HelloRangesData
This package is for version 3.9 of Bioconductor; for the stable, up-to-date release version, see HelloRangesData.
Data for the HelloRanges tutorial vignette
Bioconductor version: 3.9
Provides the data that were used in the bedtools tutorial by Aaron Quinlan (http://quinlanlab.org/tutorials/bedtools/bedtools.html). Includes a subset of the DnaseI hypersensitivity data from "Maurano et al. Systematic Localization of Common Disease-Associated Variation in Regulatory DNA. Science. 2012. Vol. 337 no. 6099 pp. 1190-1195." The rest of the tracks were originally downloaded from the UCSC table browser. See the HelloRanges vignette for a port of the bedtools tutorial to R.
Author: Michael Lawrence
Maintainer: Michael Lawrence <michafla at gene.com>
citation("HelloRangesData")):
Installation
To install this package, start R (version "3.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("HelloRangesData")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("HelloRangesData")| HelloRanges Example Data | R Script | |
| Reference Manual |
Details
| biocViews | ExperimentData, SequencingData |
| Version | 1.10.0 |
| License | GPL (>= 2) |
| Depends | |
| Imports | |
| System Requirements | |
| URL |
See More
| Suggests | BiocStyle |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | HelloRanges, plyranges |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | HelloRangesData_1.10.0.tar.gz |
| Windows Binary | |
| Mac OS X 10.11 (El Capitan) | |
| Source Repository | git clone https://git.bioconductor.org/packages/HelloRangesData |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/HelloRangesData |
| Package Short Url | https://bioconductor.org/packages/HelloRangesData/ |
| Package Downloads Report | Download Stats |