rexposome
This package is for version 3.9 of Bioconductor; for the stable, up-to-date release version, see rexposome.
Exposome exploration and outcome data analysis
Bioconductor version: 3.9
Package that allows to explore the exposome and to perform association analyses between exposures and health outcomes.
Author: Carles Hernandez-Ferrer [aut, cre], Juan R. Gonzalez [aut]
Maintainer: Carles Hernandez-Ferrer <carles.hernandez at isglobal.org>
citation("rexposome")):
Installation
To install this package, start R (version "3.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("rexposome")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("rexposome")| Dealing with Multiple Imputations | HTML | R Script |
| Exposome Data Analysis | HTML | R Script |
| Reference Manual | ||
| LICENSE | Text |
Details
| biocViews | BiologicalQuestion, BiomedicalInformatics, Classification, Clustering, DataImport, DataRepresentation, ExperimentalDesign, Infrastructure, MultipleComparison, Software |
| Version | 1.6.0 |
| In Bioconductor since | BioC 3.6 (R-3.4) (6.5 years) |
| License | MIT + file LICENSE |
| Depends | R (>= 3.5), Biobase |
| Imports | methods, utils, stats, lsr, FactoMineR, stringr, circlize, corrplot, ggplot2, reshape2, pryr, S4Vectors, imputeLCMD, scatterplot3d, glmnet, gridExtra, grid, Hmisc, gplots, gtools, scales, lme4, grDevices, graphics, ggrepel, mice |
| System Requirements | |
| URL |
See More
| Suggests | mclust, flexmix, testthat, BiocStyle, knitr, rmarkdown |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | omicRexposome |
| Suggests Me | brgedata |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | rexposome_1.6.0.tar.gz |
| Windows Binary | rexposome_1.6.0.zip |
| Mac OS X 10.11 (El Capitan) | rexposome_1.6.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/rexposome |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/rexposome |
| Bioc Package Browser | https://code.bioconductor.org/browse/rexposome/ |
| Package Short Url | https://bioconductor.org/packages/rexposome/ |
| Package Downloads Report | Download Stats |
| Old Source Packages for BioC 3.9 | Source Archive |