| Package Downloads Report | Download Stats |