TCGAWorkflowData
This package is for version 3.9 of Bioconductor; for the stable, up-to-date release version, see TCGAWorkflowData.
Data for TCGA Workflow
Bioconductor version: 3.9
This experimental data package contains 11 data sets necessary to follow the "TCGA Workflow: Analyze cancer genomics and epigenomics data using Bioconductor packages".
Author: Tiago Chedraoui Silva <tiagochst at usp.br>
Maintainer: Tiago Chedraoui Silva <tiagochst at usp.br>
citation("TCGAWorkflowData")):
Installation
To install this package, start R (version "3.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("TCGAWorkflowData")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("TCGAWorkflowData")| 'Example data for TCGA Workflow: Analyze cancer genomics and epigenomics data using Bioconductor packages' | HTML | R Script |
| Reference Manual | ||
| NEWS | Text |
Details
| biocViews | CancerData, ExperimentData, Homo_sapiens_Data, MicroarrayData |
| Version | 1.8.0 |
| License | GPL-3 |
| Depends | R (>= 3.4.0) |
| Imports | SummarizedExperiment |
| System Requirements | |
| URL | https://f1000research.com/articles/5-1542/v2 |
| Bug Reports | https://github.com/BioinformaticsFMRP/TCGAWorkflow/issues |
See More
| Suggests | knitr, rmarkdown, pander, testthat |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | TCGAWorkflow |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | TCGAWorkflowData_1.8.0.tar.gz |
| Windows Binary | |
| Mac OS X 10.11 (El Capitan) | |
| Source Repository | git clone https://git.bioconductor.org/packages/TCGAWorkflowData |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/TCGAWorkflowData |
| Package Short Url | https://bioconductor.org/packages/TCGAWorkflowData/ |
| Package Downloads Report | Download Stats |